RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 ZWILCHQ9H900 591 aa4.28□□□□□ -1.72
PTPRK-210ENST00000415055 SYTL2Q9HCH5 934 aa4.28□□□□□ -1.72
PTPRK-210ENST00000415055 ADAM22Q9P0K1 906 aa4.28□□□□□ -1.72
PTPRK-210ENST00000415055 ABI3Q9P2A4 366 aa4.28□□□□□ -1.72
PTPRK-210ENST00000415055 DHCR7Q9UBM7 475 aaKnown RBP4.28□□□□□ -1.72
PTPRK-210ENST00000415055 PCSK1NQ9UHG2 260 aa4.28□□□□□ -1.72
PTPRK-210ENST00000415055 HOOK1Q9UJC3 728 aaKnown RBP4.28□□□□□ -1.72
PTPRK-210ENST00000415055 HAO1Q9UJM8 370 aa4.28□□□□□ -1.72
PTPRK-210ENST00000415055 PCDHGB4Q9UN71 923 aa4.28□□□□□ -1.72
PTPRK-210ENST00000415055 DHDHQ9UQ10 334 aa4.28□□□□□ -1.72
PTPRK-210ENST00000415055 RPH3AQ9Y2J0 694 aaPredicted RBP4.28□□□□□ -1.72
PTPRK-210ENST00000415055 MEMO1Q9Y316 297 aa4.28□□□□□ -1.72
PTPRK-210ENST00000415055 COX11Q9Y6N1 276 aa4.28□□□□□ -1.72
PTPRK-210ENST00000415055 SESN1Q9Y6P5 492 aa4.28□□□□□ -1.72
PTPRK-210ENST00000415055 SCN3AQ9NY46 2000 aa4.28□□□□□ -1.73
PTPRK-210ENST00000415055 ABCA1O95477 2261 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 HEATR5BQ9P2D3 2071 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 LOC100509620A0A075B734 347 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 NKX2-6A6NCS4 301 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 OR6C68A6NDL8 312 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 GOLGA6L4A6NEF3 574 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 EIF3CLB5ME19 914 aaKnown RBP4.27□□□□□ -1.73
PTPRK-210ENST00000415055 GPR89AB7ZAQ6 455 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 CHUKO15111 745 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 ZNHIT1O43257 154 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 VEGFDO43915 354 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 HNRNPCL1O60812 293 aaKnown RBP4.27□□□□□ -1.73
PTPRK-210ENST00000415055 PAGE4O60829 102 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 IPO7O95373 1038 aaKnown RBP4.27□□□□□ -1.73
PTPRK-210ENST00000415055 SERPINC1P01008 464 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 PIRTP0C851 137 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 GPR89BP0CG08 455 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 NR2F6P10588 404 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 UGT1A4P22310 534 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 MMP11P24347 488 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 NDUFS1P28331 727 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 PPP1R2P41236 205 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 NSFP46459 744 aaKnown RBP4.27□□□□□ -1.73
PTPRK-210ENST00000415055 TNFSF10P50591 281 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 TERF1P54274 439 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 AIF1P55008 147 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 PPP2R2BQ00005 443 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 PSG6Q00889 435 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 OLIG2Q13516 323 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 PKP1Q13835 747 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 NFE2L1Q14494 772 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 SYCP1Q15431 976 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 INAQ16352 499 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 HIST2H2ACQ16777 129 aaPredicted RBP4.27□□□□□ -1.73
PTPRK-210ENST00000415055 CA9Q16790 459 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 TPD52L1Q16890 204 aaPredicted RBP4.27□□□□□ -1.73
PTPRK-210ENST00000415055 ZNF789Q5FWF6 425 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 TFDP3Q5H9I0 405 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 C1QTNF12Q5T7M4 302 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 GARNL3Q5VVW2 1013 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 KAZNQ674X7 775 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 KIRREL2Q6UWL6 708 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 WASH2PQ6VEQ5 465 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 PRSS58Q8IYP2 241 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 C17orf53Q8N3J3 647 aaPredicted RBP4.27□□□□□ -1.73
PTPRK-210ENST00000415055 PLD5Q8N7P1 536 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 FAM47BQ8NA70 645 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 SETD9Q8NE22 299 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 AGAP11Q8TF27 550 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 TMEM170AQ8WVE7 144 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 ZFPM2Q8WW38 1151 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 LCN9Q8WX39 176 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 RMND5BQ96G75 393 aaPredicted RBP4.27□□□□□ -1.73
PTPRK-210ENST00000415055 C18orf12Q96KH6 178 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 KLHL15Q96M94 604 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 ZNF599Q96NL3 588 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 FYTTD1Q96QD9 318 aaKnown RBP4.27□□□□□ -1.73
PTPRK-210ENST00000415055 CNPY3Q9BT09 278 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 ZSCAN5AQ9BUG6 496 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 POLDIP3Q9BY77 421 aaKnown RBP4.27□□□□□ -1.73
PTPRK-210ENST00000415055 POLR1EQ9GZS1 481 aaKnown RBP4.27□□□□□ -1.73
PTPRK-210ENST00000415055 SPRTNQ9H040 489 aaPredicted RBP4.27□□□□□ -1.73
PTPRK-210ENST00000415055 WWP1Q9H0M0 922 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 OR10A4Q9H209 315 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 CXXC4Q9H2H0 198 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 SRMSQ9H3Y6 488 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 LIME1Q9H400 295 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 ZNF160Q9HCG1 818 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 PCDHB16Q9NRJ7 776 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 SYBUQ9NX95 663 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 MRPL15Q9P015 296 aaKnown RBP4.27□□□□□ -1.73
PTPRK-210ENST00000415055 KIAA1456Q9P272 454 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 PEMTQ9UBM1 199 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 POMT2Q9UKY4 750 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 MRPS2Q9Y399 296 aaKnown RBP4.27□□□□□ -1.73
PTPRK-210ENST00000415055 PPIL1Q9Y3C6 166 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 AP1M2Q9Y6Q5 423 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 ROS1P08922 2347 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 FREM3P0C091 2139 aa4.27□□□□□ -1.73
PTPRK-210ENST00000415055 ARHGAP21Q5T5U3 1957 aa4.26□□□□□ -1.73
PTPRK-210ENST00000415055 EML6Q6ZMW3 1958 aa4.26□□□□□ -1.73
PTPRK-210ENST00000415055 GTPBP10A4D1E9 387 aaKnown RBP4.26□□□□□ -1.73
PTPRK-210ENST00000415055 RGSL1A5PLK6 1076 aa4.26□□□□□ -1.73
PTPRK-210ENST00000415055 GLOD5A6NK44 160 aa4.26□□□□□ -1.73
PTPRK-210ENST00000415055 OR2AG2A6NM03 316 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms