RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 SLAMF1Q13291 335 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 TDGQ13569 410 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 SUZ12Q15022 739 aaKnown RBP7.08□□□□□ -1.28
CXCR4-202ENST00000409817 PLCL1Q15111 1095 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 LRIT3Q3SXY7 679 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 TOR1AIP1Q5JTV8 583 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 C6orf141Q5SZD1 244 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 BROXQ5VW32 411 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 PRAMEF8Q5VWM4 474 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 PRAMEF7Q5VXH5 474 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 ZNF773Q6PK81 442 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 SLC30A9Q6PML9 568 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 B3GNT6Q6ZMB0 384 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 ZNF793Q6ZN11 406 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 C6orf120Q7Z4R8 191 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 ASPGQ86U10 573 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 TSPYL5Q86VY4 417 aaPredicted RBP7.08□□□□□ -1.28
CXCR4-202ENST00000409817 PLD3Q8IV08 490 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 HS3ST5Q8IZT8 346 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 ZNF655Q8N720 491 aaPredicted RBP7.08□□□□□ -1.28
CXCR4-202ENST00000409817 OR56A1Q8NGH5 318 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 OR5AK3PQ8NH89 298 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 RSC1A1Q92681 617 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 MAGED4Q96JG8 741 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 AMDHD1Q96NU7 426 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 ZNF300Q96RE9 604 aaPredicted RBP7.08□□□□□ -1.28
CXCR4-202ENST00000409817 BBS4Q96RK4 519 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 ZNF607Q96SK3 696 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 SPATA5L1Q9BVQ7 753 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 PCED1AQ9H1Q7 454 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 PAPOLBQ9NRJ5 636 aaKnown RBP7.08□□□□□ -1.28
CXCR4-202ENST00000409817 KRT84Q9NSB2 600 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 MS4A12Q9NXJ0 267 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 VNN3Q9NY84 501 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 NDUFAF4Q9P032 175 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 P2RX2Q9UBL9 471 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 EBF1Q9UH73 591 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 RSL24D1Q9UHA3 163 aaKnown RBP7.08□□□□□ -1.28
CXCR4-202ENST00000409817 PHF11Q9UIL8 331 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 ACSL6Q9UKU0 697 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 FAM32AQ9Y421 112 aaKnown RBP7.08□□□□□ -1.28
CXCR4-202ENST00000409817 PCDHGA8Q9Y5G5 932 aa7.08□□□□□ -1.28
CXCR4-202ENST00000409817 BRWD1Q9NSI6 2320 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 SPTY2D1-AS1A0A0U1RR47 76 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 CCDC160A6NGH7 325 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 C2orf74A8MZ97 194 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 TNFRSF11BO00300 401 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 BTN3A3O00478 584 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 SH3BP5O60239 455 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 SERPINB7O75635 380 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 CPNE6O95741 557 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 EML2O95834 649 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 IFNW1P05000 195 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 IGHV4-34P06331 123 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 TFPTP0C1Z6 253 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 JUNBP17275 347 aaPredicted RBP7.07□□□□□ -1.28
CXCR4-202ENST00000409817 RHCEP18577 417 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 CSNK2A2P19784 350 aaPredicted RBP7.07□□□□□ -1.28
CXCR4-202ENST00000409817 PRKACGP22612 351 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 CRHBPP24387 322 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 CD6P30203 668 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 RRM2P31350 389 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 MPIP34949 423 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 BUD31P41223 144 aaPredicted RBP7.07□□□□□ -1.28
CXCR4-202ENST00000409817 PXNP49023 591 aaPredicted RBP7.07□□□□□ -1.28
CXCR4-202ENST00000409817 KHKP50053 298 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 CDK9P50750 372 aaKnown RBP7.07□□□□□ -1.28
CXCR4-202ENST00000409817 DAPP51397 102 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 HMGA2P52926 109 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 NUP107P57740 925 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 ISL1P61371 349 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 CSNK2BP67870 215 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 PRR5P85299 388 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 HSPB3Q12988 150 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 TUBA3CQ13748 450 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 PRRT3Q5FWE3 981 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 TPRG1LQ5T0D9 272 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 SLC48A1Q6P1K1 146 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 FAM92BQ6ZTR7 304 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 CEP68Q76N32 757 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 GALNT10Q86SR1 603 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 CYP4Z1Q86W10 505 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 KRT73Q86Y46 540 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 NRROSQ86YC3 692 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 DMRTC2Q8IXT2 367 aaPredicted RBP7.07□□□□□ -1.28
CXCR4-202ENST00000409817 MMP21Q8N119 569 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 ATG16L2Q8NAA4 619 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 CAMKVQ8NCB2 501 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 OR10Q1Q8NGQ4 319 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 FLVCR1-AS1Q8TAF5 88 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 ZNF420Q8TAQ5 688 aaPredicted RBP7.07□□□□□ -1.28
CXCR4-202ENST00000409817 MIPOL1Q8TD10 442 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 GIPC3Q8TF64 312 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 SLC38A5Q8WUX1 472 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 TM4SF19Q96DZ7 209 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 SLC35G5Q96KT7 338 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 OR2A14Q96R47 310 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 PITX2Q99697 317 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 PIP5K1AQ99755 562 aa7.07□□□□□ -1.28
CXCR4-202ENST00000409817 GABARAPL3Q9BY60 117 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms