RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 CLDN18P56856 261 aa12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 FBXW4P57775 412 aa12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 STXBP1P61764 594 aaKnown RBP12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 EBPQ15125 230 aaKnown RBP12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 ELOA3BQ3SY89 546 aa12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 FAM174BQ3ZCQ3 159 aa12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 ANKRD34AQ69YU3 496 aa12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 NEPROQ6NW34 567 aa12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 SCIMPQ6UWF3 145 aa12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 NXPE4Q6UWF7 544 aa12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 DNAJC14Q6Y2X3 702 aaPredicted RBP12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 PRUNE1Q86TP1 453 aa12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 PACS2Q86VP3 889 aa12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 GPATCH11Q8N954 259 aa12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 ELOA3Q8NG57 546 aa12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 EEF1AKMT1Q8WVE0 214 aa12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 PLPPR2Q96GM1 343 aa12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 FBXL20Q96IG2 436 aa12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 FAR2Q96K12 515 aa12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 SERINC2Q96SA4 455 aa12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 AIF1LQ9BQI0 150 aa12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 SLC39A3Q9BRY0 314 aa12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 OR2B2Q9GZK3 357 aa12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 WWTR1Q9GZV5 400 aa12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 EIF2B3Q9NR50 452 aaKnown RBP12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 SYBUQ9NX95 663 aa12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 GDF2Q9UK05 429 aaPredicted RBP12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 GUCA1BQ9UMX6 200 aa12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 SOX13Q9UN79 622 aa12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 LIPT1Q9Y234 373 aa12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 DLGAP4Q9Y2H0 992 aa12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 E7EVH7 732 aa12.34□□□□□ -0.43
VCPKMT-201ENST00000395859 SLU7O95391 586 aaKnown RBP12.34□□□□□ -0.43
VCPKMT-201ENST00000395859 TUBBP07437 444 aa12.34□□□□□ -0.43
VCPKMT-201ENST00000395859 ETS1P14921 441 aa12.34□□□□□ -0.43
VCPKMT-201ENST00000395859 ZNF708P17019 499 aa12.34□□□□□ -0.43
VCPKMT-201ENST00000395859 TCP1P17987 556 aaKnown RBP12.34□□□□□ -0.43
VCPKMT-201ENST00000395859 TBXA2RP21731 343 aa12.34□□□□□ -0.43
VCPKMT-201ENST00000395859 MSH2P43246 934 aa12.34□□□□□ -0.43
VCPKMT-201ENST00000395859 NPY2RP49146 381 aa12.34□□□□□ -0.43
VCPKMT-201ENST00000395859 ID2Q02363 134 aa12.34□□□□□ -0.43
VCPKMT-201ENST00000395859 SRYQ05066 204 aa12.34□□□□□ -0.43
VCPKMT-201ENST00000395859 WHAMMP3Q1A5X7 153 aa12.34□□□□□ -0.43
VCPKMT-201ENST00000395859 LIPNQ5VXI9 398 aa12.34□□□□□ -0.43
VCPKMT-201ENST00000395859 LRRC8EQ6NSJ5 796 aa12.34□□□□□ -0.43
VCPKMT-201ENST00000395859 ABHD17CQ6PCB6 329 aa12.34□□□□□ -0.43
VCPKMT-201ENST00000395859 VN1R5Q7Z5H4 357 aa12.34□□□□□ -0.43
VCPKMT-201ENST00000395859 TRIM42Q8IWZ5 723 aa12.34□□□□□ -0.43
VCPKMT-201ENST00000395859 DEPDC4Q8N2C3 294 aa12.34□□□□□ -0.43
VCPKMT-201ENST00000395859 CEP112Q8N8E3 955 aa12.34□□□□□ -0.43
VCPKMT-201ENST00000395859 MNS1Q8NEH6 495 aa12.34□□□□□ -0.43
VCPKMT-201ENST00000395859 OR2L5Q8NG80 312 aa12.34□□□□□ -0.43
VCPKMT-201ENST00000395859 SGMS2Q8NHU3 365 aa12.34□□□□□ -0.43
VCPKMT-201ENST00000395859 FBXL8Q96CD0 374 aa12.34□□□□□ -0.43
VCPKMT-201ENST00000395859 C1orf159Q96HA4 380 aa12.34□□□□□ -0.43
VCPKMT-201ENST00000395859 TSNARE1Q96NA8 513 aa12.34□□□□□ -0.43
VCPKMT-201ENST00000395859 PRDM7Q9NQW5 492 aa12.34□□□□□ -0.43
VCPKMT-201ENST00000395859 TEX10Q9NXF1 929 aaPredicted RBP12.34□□□□□ -0.43
VCPKMT-201ENST00000395859 TP53I11O14683 189 aa12.33□□□□□ -0.44
VCPKMT-201ENST00000395859 EMC8O43402 210 aa12.33□□□□□ -0.44
VCPKMT-201ENST00000395859 LMX1BO60663 402 aa12.33□□□□□ -0.44
VCPKMT-201ENST00000395859 CD8AP01732 235 aa12.33□□□□□ -0.44
VCPKMT-201ENST00000395859 IGHV4-31P0DP07 118 aa12.33□□□□□ -0.44
VCPKMT-201ENST00000395859 PPP3CBP16298 524 aa12.33□□□□□ -0.44
VCPKMT-201ENST00000395859 SAT1P21673 171 aa12.33□□□□□ -0.44
VCPKMT-201ENST00000395859 MGAT1P26572 445 aa12.33□□□□□ -0.44
VCPKMT-201ENST00000395859 PTGDSP41222 190 aa12.33□□□□□ -0.44
VCPKMT-201ENST00000395859 STARP49675 285 aa12.33□□□□□ -0.44
VCPKMT-201ENST00000395859 SLC37A1P57057 533 aa12.33□□□□□ -0.44
VCPKMT-201ENST00000395859 CKAP4Q07065 602 aaKnown RBP12.33□□□□□ -0.44
VCPKMT-201ENST00000395859 RBBP5Q15291 538 aaKnown RBP12.33□□□□□ -0.44
VCPKMT-201ENST00000395859 PGGHGQ32M88 737 aa12.33□□□□□ -0.44
VCPKMT-201ENST00000395859 TMEM81Q6P7N7 255 aa12.33□□□□□ -0.44
VCPKMT-201ENST00000395859 ENPP6Q6UWR7 440 aa12.33□□□□□ -0.44
VCPKMT-201ENST00000395859 C12orf54Q6X4T0 127 aa12.33□□□□□ -0.44
VCPKMT-201ENST00000395859 TMEM64Q6YI46 380 aa12.33□□□□□ -0.44
VCPKMT-201ENST00000395859 GRAMD2AQ8IUY3 354 aa12.33□□□□□ -0.44
VCPKMT-201ENST00000395859 DENND6AQ8IWF6 608 aa12.33□□□□□ -0.44
VCPKMT-201ENST00000395859 UBL4BQ8N7F7 174 aa12.33□□□□□ -0.44
VCPKMT-201ENST00000395859 ZNF610Q8N9Z0 462 aa12.33□□□□□ -0.44
VCPKMT-201ENST00000395859 RAB3IL1Q8TBN0 382 aa12.33□□□□□ -0.44
VCPKMT-201ENST00000395859 C11orf24Q96F05 449 aaPredicted RBP12.33□□□□□ -0.44
VCPKMT-201ENST00000395859 GRIP2Q9C0E4 1043 aa12.33□□□□□ -0.44
VCPKMT-201ENST00000395859 LACRTQ9GZZ8 138 aa12.33□□□□□ -0.44
VCPKMT-201ENST00000395859 LYRM4Q9HD34 91 aa12.33□□□□□ -0.44
VCPKMT-201ENST00000395859 FBXO6Q9NRD1 293 aaPredicted RBP12.33□□□□□ -0.44
VCPKMT-201ENST00000395859 COMMD10Q9Y6G5 202 aa12.33□□□□□ -0.44
VCPKMT-201ENST00000395859 A0A088AWK7 358 aa12.32□□□□□ -0.44
VCPKMT-201ENST00000395859 MIF4GDA9UHW6 222 aaKnown RBP12.32□□□□□ -0.44
VCPKMT-201ENST00000395859 DYNC1I1O14576 645 aa12.32□□□□□ -0.44
VCPKMT-201ENST00000395859 FGF17O60258 216 aa12.32□□□□□ -0.44
VCPKMT-201ENST00000395859 ZNF16P17020 682 aaPredicted RBP12.32□□□□□ -0.44
VCPKMT-201ENST00000395859 ZNF10P21506 573 aaPredicted RBP12.32□□□□□ -0.44
VCPKMT-201ENST00000395859 MASP1P48740 699 aa12.32□□□□□ -0.44
VCPKMT-201ENST00000395859 PLA2G16P53816 162 aa12.32□□□□□ -0.44
VCPKMT-201ENST00000395859 AP1S2P56377 157 aa12.32□□□□□ -0.44
VCPKMT-201ENST00000395859 RCN2Q14257 317 aa12.32□□□□□ -0.44
VCPKMT-201ENST00000395859 TOMM20Q15388 145 aa12.32□□□□□ -0.44
VCPKMT-201ENST00000395859 FAM120AOSQ5T036 256 aa12.32□□□□□ -0.44
VCPKMT-201ENST00000395859 ZNF470Q6ECI4 717 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms