RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 PTCHD1Q96NR3 888 aa16.65■□□□□ 0.26
HDAC11-204ENST00000404040 KCNC2Q96PR1 638 aa16.65■□□□□ 0.26
HDAC11-204ENST00000404040 MTERF1Q99551 399 aaKnown RBP16.65■□□□□ 0.26
HDAC11-204ENST00000404040 TMUB1Q9BVT8 246 aa16.65■□□□□ 0.26
HDAC11-204ENST00000404040 MS4A8Q9BY19 250 aa16.65■□□□□ 0.26
HDAC11-204ENST00000404040 KCNJ16Q9NPI9 418 aa16.65■□□□□ 0.26
HDAC11-204ENST00000404040 DMRT3Q9NQL9 472 aa16.65■□□□□ 0.26
HDAC11-204ENST00000404040 PFDN4Q9NQP4 134 aa16.65■□□□□ 0.26
HDAC11-204ENST00000404040 AHSPQ9NZD4 102 aa16.65■□□□□ 0.26
HDAC11-204ENST00000404040 ZNF225Q9UK10 706 aa16.65■□□□□ 0.26
HDAC11-204ENST00000404040 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.65■□□□□ 0.26
HDAC11-204ENST00000404040 TCRBV16S1A1N1A0A5B0 115 aa16.64■□□□□ 0.25
HDAC11-204ENST00000404040 UBFD1O14562 309 aaKnown RBP16.64■□□□□ 0.25
HDAC11-204ENST00000404040 AZIN1O14977 448 aa16.64■□□□□ 0.25
HDAC11-204ENST00000404040 HSPA4LO95757 839 aa16.64■□□□□ 0.25
HDAC11-204ENST00000404040 B3GALT4O96024 378 aa16.64■□□□□ 0.25
HDAC11-204ENST00000404040 FGF4P08620 206 aa16.64■□□□□ 0.25
HDAC11-204ENST00000404040 HOXD4P09016 255 aaPredicted RBP16.64■□□□□ 0.25
HDAC11-204ENST00000404040 CD99P14209 185 aa16.64■□□□□ 0.25
HDAC11-204ENST00000404040 MAOAP21397 527 aa16.64■□□□□ 0.25
HDAC11-204ENST00000404040 RAP1GDS1P52306 607 aa16.64■□□□□ 0.25
HDAC11-204ENST00000404040 ABCE1P61221 599 aaKnown RBP16.64■□□□□ 0.25
HDAC11-204ENST00000404040 BTG2P78543 158 aa16.64■□□□□ 0.25
HDAC11-204ENST00000404040 HYAL2Q12891 473 aa16.64■□□□□ 0.25
HDAC11-204ENST00000404040 CSTF3Q12996 717 aaKnown RBP16.64■□□□□ 0.25
HDAC11-204ENST00000404040 DEPDC1Q5TB30 811 aa16.64■□□□□ 0.25
HDAC11-204ENST00000404040 KHDRBS2Q5VWX1 349 aaKnown RBP16.64■□□□□ 0.25
HDAC11-204ENST00000404040 VN1R5Q7Z5H4 357 aa16.64■□□□□ 0.25
HDAC11-204ENST00000404040 CCDC71Q8IV32 467 aaPredicted RBP16.64■□□□□ 0.25
HDAC11-204ENST00000404040 CLYBLQ8N0X4 340 aa16.64■□□□□ 0.25
HDAC11-204ENST00000404040 CYP4Z2PQ8N1L4 340 aa16.64■□□□□ 0.25
HDAC11-204ENST00000404040 NRGNQ92686 78 aa16.64■□□□□ 0.25
HDAC11-204ENST00000404040 TBCDQ9BTW9 1192 aa16.64■□□□□ 0.25
HDAC11-204ENST00000404040 DEFB126Q9BYW3 111 aa16.64■□□□□ 0.25
HDAC11-204ENST00000404040 COPS7BQ9H9Q2 264 aaPredicted RBP16.64■□□□□ 0.25
HDAC11-204ENST00000404040 INTS9Q9NV88 658 aaKnown RBP16.64■□□□□ 0.25
HDAC11-204ENST00000404040 NSD1Q96L73 2696 aaPredicted RBP16.63■□□□□ 0.25
HDAC11-204ENST00000404040 FREM3P0C091 2139 aa16.63■□□□□ 0.25
HDAC11-204ENST00000404040 A0A1B0GTL3 188 aa16.63■□□□□ 0.25
HDAC11-204ENST00000404040 SERTM1A2A2V5 107 aa16.63■□□□□ 0.25
HDAC11-204ENST00000404040 MANBAO00462 879 aa16.63■□□□□ 0.25
HDAC11-204ENST00000404040 ERI3O43414 337 aaKnown RBP16.63■□□□□ 0.25
HDAC11-204ENST00000404040 SEMA3DO95025 777 aa16.63■□□□□ 0.25
HDAC11-204ENST00000404040 TGFB1P01137 390 aa16.63■□□□□ 0.25
HDAC11-204ENST00000404040 ZNF888P0CJ79 500 aaPredicted RBP16.63■□□□□ 0.25
HDAC11-204ENST00000404040 SMIM10L1P0DMW3 83 aa16.63■□□□□ 0.25
HDAC11-204ENST00000404040 HOXB4P17483 251 aaPredicted RBP16.63■□□□□ 0.25
HDAC11-204ENST00000404040 BGNP21810 368 aa16.63■□□□□ 0.25
HDAC11-204ENST00000404040 SLC1A6P48664 564 aa16.63■□□□□ 0.25
HDAC11-204ENST00000404040 GPR85P60893 370 aa16.63■□□□□ 0.25
HDAC11-204ENST00000404040 RPS13P62277 151 aaKnown RBP16.63■□□□□ 0.25
HDAC11-204ENST00000404040 EMC4Q5J8M3 183 aa16.63■□□□□ 0.25
HDAC11-204ENST00000404040 RNF165Q6ZSG1 346 aa16.63■□□□□ 0.25
HDAC11-204ENST00000404040 APCDD1LQ8NCL9 501 aa16.63■□□□□ 0.25
HDAC11-204ENST00000404040 OR52N2Q8NGI0 321 aa16.63■□□□□ 0.25
HDAC11-204ENST00000404040 RGMAQ96B86 450 aa16.63■□□□□ 0.25
HDAC11-204ENST00000404040 SMIM10Q96HG1 83 aa16.63■□□□□ 0.25
HDAC11-204ENST00000404040 CCT7Q99832 543 aa16.63■□□□□ 0.25
HDAC11-204ENST00000404040 NPLQ9BXD5 320 aaPredicted RBP16.63■□□□□ 0.25
HDAC11-204ENST00000404040 CXXC4Q9H2H0 198 aa16.63■□□□□ 0.25
HDAC11-204ENST00000404040 MANSC1Q9H8J5 431 aa16.63■□□□□ 0.25
HDAC11-204ENST00000404040 PRDM9Q9NQV7 894 aa16.63■□□□□ 0.25
HDAC11-204ENST00000404040 THAP1Q9NVV9 213 aa16.63■□□□□ 0.25
HDAC11-204ENST00000404040 NCKAP5O14513 1909 aa16.62■□□□□ 0.25
HDAC11-204ENST00000404040 MPDZO75970 2070 aa16.62■□□□□ 0.25
HDAC11-204ENST00000404040 TRBV11-1A0A0K0K1C0 115 aa16.62■□□□□ 0.25
HDAC11-204ENST00000404040 FAM221AA4D161 298 aa16.62■□□□□ 0.25
HDAC11-204ENST00000404040 KLF11O14901 512 aa16.62■□□□□ 0.25
HDAC11-204ENST00000404040 PDYNP01213 254 aa16.62■□□□□ 0.25
HDAC11-204ENST00000404040 CHN1P15882 459 aa16.62■□□□□ 0.25
HDAC11-204ENST00000404040 HNRNPH1P31943 449 aaKnown RBP16.62■□□□□ 0.25
HDAC11-204ENST00000404040 NEK2P51955 445 aa16.62■□□□□ 0.25
HDAC11-204ENST00000404040 IST1P53990 364 aa16.62■□□□□ 0.25
HDAC11-204ENST00000404040 MTTPP55157 894 aa16.62■□□□□ 0.25
HDAC11-204ENST00000404040 NUP107P57740 925 aa16.62■□□□□ 0.25
HDAC11-204ENST00000404040 MYBPHQ13203 477 aa16.62■□□□□ 0.25
HDAC11-204ENST00000404040 AP5B1Q2VPB7 878 aa16.62■□□□□ 0.25
HDAC11-204ENST00000404040 CES4AQ5XG92 561 aa16.62■□□□□ 0.25
HDAC11-204ENST00000404040 ABHD17CQ6PCB6 329 aa16.62■□□□□ 0.25
HDAC11-204ENST00000404040 MDGA2Q7Z553 956 aa16.62■□□□□ 0.25
HDAC11-204ENST00000404040 TMEM156Q8N614 296 aa16.62■□□□□ 0.25
HDAC11-204ENST00000404040 QRFPRQ96P65 431 aa16.62■□□□□ 0.25
HDAC11-204ENST00000404040 F2RL3Q96RI0 385 aa16.62■□□□□ 0.25
HDAC11-204ENST00000404040 SERINC2Q96SA4 455 aa16.62■□□□□ 0.25
HDAC11-204ENST00000404040 FOXC2Q99958 501 aa16.62■□□□□ 0.25
HDAC11-204ENST00000404040 SLC24A3Q9HC58 644 aa16.62■□□□□ 0.25
HDAC11-204ENST00000404040 RAP2CQ9Y3L5 183 aa16.62■□□□□ 0.25
HDAC11-204ENST00000404040 TRAF6Q9Y4K3 522 aa16.62■□□□□ 0.25
HDAC11-204ENST00000404040 B3GALT2O43825 422 aa16.61■□□□□ 0.25
HDAC11-204ENST00000404040 ITGA10O75578 1167 aa16.61■□□□□ 0.25
HDAC11-204ENST00000404040 PDE9AO76083 593 aa16.61■□□□□ 0.25
HDAC11-204ENST00000404040 CHRNGP07510 517 aa16.61■□□□□ 0.25
HDAC11-204ENST00000404040 RNH1P13489 461 aaKnown RBP16.61■□□□□ 0.25
HDAC11-204ENST00000404040 NR0B1P51843 470 aaKnown RBP16.61■□□□□ 0.25
HDAC11-204ENST00000404040 PLA2G16P53816 162 aa16.61■□□□□ 0.25
HDAC11-204ENST00000404040 RAB8AP61006 207 aa16.61■□□□□ 0.25
HDAC11-204ENST00000404040 PMPCAQ10713 525 aa16.61■□□□□ 0.25
HDAC11-204ENST00000404040 TERF2Q15554 542 aa16.61■□□□□ 0.25
HDAC11-204ENST00000404040 SGO1Q5FBB7 561 aa16.61■□□□□ 0.25
HDAC11-204ENST00000404040 SH2D4BQ5SQS7 431 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms