RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 SHANK3Q9BYB0 1731 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 hCG_1807616A0A1W2PRN6 198 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 LEUTXA8MZ59 168 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 J3QLW9 94 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 MT-ND5P03915 603 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 SAGP10523 405 aaPredicted RBP13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 ZNF19P17023 458 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 OPCMLQ14982 345 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 AANATQ16613 207 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 PGBD2Q6P3X8 592 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 FAM171BQ6P995 826 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 BRAT1Q6PJG6 821 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 KCTD20Q7Z5Y7 419 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 C10orf53Q8N6V4 93 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 TP53I13Q8NBR0 393 aaPredicted RBP13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 OR4K5Q8NGD3 323 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 TRMT10AQ8TBZ6 339 aaKnown RBP13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 RAD9AQ99638 391 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 CSNK1G1Q9HCP0 422 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 PRDM5Q9NQX1 630 aaPredicted RBP13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 NANSQ9NR45 359 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 TEX10Q9NXF1 929 aaPredicted RBP13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 A0A0U1RQS6 177 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 FLRT2O43155 660 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 PRODHO43272 600 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 CA12O43570 354 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 PVALBP20472 110 aaPredicted RBP13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 HOXA9P31269 272 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 PCDH1Q08174 1060 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 NDUFAF5Q5TEU4 345 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 CALHM3Q86XJ0 350 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 OSTF1Q92882 214 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 WDFY2Q96P53 400 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 METTL17Q9H7H0 456 aaPredicted RBP13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 RDH14Q9HBH5 336 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 SIRT5Q9NXA8 310 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 C2orf78A6NCI8 922 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 ARPC5O15511 151 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 RB1P06400 928 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 GRK5P34947 590 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 KHKP50053 298 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 ST8SIA6P61647 398 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 MLLT1Q03111 559 aaPredicted RBP13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 C9orf64Q5T6V5 341 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 FAM220AQ7Z4H9 259 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 TEX26Q8N6G2 289 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 ANKK1Q8NFD2 765 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 SH3RF2Q8TEC5 729 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 CIDECQ96AQ7 238 aaPredicted RBP13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 TMEM43Q9BTV4 400 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 HECAQ9UBI9 543 aaPredicted RBP13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 RPS6KB2Q9UBS0 482 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 POM121CA8CG34 1229 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 GMDSO60547 372 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 B3GALT4O96024 378 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 TP53P04637 393 aaPredicted RBP13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 CD3GP09693 182 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 SSR2P43308 183 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 CLCN7P51798 805 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 SF1Q15637 639 aaKnown RBP13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 CD276Q5ZPR3 534 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 BAIAP2L2Q6UXY1 529 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 MSRB3Q8IXL7 192 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 GNPDA2Q8TDQ7 276 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 TM9SF4Q92544 642 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 THSD1Q9NS62 852 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 MRPL15Q9P015 296 aaKnown RBP13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 IL17CQ9P0M4 197 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 GABRR3A8MPY1 467 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 MTX2O75431 263 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 TGM6O95932 706 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 PTBP1P26599 531 aaKnown RBP eCLIP13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 TAS2R43P59537 309 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 ZNF33BQ06732 778 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 HYAL2Q12891 473 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 EXOSC2Q13868 293 aaKnown RBP13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 UPP1Q16831 310 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 METTL11BQ5VVY1 283 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 ALKAL1Q6UXT8 129 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 CELF5Q8N6W0 485 aaKnown RBP13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 NANOGP1Q8N7R0 232 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 OR8J2Q8NGG1 315 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 SLC16A10Q8TF71 515 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 ZC3H10Q96K80 434 aaKnown RBP13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 TMEM168Q9H0V1 697 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 NEUROD4Q9HD90 331 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 EVA1BQ9NVM1 165 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 HPF1Q9NWY4 346 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 STOX2Q9P2F5 926 aaPredicted RBP13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 PPT2Q9UMR5 302 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 NHSL1Q5SYE7 1610 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 MMP2P08253 660 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 RPS26P62854 115 aaKnown RBP13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 KCNJ10P78508 379 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 HACD4Q5VWC8 232 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 C17orf64Q86WR6 236 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 GPC2Q8N158 579 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 CHAC2Q8WUX2 184 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms