RNA–Protein interactions for RNA: ENST00000412256.1

RAB11FIP3-202, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-202ENST00000412256 GBAP04062 536 aa12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 GSTA2P09210 222 aa12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 SLC35E2P0CK97 266 aa12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 NR2F6P10588 404 aa12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 GFAPP14136 432 aa12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 SSTR4P31391 388 aa12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 MASP1P48740 699 aa12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 NEK2P51955 445 aa12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 FBXW4P57775 412 aa12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 GPX6P59796 221 aa12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 PCDH1Q08174 1060 aa12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 EBPQ15125 230 aaKnown RBP12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 NTRK2Q16620 822 aa12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 CPSF6Q16630 551 aaKnown RBP eCLIP12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 PFKFB4Q16877 469 aa12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 SPRED3Q2MJR0 410 aa12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 KRTAP21-3Q3LHN1 58 aa12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 TBCELQ5QJ74 424 aa12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 LIPJQ5W064 366 aa12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 BICRALQ6AI39 1079 aa12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 MAATS1Q7Z4T9 603 aa12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 PACS2Q86VP3 889 aa12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 CCDC25Q86WR0 208 aa12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 CDC20BQ86Y33 519 aa12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 RELL2Q8NC24 303 aaPredicted RBP12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 NAXEQ8NCW5 288 aa12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 FAM222BQ8WU58 562 aa12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 UBTD2Q8WUN7 234 aa12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 RNASE6Q93091 150 aaKnown RBP12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 REPS1Q96D71 796 aa12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 GNRHR2Q96P88 292 aa12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 KCNF1Q9H3M0 494 aa12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 MTRF1LQ9UGC7 380 aaKnown RBP12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 CAMK2AQ9UQM7 478 aa12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 ACOT9Q9Y305 439 aa12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 SLC6A5Q9Y345 797 aa12.78□□□□□ -0.36
RAB11FIP3-202ENST00000412256 ANKRD33BA6NCL7 494 aa12.77□□□□□ -0.37
RAB11FIP3-202ENST00000412256 FAM187AA6NFU0 413 aa12.77□□□□□ -0.37
RAB11FIP3-202ENST00000412256 SYCE1LA8MT33 242 aa12.77□□□□□ -0.37
RAB11FIP3-202ENST00000412256 KDM4EB2RXH2 506 aaPredicted RBP12.77□□□□□ -0.37
RAB11FIP3-202ENST00000412256 PGRMC2O15173 223 aa12.77□□□□□ -0.37
RAB11FIP3-202ENST00000412256 SNX4O95219 450 aa12.77□□□□□ -0.37
RAB11FIP3-202ENST00000412256 BSGP35613 385 aa12.77□□□□□ -0.37
RAB11FIP3-202ENST00000412256 ARL1P40616 181 aaPredicted RBP12.77□□□□□ -0.37
RAB11FIP3-202ENST00000412256 ASCL1P50553 236 aa12.77□□□□□ -0.37
RAB11FIP3-202ENST00000412256 AGFG1P52594 562 aaKnown RBP12.77□□□□□ -0.37
RAB11FIP3-202ENST00000412256 SF3B4Q15427 424 aaKnown RBP eCLIP12.77□□□□□ -0.372e-7■■■■■ 103.4
RAB11FIP3-202ENST00000412256 ACSF3Q4G176 576 aaPredicted RBP12.77□□□□□ -0.37
RAB11FIP3-202ENST00000412256 FLYWCH1Q4VC44 716 aa12.77□□□□□ -0.37
RAB11FIP3-202ENST00000412256 FBF1Q8TES7 1133 aa12.77□□□□□ -0.37
RAB11FIP3-202ENST00000412256 KCTD4Q8WVF5 259 aa12.77□□□□□ -0.37
RAB11FIP3-202ENST00000412256 MRRFQ96E11 262 aaKnown RBP12.77□□□□□ -0.37
RAB11FIP3-202ENST00000412256 RILPQ96NA2 401 aa12.77□□□□□ -0.37
RAB11FIP3-202ENST00000412256 TRIB1Q96RU8 372 aa12.77□□□□□ -0.37
RAB11FIP3-202ENST00000412256 DDX31Q9H8H2 851 aaKnown RBP12.77□□□□□ -0.37
RAB11FIP3-202ENST00000412256 SNX15Q9NRS6 342 aa12.77□□□□□ -0.37
RAB11FIP3-202ENST00000412256 RNF14Q9UBS8 474 aa12.77□□□□□ -0.37
RAB11FIP3-202ENST00000412256 ZNF629Q9UEG4 869 aaPredicted RBP12.77□□□□□ -0.37
RAB11FIP3-202ENST00000412256 NPFFR2Q9Y5X5 522 aa12.77□□□□□ -0.37
RAB11FIP3-202ENST00000412256 ANKHD1Q8IWZ3 2542 aaKnown RBP12.77□□□□□ -0.37
RAB11FIP3-202ENST00000412256 A0A0A6YYD5 115 aa12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 A0A1W2PS29 197 aa12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 TUBAL3A6NHL2 446 aa12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 LRRC14BA6NHZ5 514 aa12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 AIFM1O95831 613 aa12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 MTHFD2P13995 350 aa12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 PIK3R1P27986 724 aa12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 CEACAM8P31997 349 aaPredicted RBP12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 GALNSP34059 522 aa12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 TIMP3P35625 211 aa12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 PIK3CGP48736 1102 aa12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 ARFIP1P53367 373 aa12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 PLTPP55058 493 aa12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 NRG3P56975 720 aa12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 IRF9Q00978 393 aa12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 CRYZQ08257 329 aaKnown RBP12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 CUL3Q13618 768 aa12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 SETDB1Q15047 1291 aa12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 RPS6KA2Q15349 733 aa12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 FAM83EQ2M2I3 478 aa12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 MRM1Q6IN84 353 aaKnown RBP12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 LACC1Q8IV20 430 aa12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 PM20D2Q8IYS1 436 aa12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 PRR22Q8IZ63 422 aa12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 LINC01560Q8TB33 94 aa12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 SPPL2AQ8TCT8 520 aa12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 ATP6V1E2Q96A05 226 aa12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 TP53INP1Q96A56 240 aa12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 SH3GL2Q99962 352 aa12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 ZNF717Q9BY31 904 aaPredicted RBP12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 GSX1Q9H4S2 264 aaPredicted RBP12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 IPPKQ9H8X2 491 aa12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 CXorf21Q9HAI6 301 aa12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 RYDENQ9NUL5 291 aaKnown RBP12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 TEX10Q9NXF1 929 aaPredicted RBP12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 CBLCQ9ULV8 474 aa12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 RNF11Q9Y3C5 154 aa12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 TSC22D4Q9Y3Q8 395 aa12.76□□□□□ -0.37
RAB11FIP3-202ENST00000412256 A0A087X1B8 175 aa12.75□□□□□ -0.37
RAB11FIP3-202ENST00000412256 H0YIV9 168 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms