RNA–Protein interactions for RNA: ENST00000402738.5

HERC3-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-202ENST00000402738 SNED1Q8TER0 1413 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 PRAF2O60831 178 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 JRKO75564 520 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 SULT1C4O75897 302 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 TSPAN15O95858 294 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 HRGP04196 525 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 SLC35G6P0C7Q6 338 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 ALPPL2P10696 532 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 OSMP13725 252 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 CTSEP14091 401 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 UQCRC2P22695 453 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 CMPK1P30085 196 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 ART1P52961 327 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 POU6F2P78424 691 aaPredicted RBP9.37□□□□□ -0.91
HERC3-202ENST00000402738 RCAN2Q14206 197 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 Q6ZPB1 254 aaPredicted RBP9.37□□□□□ -0.91
HERC3-202ENST00000402738 SLC7A6Q92536 515 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 RBM18Q96H35 190 aaKnown RBP9.37□□□□□ -0.91
HERC3-202ENST00000402738 OR2M2Q96R28 347 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 SYNPO2LQ9H987 977 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 ZNF304Q9HCX3 659 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 PREX1Q8TCU6 1659 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 TTLL8A6PVC2 850 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 POP4O95707 220 aaKnown RBP9.37□□□□□ -0.91
HERC3-202ENST00000402738 UCHL1P09936 223 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 CBSLP0DN79 551 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 ARSBP15848 533 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 GABRR2P28476 465 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 CBSP35520 551 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 FCN2Q15485 313 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 ZNF789Q5FWF6 425 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 TMCO2Q7Z6W1 182 aaPredicted RBP9.37□□□□□ -0.91
HERC3-202ENST00000402738 LACC1Q8IV20 430 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 ZNF454Q8N9F8 522 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 PBDC1Q9BVG4 233 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 XYLT2Q9H1B5 865 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 TMEM45AQ9NWC5 275 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 DUS2Q9NX74 493 aaKnown RBP9.37□□□□□ -0.91
HERC3-202ENST00000402738 GPRC5BQ9NZH0 403 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 SLAMF8Q9P0V8 285 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 WDR45Q9Y484 360 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 ZNF705GA8MUZ8 300 aaPredicted RBP9.37□□□□□ -0.91
HERC3-202ENST00000402738 ERI3O43414 337 aaKnown RBP9.37□□□□□ -0.91
HERC3-202ENST00000402738 SSX4O60224 188 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 GSRP00390 522 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 AMY2AP04746 511 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 SNRNP70P08621 437 aaKnown RBP9.37□□□□□ -0.91
HERC3-202ENST00000402738 FOSL1P15407 271 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 CCR8P51685 355 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 MEF2AQ02078 507 aaPredicted RBP9.37□□□□□ -0.91
HERC3-202ENST00000402738 RASGEF1BQ0VAM2 473 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 SLC16A9Q7RTY1 509 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 KCTD20Q7Z5Y7 419 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 RETREG3Q86VR2 466 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 ARL14Q8N4G2 192 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 OR51A7Q8NH64 312 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 OR8D1Q8WZ84 308 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 AHCYL2Q96HN2 611 aaKnown RBP9.37□□□□□ -0.91
HERC3-202ENST00000402738 C17orf62Q9BQA9 187 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 B3GNT2Q9NY97 397 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 LAMP5Q9UJQ1 280 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 CA5BQ9Y2D0 317 aa9.37□□□□□ -0.91
HERC3-202ENST00000402738 SULT1C2O00338 296 aa9.36□□□□□ -0.91
HERC3-202ENST00000402738 PPP6CO00743 305 aa9.36□□□□□ -0.91
HERC3-202ENST00000402738 HLA-EP13747 358 aa9.36□□□□□ -0.91
HERC3-202ENST00000402738 GAS6Q14393 721 aa9.36□□□□□ -0.91
HERC3-202ENST00000402738 LRIT3Q3SXY7 679 aa9.36□□□□□ -0.91
HERC3-202ENST00000402738 C14orf28Q4W4Y0 310 aa9.36□□□□□ -0.91
HERC3-202ENST00000402738 SPIN3Q5JUX0 258 aa9.36□□□□□ -0.91
HERC3-202ENST00000402738 TREML2Q5T2D2 321 aa9.36□□□□□ -0.91
HERC3-202ENST00000402738 RGMBQ6NW40 437 aa9.36□□□□□ -0.91
HERC3-202ENST00000402738 TMEM205Q6UW68 189 aa9.36□□□□□ -0.91
HERC3-202ENST00000402738 GSG1LQ6UXU4 331 aa9.36□□□□□ -0.91
HERC3-202ENST00000402738 TAS1R3Q7RTX0 852 aa9.36□□□□□ -0.91
HERC3-202ENST00000402738 ENTHD1Q8IYW4 607 aa9.36□□□□□ -0.91
HERC3-202ENST00000402738 DBF4BQ8NFT6 615 aa9.36□□□□□ -0.91
HERC3-202ENST00000402738 ASAH2Q9NR71 780 aa9.36□□□□□ -0.91
HERC3-202ENST00000402738 TUBG2Q9NRH3 451 aa9.36□□□□□ -0.91
HERC3-202ENST00000402738 THSD1Q9NS62 852 aa9.36□□□□□ -0.91
HERC3-202ENST00000402738 PARPBPQ9NWS1 579 aa9.36□□□□□ -0.91
HERC3-202ENST00000402738 ERVW-1Q9UQF0 538 aa9.36□□□□□ -0.91
HERC3-202ENST00000402738 AFDNP55196 1824 aaKnown RBP9.36□□□□□ -0.91
HERC3-202ENST00000402738 SPEF2Q9C093 1822 aa9.36□□□□□ -0.91
HERC3-202ENST00000402738 ARL5CA6NH57 179 aa9.36□□□□□ -0.91
HERC3-202ENST00000402738 GLOD5A6NK44 160 aa9.36□□□□□ -0.91
HERC3-202ENST00000402738 PRSS44E7EML9 344 aa9.36□□□□□ -0.91
HERC3-202ENST00000402738 BLOC1S5-TXNDC5H3BN57 136 aa9.36□□□□□ -0.91
HERC3-202ENST00000402738 POLR1CO15160 346 aaPredicted RBP9.36□□□□□ -0.91
HERC3-202ENST00000402738 AOC2O75106 756 aa9.36□□□□□ -0.91
HERC3-202ENST00000402738 SOX30O94993 753 aa9.36□□□□□ -0.91
HERC3-202ENST00000402738 MLLT3P42568 568 aaPredicted RBP9.36□□□□□ -0.91
HERC3-202ENST00000402738 CLCN7P51798 805 aa9.36□□□□□ -0.91
HERC3-202ENST00000402738 PCGF3Q3KNV8 242 aa9.36□□□□□ -0.91
HERC3-202ENST00000402738 TIGD5Q53EQ6 642 aa9.36□□□□□ -0.91
HERC3-202ENST00000402738 RAB11FIP2Q7L804 512 aa9.36□□□□□ -0.91
HERC3-202ENST00000402738 PNLDC1Q8NA58 520 aaKnown RBP9.36□□□□□ -0.91
HERC3-202ENST00000402738 PXYLP1Q8TE99 480 aa9.36□□□□□ -0.91
HERC3-202ENST00000402738 ZNF419Q96HQ0 510 aaPredicted RBP9.36□□□□□ -0.91
HERC3-202ENST00000402738 PSKH2Q96QS6 385 aa9.36□□□□□ -0.91
HERC3-202ENST00000402738 FIZ1Q96SL8 496 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms