RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 TM9SF2Q99805 663 aa7.11□□□□□ -1.27
LSM5-202ENST00000409292 SFXN3Q9BWM7 321 aa7.11□□□□□ -1.27
LSM5-202ENST00000409292 RBM24Q9BX46 236 aaKnown RBP7.11□□□□□ -1.27
LSM5-202ENST00000409292 EPB41L4BQ9H329 900 aa7.11□□□□□ -1.27
LSM5-202ENST00000409292 PIGMQ9H3S5 423 aa7.11□□□□□ -1.27
LSM5-202ENST00000409292 RPF2Q9H7B2 306 aaKnown RBP7.11□□□□□ -1.27
LSM5-202ENST00000409292 CALHM2Q9HA72 323 aa7.11□□□□□ -1.27
LSM5-202ENST00000409292 SNX15Q9NRS6 342 aa7.11□□□□□ -1.27
LSM5-202ENST00000409292 ZNF226Q9NYT6 803 aa7.11□□□□□ -1.27
LSM5-202ENST00000409292 FRRS1LQ9P0K9 344 aa7.11□□□□□ -1.27
LSM5-202ENST00000409292 DCHS2Q6V1P9 2916 aa7.11□□□□□ -1.27
LSM5-202ENST00000409292 UQCRHLA0A096LP55 91 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 C2orf92A0A1B0GVN3 265 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 SH3D21A4FU49 640 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 NCF1BA6NI72 391 aaPredicted RBP7.1□□□□□ -1.27
LSM5-202ENST00000409292 NCF1CA8MVU1 366 aaPredicted RBP7.1□□□□□ -1.27
LSM5-202ENST00000409292 PGRMC1O00264 195 aaKnown RBP7.1□□□□□ -1.27
LSM5-202ENST00000409292 ACTL6AO96019 429 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 PCNAP12004 261 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 NCF1P14598 390 aaPredicted RBP7.1□□□□□ -1.27
LSM5-202ENST00000409292 ALOX15P16050 662 aaPredicted RBP7.1□□□□□ -1.27
LSM5-202ENST00000409292 HIST1H1TP22492 207 aaPredicted RBP7.1□□□□□ -1.27
LSM5-202ENST00000409292 ATP5A1P25705 553 aaKnown RBP7.1□□□□□ -1.27
LSM5-202ENST00000409292 PCSK6P29122 969 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 CDC25BP30305 580 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 FNTAP49354 379 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 ATP6V0D1P61421 351 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 PCDH1Q08174 1060 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 SETDB1Q15047 1291 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 POU4F3Q15319 338 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 RPS6KA2Q15349 733 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 PPP1R3AQ16821 1122 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 CDKL4Q5MAI5 379 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 TEDDM1Q5T9Z0 273 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 SULT1C3Q6IMI6 304 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 MED27Q6P2C8 311 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 PRSS57Q6UWY2 283 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 GPSM1Q86YR5 675 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 TMEM139Q8IV31 216 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 ST13P4Q8IZP2 240 aaPredicted RBP7.1□□□□□ -1.27
LSM5-202ENST00000409292 Q8N3U1 123 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 BBOF1Q8ND07 529 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 TMEM52Q8NDY8 209 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 OR10G3Q8NGC4 313 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 SPATA3Q8NHX4 192 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 LINC01560Q8TB33 94 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 ZNF721Q8TF20 911 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 RIT1Q92963 219 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 ABTB1Q969K4 478 aaPredicted RBP7.1□□□□□ -1.27
LSM5-202ENST00000409292 TP53INP1Q96A56 240 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 RGMAQ96B86 450 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 LRRC39Q96DD0 335 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 CMTM7Q96FZ5 175 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 CFAP36Q96G28 342 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 F2RL3Q96RI0 385 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 CSF3RQ99062 836 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 TIMP4Q99727 224 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 PIP5K1AQ99755 562 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 PRDM14Q9GZV8 571 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 POPDC3Q9HBV1 291 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 SEMA4BQ9NPR2 832 aaPredicted RBP7.1□□□□□ -1.27
LSM5-202ENST00000409292 CD274Q9NZQ7 290 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 CFL2Q9Y281 166 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 ANGPTL3Q9Y5C1 460 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 MPDZO75970 2070 aa7.1□□□□□ -1.27
LSM5-202ENST00000409292 MYOCOSA0A1B0GUC4 107 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 FAM95CA0A1B0GW59 222 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 MBD3L4A6NDZ8 208 aaPredicted RBP7.09□□□□□ -1.27
LSM5-202ENST00000409292 MBD3L3A6NE82 208 aaPredicted RBP7.09□□□□□ -1.27
LSM5-202ENST00000409292 MBD3L5A6NJ08 208 aaPredicted RBP7.09□□□□□ -1.27
LSM5-202ENST00000409292 C4orf51C9J302 202 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 H0Y3Z8 333 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 CCNT2O60583 730 aaKnown RBP7.09□□□□□ -1.27
LSM5-202ENST00000409292 ETHE1O95571 254 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 LY6G6DO95868 133 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 HRGP04196 525 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 HPNP05981 417 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 RFPL3SP0C7P2 107 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 ENDOUP21128 410 aaKnown RBP7.09□□□□□ -1.27
LSM5-202ENST00000409292 CHMP24386 653 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 GABRB3P28472 473 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 GDF5P43026 501 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 SLC6A12P48065 614 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 CDK9P50750 372 aaKnown RBP7.09□□□□□ -1.27
LSM5-202ENST00000409292 NR0B1P51843 470 aaKnown RBP7.09□□□□□ -1.27
LSM5-202ENST00000409292 ZNF136P52737 540 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 HERVK_113P63132 956 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 ERVK-8P63133 956 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 TIAL1Q01085 375 aaKnown RBP eCLIP7.09□□□□□ -1.27
LSM5-202ENST00000409292 ID2Q02363 134 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 CRYZQ08257 329 aaKnown RBP7.09□□□□□ -1.27
LSM5-202ENST00000409292 MGAT5Q09328 741 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 SLAMF1Q13291 335 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 DOC2AQ14183 400 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 ZNF267Q14586 743 aaPredicted RBP7.09□□□□□ -1.27
LSM5-202ENST00000409292 TGFBIQ15582 683 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 TSNQ15631 228 aaKnown RBP7.09□□□□□ -1.27
LSM5-202ENST00000409292 TBCCQ15814 346 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 NTRK2Q16620 822 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 SWI5Q1ZZU3 235 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms