RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 LASP1Q14847 261 aaKnown RBP23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 GPR32P1Q8NGA4 272 aa23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 OR9A2Q8NGT5 310 aa23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 ACER3Q9NUN7 267 aa23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 PTTG2Q9NZH5 202 aa23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 FBXL21Q9UKT6 434 aa23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 NDRG4Q9ULP0 352 aaKnown RBP23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 PRAMEF27A3QJZ7 478 aa23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 OR5K3A6NET4 321 aa23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 ZSCAN9O15535 394 aaPredicted RBP23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 RECKO95980 971 aa23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 ALOX12P18054 663 aa23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 KCNJ5P48544 419 aa23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 PXNP49023 591 aaPredicted RBP23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 LIM2P55344 173 aa23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 RNF44Q7L0R7 432 aa23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 SAMD14Q8IZD0 417 aaPredicted RBP23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 NUP43Q8NFH3 380 aa23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 BBS10Q8TAM1 723 aa23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 MIPOL1Q8TD10 442 aa23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 RSC1A1Q92681 617 aa23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 ELP4Q96EB1 424 aa23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 OTUB1Q96FW1 271 aaPredicted RBP23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 C10orf90Q96M02 699 aa23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 FOXQ1Q9C009 403 aa23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 MS4A12Q9NXJ0 267 aa23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 KRBA1A5PL33 1030 aa23.23■■□□□ 1.31
DNMT3A-206ENST00000406659 METTL12A8MUP2 240 aa23.23■■□□□ 1.31
DNMT3A-206ENST00000406659 SLC1A7O00341 560 aa23.23■■□□□ 1.31
DNMT3A-206ENST00000406659 ABCB7O75027 752 aa23.23■■□□□ 1.31
DNMT3A-206ENST00000406659 TYRP1P17643 537 aa23.23■■□□□ 1.31
DNMT3A-206ENST00000406659 TTKP33981 857 aa23.23■■□□□ 1.31
DNMT3A-206ENST00000406659 MC3RP41968 323 aa23.23■■□□□ 1.31
DNMT3A-206ENST00000406659 HMGA2P52926 109 aa23.23■■□□□ 1.31
DNMT3A-206ENST00000406659 CRISP3P54108 245 aa23.23■■□□□ 1.31
DNMT3A-206ENST00000406659 RPP38P78345 283 aaKnown RBP23.23■■□□□ 1.31
DNMT3A-206ENST00000406659 PMS2P3Q13401 168 aa23.23■■□□□ 1.31
DNMT3A-206ENST00000406659 GANABQ14697 944 aaKnown RBP23.23■■□□□ 1.31
DNMT3A-206ENST00000406659 NEDD8Q15843 81 aa23.23■■□□□ 1.31
DNMT3A-206ENST00000406659 LAIR2Q6ISS4 152 aa23.23■■□□□ 1.31
DNMT3A-206ENST00000406659 ZNF605Q86T29 641 aa23.23■■□□□ 1.31
DNMT3A-206ENST00000406659 TSPYL5Q86VY4 417 aaPredicted RBP23.23■■□□□ 1.31
DNMT3A-206ENST00000406659 BPIFB6Q8NFQ5 453 aa23.23■■□□□ 1.31
DNMT3A-206ENST00000406659 OR4K14Q8NGD5 310 aa23.23■■□□□ 1.31
DNMT3A-206ENST00000406659 CNIH3Q8TBE1 160 aa23.23■■□□□ 1.31
DNMT3A-206ENST00000406659 PHF10Q8WUB8 498 aaKnown RBP23.23■■□□□ 1.31
DNMT3A-206ENST00000406659 APOBEC4Q8WW27 367 aaKnown RBP23.23■■□□□ 1.31
DNMT3A-206ENST00000406659 KLHL6Q8WZ60 621 aa23.23■■□□□ 1.31
DNMT3A-206ENST00000406659 SHDQ96IW2 340 aa23.23■■□□□ 1.31
DNMT3A-206ENST00000406659 ZNF354BQ96LW1 612 aa23.23■■□□□ 1.31
DNMT3A-206ENST00000406659 GABARAPL3Q9BY60 117 aa23.23■■□□□ 1.31
DNMT3A-206ENST00000406659 GPC6Q9Y625 555 aaPredicted RBP23.23■■□□□ 1.31
DNMT3A-206ENST00000406659 TNRC18O15417 2968 aaPredicted RBP23.22■■□□□ 1.31
DNMT3A-206ENST00000406659 CD38P28907 300 aa23.22■■□□□ 1.31
DNMT3A-206ENST00000406659 XKP51811 444 aa23.22■■□□□ 1.31
DNMT3A-206ENST00000406659 LEXMQ3ZCV2 418 aa23.22■■□□□ 1.31
DNMT3A-206ENST00000406659 MANEAQ5SRI9 462 aa23.22■■□□□ 1.31
DNMT3A-206ENST00000406659 LRRC25Q8N386 305 aaPredicted RBP23.22■■□□□ 1.31
DNMT3A-206ENST00000406659 KAT2AQ92830 837 aa23.22■■□□□ 1.31
DNMT3A-206ENST00000406659 C16orf58Q96GQ5 468 aa23.22■■□□□ 1.31
DNMT3A-206ENST00000406659 SPATA5L1Q9BVQ7 753 aa23.22■■□□□ 1.31
DNMT3A-206ENST00000406659 ZNF556Q9HAH1 456 aa23.22■■□□□ 1.31
DNMT3A-206ENST00000406659 DAPP1Q9UN19 280 aa23.22■■□□□ 1.31
DNMT3A-206ENST00000406659 POFUT2Q9Y2G5 429 aa23.22■■□□□ 1.31
DNMT3A-206ENST00000406659 TDRD6O60522 2096 aaKnown RBP23.22■■□□□ 1.31
DNMT3A-206ENST00000406659 PCDH17O14917 1159 aa23.22■■□□□ 1.31
DNMT3A-206ENST00000406659 CCNB2O95067 398 aa23.22■■□□□ 1.31
DNMT3A-206ENST00000406659 ANGPTL1O95841 491 aa23.22■■□□□ 1.31
DNMT3A-206ENST00000406659 WNT1P04628 370 aa23.22■■□□□ 1.31
DNMT3A-206ENST00000406659 CCDC159P0C7I6 412 aa23.22■■□□□ 1.31
DNMT3A-206ENST00000406659 EPHA2P29317 976 aa23.22■■□□□ 1.31
DNMT3A-206ENST00000406659 SH3BGRP55822 239 aaPredicted RBP23.22■■□□□ 1.31
DNMT3A-206ENST00000406659 ELOCQ15369 112 aa23.22■■□□□ 1.31
DNMT3A-206ENST00000406659 CLVS1Q8IUQ0 354 aaPredicted RBP23.22■■□□□ 1.31
DNMT3A-206ENST00000406659 TAGAPQ8N103 731 aa23.22■■□□□ 1.31
DNMT3A-206ENST00000406659 GALNT15Q8N3T1 639 aa23.22■■□□□ 1.31
DNMT3A-206ENST00000406659 PITX2Q99697 317 aa23.22■■□□□ 1.31
DNMT3A-206ENST00000406659 LYRM4Q9HD34 91 aa23.22■■□□□ 1.31
DNMT3A-206ENST00000406659 BCL2L10Q9HD36 194 aa23.22■■□□□ 1.31
DNMT3A-206ENST00000406659 A8MVJ9 347 aa23.21■■□□□ 1.31
DNMT3A-206ENST00000406659 LIMS1P48059 325 aa23.21■■□□□ 1.31
DNMT3A-206ENST00000406659 PPP1CAP62136 330 aa23.21■■□□□ 1.31
DNMT3A-206ENST00000406659 RAB39AQ14964 217 aa23.21■■□□□ 1.31
DNMT3A-206ENST00000406659 LTB4RQ15722 352 aa23.21■■□□□ 1.31
DNMT3A-206ENST00000406659 GPAT3Q53EU6 434 aa23.21■■□□□ 1.31
DNMT3A-206ENST00000406659 ZNF438Q7Z4V0 828 aa23.21■■□□□ 1.31
DNMT3A-206ENST00000406659 CSNK1A1LQ8N752 337 aa23.21■■□□□ 1.31
DNMT3A-206ENST00000406659 ZNF566Q969W8 418 aa23.21■■□□□ 1.31
DNMT3A-206ENST00000406659 CCDC3Q9BQI4 270 aa23.21■■□□□ 1.31
DNMT3A-206ENST00000406659 CXorf21Q9HAI6 301 aa23.21■■□□□ 1.31
DNMT3A-206ENST00000406659 EQTNQ9NQ60 294 aa23.21■■□□□ 1.31
DNMT3A-206ENST00000406659 PRDM9Q9NQV7 894 aa23.21■■□□□ 1.31
DNMT3A-206ENST00000406659 RLIMQ9NVW2 624 aa23.21■■□□□ 1.31
DNMT3A-206ENST00000406659 RHCGQ9UBD6 479 aa23.21■■□□□ 1.31
DNMT3A-206ENST00000406659 MRPS2Q9Y399 296 aaKnown RBP23.21■■□□□ 1.31
DNMT3A-206ENST00000406659 HCN4Q9Y3Q4 1203 aa23.21■■□□□ 1.31
DNMT3A-206ENST00000406659 SLC22A7Q9Y694 548 aa23.21■■□□□ 1.31
DNMT3A-206ENST00000406659 DNAJB6O75190 326 aa23.2■■□□□ 1.3
DNMT3A-206ENST00000406659 CSF2P04141 144 aa23.2■■□□□ 1.3
DNMT3A-206ENST00000406659 JUNBP17275 347 aaPredicted RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms