RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 ZNF84P51523 738 aa6.3□□□□□ -1.4
SMCO1-201ENST00000397537 WDR5P61964 334 aaKnown RBP6.3□□□□□ -1.4
SMCO1-201ENST00000397537 SNRPEP62304 92 aaKnown RBP6.3□□□□□ -1.4
SMCO1-201ENST00000397537 FKBP1BP68106 108 aa6.3□□□□□ -1.4
SMCO1-201ENST00000397537 E2F1Q01094 437 aa6.3□□□□□ -1.4
SMCO1-201ENST00000397537 FOXM1Q08050 763 aa6.3□□□□□ -1.4
SMCO1-201ENST00000397537 STX1AQ16623 288 aa6.3□□□□□ -1.4
SMCO1-201ENST00000397537 ESCO2Q56NI9 601 aa6.3□□□□□ -1.4
SMCO1-201ENST00000397537 PDZK1Q5T2W1 519 aa6.3□□□□□ -1.4
SMCO1-201ENST00000397537 VWA5B1Q5TIE3 1220 aa6.3□□□□□ -1.4
SMCO1-201ENST00000397537 GPR157Q5UAW9 335 aa6.3□□□□□ -1.4
SMCO1-201ENST00000397537 STX12Q86Y82 276 aa6.3□□□□□ -1.4
SMCO1-201ENST00000397537 MICU2Q8IYU8 434 aa6.3□□□□□ -1.4
SMCO1-201ENST00000397537 TMEM123Q8N131 208 aa6.3□□□□□ -1.4
SMCO1-201ENST00000397537 ARHGAP18Q8N392 663 aa6.3□□□□□ -1.4
SMCO1-201ENST00000397537 PHYHIPQ92561 330 aa6.3□□□□□ -1.4
SMCO1-201ENST00000397537 TANKQ92844 425 aa6.3□□□□□ -1.4
SMCO1-201ENST00000397537 HRASLS5Q96KN8 279 aa6.3□□□□□ -1.4
SMCO1-201ENST00000397537 ZSWIM1Q9BR11 485 aa6.3□□□□□ -1.4
SMCO1-201ENST00000397537 PELOQ9BRX2 385 aaKnown RBP6.3□□□□□ -1.4
SMCO1-201ENST00000397537 WRAP53Q9BUR4 548 aaKnown RBP6.3□□□□□ -1.4
SMCO1-201ENST00000397537 ACTRT3Q9BYD9 372 aa6.3□□□□□ -1.4
SMCO1-201ENST00000397537 NDEL1Q9GZM8 345 aa6.3□□□□□ -1.4
SMCO1-201ENST00000397537 Q9N2K0 584 aa6.3□□□□□ -1.4
SMCO1-201ENST00000397537 PHPT1Q9NRX4 125 aaPredicted RBP6.3□□□□□ -1.4
SMCO1-201ENST00000397537 RNF186Q9NXI6 227 aa6.3□□□□□ -1.4
SMCO1-201ENST00000397537 GAR1Q9NY12 217 aaKnown RBP6.3□□□□□ -1.4
SMCO1-201ENST00000397537 P2RX2Q9UBL9 471 aa6.3□□□□□ -1.4
SMCO1-201ENST00000397537 DCDC2Q9UHG0 476 aa6.3□□□□□ -1.4
SMCO1-201ENST00000397537 ZNF639Q9UID6 485 aa6.3□□□□□ -1.4
SMCO1-201ENST00000397537 RASD1Q9Y272 281 aa6.3□□□□□ -1.4
SMCO1-201ENST00000397537 RANBP2P49792 3224 aaKnown RBP6.3□□□□□ -1.4
SMCO1-201ENST00000397537 ITGB4P16144 1822 aa6.3□□□□□ -1.4
SMCO1-201ENST00000397537 PLSCR5A0PG75 271 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 A6NNC1 897 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 C9JVG2 144 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 SP9P0CG40 484 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 DBTP11182 482 aaKnown RBP6.29□□□□□ -1.4
SMCO1-201ENST00000397537 CETPP11597 493 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 EPCAMP16422 314 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 UBA1P22314 1058 aaKnown RBP6.29□□□□□ -1.4
SMCO1-201ENST00000397537 CD96P40200 585 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 CDH6P55285 790 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 HERV-K104P63124 156 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 TROAPQ12815 778 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 PIGHQ14442 188 aaPredicted RBP6.29□□□□□ -1.4
SMCO1-201ENST00000397537 NONOQ15233 471 aaKnown RBP eCLIP6.29□□□□□ -1.4
SMCO1-201ENST00000397537 KYAT1Q16773 422 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 PLK5Q496M5 336 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 SYTL3Q4VX76 610 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 SAPCD1Q5SSQ6 148 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 PRAMEF19Q5SWL8 479 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 THEM4Q5T1C6 240 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 LIPNQ5VXI9 398 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 PLEKHA7Q6IQ23 1121 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 TRMT10BQ6PF06 316 aaKnown RBP6.29□□□□□ -1.4
SMCO1-201ENST00000397537 C3orf62Q6ZUJ4 267 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 LINGO2Q7L985 606 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 SLC51BQ86UW2 128 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 FAM83FQ8NEG4 500 aaPredicted RBP6.29□□□□□ -1.4
SMCO1-201ENST00000397537 OR7G1Q8NGA0 311 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 OR4C5Q8NGB2 326 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 RHEBL1Q8TAI7 183 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 SCARB1Q8WTV0 552 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 NRGNQ92686 78 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 IGSF21Q96ID5 467 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 TM6SF1Q9BZW5 370 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 C7orf69Q9H7B7 122 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 LYRM4Q9HD34 91 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 PTTG3PQ9NZH4 202 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 RUVBL2Q9Y230 463 aaKnown RBP6.29□□□□□ -1.4
SMCO1-201ENST00000397537 ZDHHC9Q9Y397 364 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.29□□□□□ -1.4
SMCO1-201ENST00000397537 ZMYM6O95789 1325 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 RNF222A6NCQ9 220 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 TMEM202A6NGA9 273 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 NBR2O15453 112 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 BUD23O43709 281 aaKnown RBP6.29□□□□□ -1.4
SMCO1-201ENST00000397537 MGRN1O60291 552 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 CST1P01037 141 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 IGHV2-70P01814 119 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 CD63P08962 238 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 CCNB1P14635 433 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 GSTM3P21266 225 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 MAT2AP31153 395 aaKnown RBP6.29□□□□□ -1.4
SMCO1-201ENST00000397537 NDST2P52849 883 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 GPX6P59796 221 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 SUMO2P61956 95 aaKnown RBP6.29□□□□□ -1.4
SMCO1-201ENST00000397537 MRPS25P82663 173 aaKnown RBP6.29□□□□□ -1.4
SMCO1-201ENST00000397537 IKZF1Q13422 519 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 KEAP1Q14145 624 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 YTHDF3Q7Z739 585 aaKnown RBP6.29□□□□□ -1.4
SMCO1-201ENST00000397537 DTX2Q86UW9 622 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 CHSY1Q86X52 802 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 TDHQ8IZJ6 230 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 ST13P4Q8IZP2 240 aaPredicted RBP6.29□□□□□ -1.4
SMCO1-201ENST00000397537 ZNF781Q8N8C0 355 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 BHLHE22Q8NFJ8 381 aaPredicted RBP6.29□□□□□ -1.4
SMCO1-201ENST00000397537 OR8J2Q8NGG1 315 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 UBA3Q8TBC4 463 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms