RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 FAM135BQ49AJ0 1406 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 SHANK3Q9BYB0 1731 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 TMEM2Q9UHN6 1383 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 KIF1AQ12756 1690 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 CENPJQ9HC77 1338 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 IGHV3-16A0A0C4DH30 117 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 IGLON5A6NGN9 336 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 ERI2A8K979 691 aaKnown RBP3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 ZNF724A8MTY0 619 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 SRRM5B3KS81 715 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 CACNB4O00305 520 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 OGTO15294 1046 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 RTN2O75298 545 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 PDGFBP01127 241 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 FHP07954 510 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 FOLR2P14207 255 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 SLC1A6P48664 564 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 TNFSF10P50591 281 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 KIAA1024LP59773 190 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 RPS6KA1Q15418 735 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 OR1C1Q15619 314 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 ECSCRQ19T08 205 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 C9orf66Q5T8R8 295 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 PRAMEF8Q5VWM4 474 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 CDC20BQ86Y33 519 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 CCDC170Q8IYT3 715 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 THEM5Q8N1Q8 247 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 FGFRL1Q8N441 504 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 C10orf53Q8N6V4 93 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 GVQW1Q8N7I0 195 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 NAT8LQ8N9F0 302 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 BANPQ8N9N5 519 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 PCNPQ8WW12 178 aaKnown RBP3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 TOMM40LQ969M1 308 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 C1orf147Q96MC9 270 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 TNFRSF13CQ96RJ3 184 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 RAB40CQ96S21 281 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 ALDH8A1Q9H2A2 487 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 AKIRIN1Q9H9L7 192 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 MAD2L2Q9UI95 211 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 TEKT2Q9UIF3 430 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 RARRES3Q9UL19 164 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 STX8Q9UNK0 236 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 FOXA2Q9Y261 457 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 SH3GLB1Q9Y371 365 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 AUP1Q9Y679 476 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 GLI3P10071 1580 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 KDM3BQ7LBC6 1761 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 OVOS2A0A0J9YW53 1432 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 OVOS2Q6IE36 1432 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 SSH2Q76I76 1423 aa3.02□□□□□ -1.93
HMGB1P11-201ENST00000413899 PLEKHG1Q9ULL1 1385 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 NINLQ9Y2I6 1382 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 MED1Q15648 1581 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 SLC15A5A6NIM6 579 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 SHISA9B4DS77 424 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 B4GAT1O43505 415 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 GALR3O60755 368 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 PRDM1O75626 825 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 AKAP3O75969 853 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 CPNE6O95741 557 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 LYNP07948 512 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 HCKP08631 526 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 SBK2P0C263 348 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 CTNNB1P35222 781 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 SLC1A4P43007 532 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 GSK3BP49841 420 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 RPS27AP62979 156 aaKnown RBP3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 ACY1Q03154 408 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 HSPA14Q0VDF9 509 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 TEFQ10587 303 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 LCP2Q13094 533 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 SGCBQ16585 318 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 STX1AQ16623 288 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 CCL14Q16627 93 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 HIGD2BQ4VC39 106 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 SLC39A12Q504Y0 691 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 C1orf189Q5VU69 101 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 SPINK14Q6IE38 97 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 TMEM270Q6UE05 265 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 TMUB2Q71RG4 321 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 TIPARPQ7Z3E1 657 aaKnown RBP3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 SLC25A42Q86VD7 318 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 IQCA1Q86XH1 822 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 CCDC197Q8NCU1 140 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 HAS2Q92819 552 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 CFAP36Q96G28 342 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 RPP25Q9BUL9 199 aaKnown RBP3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 PUS3Q9BZE2 481 aaKnown RBP3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 OSBPL8Q9BZF1 889 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 SLC5A7Q9GZV3 580 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 ADNPQ9H2P0 1102 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 MARCH7Q9H992 704 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 OR1A2Q9Y585 309 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 NFAT5O94916 1531 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 COL18A1P39060 1754 aa3.01□□□□□ -1.93
HMGB1P11-201ENST00000413899 POLR3AO14802 1390 aaPredicted RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms