RNA–Protein interactions for RNA: ENST00000411651.6

SUMO3-204, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2 BASIC

Gene SUMO3, Length 1,921 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-204ENST00000411651 ZNF540Q8NDQ6 660 aa19.04■□□□□ 0.64
SUMO3-204ENST00000411651 OR52J3Q8NH60 311 aa19.04■□□□□ 0.64
SUMO3-204ENST00000411651 UTP15Q8TED0 518 aaKnown RBP19.04■□□□□ 0.64
SUMO3-204ENST00000411651 NR4A3Q92570 626 aa19.04■□□□□ 0.64
SUMO3-204ENST00000411651 FCGR1BQ92637 280 aa19.04■□□□□ 0.64
SUMO3-204ENST00000411651 RORBQ92753 470 aa19.04■□□□□ 0.64
SUMO3-204ENST00000411651 NIPSNAP1Q9BPW8 284 aa19.04■□□□□ 0.64
SUMO3-204ENST00000411651 MS4A12Q9NXJ0 267 aa19.04■□□□□ 0.64
SUMO3-204ENST00000411651 ACTR10Q9NZ32 417 aa19.04■□□□□ 0.64
SUMO3-204ENST00000411651 CALML5Q9NZT1 146 aa19.04■□□□□ 0.64
SUMO3-204ENST00000411651 PILRAQ9UKJ1 303 aa19.04■□□□□ 0.64
SUMO3-204ENST00000411651 FBXW2Q9UKT8 454 aa19.04■□□□□ 0.64
SUMO3-204ENST00000411651 LIPT1Q9Y234 373 aa19.04■□□□□ 0.64
SUMO3-204ENST00000411651 RNF6Q9Y252 685 aa19.04■□□□□ 0.64
SUMO3-204ENST00000411651 REV3LO60673 3130 aa19.03■□□□□ 0.64
SUMO3-204ENST00000411651 PRAMEF27A3QJZ7 478 aa19.03■□□□□ 0.64
SUMO3-204ENST00000411651 FAAHO00519 579 aa19.03■□□□□ 0.64
SUMO3-204ENST00000411651 PCDH17O14917 1159 aa19.03■□□□□ 0.64
SUMO3-204ENST00000411651 SCAMP1O15126 338 aa19.03■□□□□ 0.64
SUMO3-204ENST00000411651 FAM20BO75063 409 aa19.03■□□□□ 0.64
SUMO3-204ENST00000411651 IGHV4-34P06331 123 aa19.03■□□□□ 0.64
SUMO3-204ENST00000411651 RAB8AP61006 207 aa19.03■□□□□ 0.64
SUMO3-204ENST00000411651 UBE2IP63279 158 aaKnown RBP19.03■□□□□ 0.64
SUMO3-204ENST00000411651 TNFRSF17Q02223 184 aa19.03■□□□□ 0.64
SUMO3-204ENST00000411651 LAIR1Q6GTX8 287 aa19.03■□□□□ 0.64
SUMO3-204ENST00000411651 TRIM48Q8IWZ4 208 aa19.03■□□□□ 0.64
SUMO3-204ENST00000411651 RBM12BQ8IXT5 1001 aaKnown RBP19.03■□□□□ 0.64
SUMO3-204ENST00000411651 COL21A1Q96P44 957 aa19.03■□□□□ 0.64
SUMO3-204ENST00000411651 RLIMQ9NVW2 624 aa19.03■□□□□ 0.64
SUMO3-204ENST00000411651 ENPP5Q9UJA9 477 aa19.03■□□□□ 0.64
SUMO3-204ENST00000411651 TMCC3Q9ULS5 477 aa19.03■□□□□ 0.64
SUMO3-204ENST00000411651 MGAT4BQ9UQ53 548 aa19.03■□□□□ 0.64
SUMO3-204ENST00000411651 DSPPQ9NZW4 1301 aa19.02■□□□□ 0.64
SUMO3-204ENST00000411651 FFAR1O14842 300 aa19.02■□□□□ 0.64
SUMO3-204ENST00000411651 IFI6P09912 130 aa19.02■□□□□ 0.64
SUMO3-204ENST00000411651 GP2P55259 537 aaKnown RBP19.02■□□□□ 0.64
SUMO3-204ENST00000411651 BTN3A2P78410 334 aa19.02■□□□□ 0.64
SUMO3-204ENST00000411651 NFATC3Q12968 1075 aa19.02■□□□□ 0.64
SUMO3-204ENST00000411651 GPR18Q14330 331 aa19.02■□□□□ 0.64
SUMO3-204ENST00000411651 C18orf63Q68DL7 685 aa19.02■□□□□ 0.64
SUMO3-204ENST00000411651 XAGE5Q8WWM1 108 aa19.02■□□□□ 0.64
SUMO3-204ENST00000411651 C10orf90Q96M02 699 aa19.02■□□□□ 0.64
SUMO3-204ENST00000411651 MACROD1Q9BQ69 325 aa19.02■□□□□ 0.64
SUMO3-204ENST00000411651 CCDC90BQ9GZT6 254 aa19.02■□□□□ 0.64
SUMO3-204ENST00000411651 NMNAT1Q9HAN9 279 aaPredicted RBP19.02■□□□□ 0.64
SUMO3-204ENST00000411651 SLC2A4RGQ9NR83 387 aa19.02■□□□□ 0.64
SUMO3-204ENST00000411651 FKBP14Q9NWM8 211 aa19.02■□□□□ 0.64
SUMO3-204ENST00000411651 SLC9A8Q9Y2E8 581 aa19.02■□□□□ 0.64
SUMO3-204ENST00000411651 C2orf74A8MZ97 194 aa19.02■□□□□ 0.63
SUMO3-204ENST00000411651 VIPP01282 170 aa19.02■□□□□ 0.63
SUMO3-204ENST00000411651 HMGN2P05204 90 aaKnown RBP19.02■□□□□ 0.63
SUMO3-204ENST00000411651 GABRB1P18505 474 aa19.02■□□□□ 0.63
SUMO3-204ENST00000411651 CD6P30203 668 aa19.02■□□□□ 0.63
SUMO3-204ENST00000411651 SYPL1Q16563 259 aa19.02■□□□□ 0.63
SUMO3-204ENST00000411651 SLC44A2Q8IWA5 706 aaPredicted RBP19.02■□□□□ 0.63
SUMO3-204ENST00000411651 OR9Q2Q8NGE9 314 aa19.02■□□□□ 0.63
SUMO3-204ENST00000411651 HMGB4Q8WW32 186 aa19.02■□□□□ 0.63
SUMO3-204ENST00000411651 JPH3Q8WXH2 748 aaPredicted RBP19.02■□□□□ 0.63
SUMO3-204ENST00000411651 ELP4Q96EB1 424 aa19.02■□□□□ 0.63
SUMO3-204ENST00000411651 NAA50Q9GZZ1 169 aaKnown RBP19.02■□□□□ 0.63
SUMO3-204ENST00000411651 ERVK-18Q9QC07 812 aa19.02■□□□□ 0.63
SUMO3-204ENST00000411651 TRPC4Q9UBN4 977 aa19.02■□□□□ 0.63
SUMO3-204ENST00000411651 KLHL20Q9Y2M5 609 aa19.02■□□□□ 0.63
SUMO3-204ENST00000411651 SYT5O00445 386 aa19.01■□□□□ 0.63
SUMO3-204ENST00000411651 ZSCAN9O15535 394 aaPredicted RBP19.01■□□□□ 0.63
SUMO3-204ENST00000411651 PRKRAO75569 313 aaKnown RBP19.01■□□□□ 0.63
SUMO3-204ENST00000411651 SLITRK5O94991 958 aa19.01■□□□□ 0.63
SUMO3-204ENST00000411651 AGR2O95994 175 aa19.01■□□□□ 0.63
SUMO3-204ENST00000411651 H1F0P07305 194 aaKnown RBP19.01■□□□□ 0.63
SUMO3-204ENST00000411651 ZNF888P0CJ79 500 aaPredicted RBP19.01■□□□□ 0.63
SUMO3-204ENST00000411651 MAGP20916 626 aa19.01■□□□□ 0.63
SUMO3-204ENST00000411651 CALRP27797 417 aaKnown RBP19.01■□□□□ 0.63
SUMO3-204ENST00000411651 DCTN2Q13561 401 aaKnown RBP19.01■□□□□ 0.63
SUMO3-204ENST00000411651 GPR19Q15760 415 aa19.01■□□□□ 0.63
SUMO3-204ENST00000411651 CYP27C1Q4G0S4 372 aa19.01■□□□□ 0.63
SUMO3-204ENST00000411651 FCRL6Q6DN72 434 aa19.01■□□□□ 0.63
SUMO3-204ENST00000411651 FIGLAQ6QHK4 219 aa19.01■□□□□ 0.63
SUMO3-204ENST00000411651 ABHD13Q7L211 337 aa19.01■□□□□ 0.63
SUMO3-204ENST00000411651 CCDC116Q8IYX3 515 aa19.01■□□□□ 0.63
SUMO3-204ENST00000411651 SLC22A18ASQ8N1D0 253 aa19.01■□□□□ 0.63
SUMO3-204ENST00000411651 AQP11Q8NBQ7 271 aa19.01■□□□□ 0.63
SUMO3-204ENST00000411651 KCT2Q8NC54 265 aa19.01■□□□□ 0.63
SUMO3-204ENST00000411651 OR13H1Q8NG92 308 aa19.01■□□□□ 0.63
SUMO3-204ENST00000411651 FAM81AQ8TBF8 368 aa19.01■□□□□ 0.63
SUMO3-204ENST00000411651 GAB3Q8WWW8 586 aa19.01■□□□□ 0.63
SUMO3-204ENST00000411651 FUZQ9BT04 418 aa19.01■□□□□ 0.63
SUMO3-204ENST00000411651 FUNDC2Q9BWH2 189 aa19.01■□□□□ 0.63
SUMO3-204ENST00000411651 PINK1Q9BXM7 581 aa19.01■□□□□ 0.63
SUMO3-204ENST00000411651 DGCR6LQ9BY27 220 aa19.01■□□□□ 0.63
SUMO3-204ENST00000411651 CPNE7Q9UBL6 633 aa19.01■□□□□ 0.63
SUMO3-204ENST00000411651 PSORS1C1Q9UIG5 152 aa19.01■□□□□ 0.63
SUMO3-204ENST00000411651 A0A1W2PPW3 197 aa19■□□□□ 0.63
SUMO3-204ENST00000411651 A0A1W2PRQ8 180 aa19■□□□□ 0.63
SUMO3-204ENST00000411651 GLOD5A6NK44 160 aa19■□□□□ 0.63
SUMO3-204ENST00000411651 ZAR1LA6NP61 321 aa19■□□□□ 0.63
SUMO3-204ENST00000411651 CHURC1-FNTBB4DL54 471 aa19■□□□□ 0.63
SUMO3-204ENST00000411651 ELAVL4P26378 380 aaKnown RBP19■□□□□ 0.63
SUMO3-204ENST00000411651 CDC42P60953 191 aa19■□□□□ 0.63
SUMO3-204ENST00000411651 PIGFQ07326 219 aa19■□□□□ 0.63
SUMO3-204ENST00000411651 DGCR6Q14129 220 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms