RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 PRDM9Q9NQV7 894 aa14.24□□□□□ -0.13
SCAF11-204ENST00000395454 ACSL6Q9UKU0 697 aa14.24□□□□□ -0.13
SCAF11-204ENST00000395454 PADI2Q9Y2J8 665 aa14.24□□□□□ -0.13
SCAF11-204ENST00000395454 DCDC2BA2VCK2 349 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 PLOD2O00469 737 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 TOX3O15405 576 aaPredicted RBP14.23□□□□□ -0.13
SCAF11-204ENST00000395454 ZNF682O95780 498 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 SMIM10L1P0DMW3 83 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 CDK4P11802 303 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 CRATP43155 626 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 PDX1P52945 283 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 TGM3Q08188 693 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 HES3Q5TGS1 186 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 FCRL6Q6DN72 434 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 FBXO42Q6P3S6 717 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 SHQ1Q6PI26 577 aaKnown RBP14.23□□□□□ -0.13
SCAF11-204ENST00000395454 TMEM64Q6YI46 380 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 CARFQ8N187 725 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 MAGEE2Q8TD90 523 aaPredicted RBP14.23□□□□□ -0.13
SCAF11-204ENST00000395454 NRBF2Q96F24 287 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 SMIM10Q96HG1 83 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 RBM4BQ9BQ04 359 aaKnown RBP14.23□□□□□ -0.13
SCAF11-204ENST00000395454 RBM4Q9BWF3 364 aaKnown RBP14.23□□□□□ -0.13
SCAF11-204ENST00000395454 A4GALTQ9NPC4 353 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 SLC35C2Q9NQQ7 365 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 LYARQ9NX58 379 aaKnown RBP14.23□□□□□ -0.13
SCAF11-204ENST00000395454 IFT80Q9P2H3 777 aaPredicted RBP14.23□□□□□ -0.13
SCAF11-204ENST00000395454 CES1P1Q9UKY3 287 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 MYO1GB0I1T2 1018 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 H6PDO95479 791 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 SERPIND1P05546 499 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 GNAO1P09471 354 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 LINGO3P0C6S8 592 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 CHI3L1P36222 383 aaPredicted RBP14.23□□□□□ -0.13
SCAF11-204ENST00000395454 MLLT3P42568 568 aaPredicted RBP14.23□□□□□ -0.13
SCAF11-204ENST00000395454 MANFP55145 182 aaKnown RBP14.23□□□□□ -0.13
SCAF11-204ENST00000395454 ITGA1P56199 1179 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 KCNJ10P78508 379 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 HSD11B2P80365 405 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 VLDLRP98155 873 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 ZFP36L1Q07352 338 aaKnown RBP14.23□□□□□ -0.13
SCAF11-204ENST00000395454 EPS8Q12929 822 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 SCARB2Q14108 478 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 OR2T5Q6IEZ7 315 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 ASPGQ86U10 573 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 HIPK1Q86Z02 1210 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 DHRSXQ8N5I4 330 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 OR2T29Q8NH02 315 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 OR8K5Q8NH50 307 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 AMDHD1Q96NU7 426 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 FCRL4Q96PJ5 515 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 DOHHQ9BU89 302 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 FAM192AQ9GZU8 254 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 ZNF768Q9H5H4 540 aaKnown RBP14.23□□□□□ -0.13
SCAF11-204ENST00000395454 FAM60AQ9NP50 221 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 PDE7BQ9NP56 450 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 ADPRHL2Q9NX46 363 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 ZNF451Q9Y4E5 1061 aa14.23□□□□□ -0.13
SCAF11-204ENST00000395454 SPTBN4Q9H254 2564 aa14.22□□□□□ -0.13
SCAF11-204ENST00000395454 A0A1W2PR48 441 aa14.22□□□□□ -0.13
SCAF11-204ENST00000395454 H3BNH8 94 aa14.22□□□□□ -0.13
SCAF11-204ENST00000395454 B4GALT2O60909 372 aa14.22□□□□□ -0.13
SCAF11-204ENST00000395454 CTSVO60911 334 aa14.22□□□□□ -0.13
SCAF11-204ENST00000395454 DKK1O94907 266 aa14.22□□□□□ -0.13
SCAF11-204ENST00000395454 SNAP29O95721 258 aa14.22□□□□□ -0.13
SCAF11-204ENST00000395454 FABP3P05413 133 aa14.22□□□□□ -0.13
SCAF11-204ENST00000395454 ALDH9A1P49189 494 aa14.22□□□□□ -0.13
SCAF11-204ENST00000395454 IST1P53990 364 aa14.22□□□□□ -0.13
SCAF11-204ENST00000395454 SELENOWP63302 87 aa14.22□□□□□ -0.13
SCAF11-204ENST00000395454 CDK6Q00534 326 aa14.22□□□□□ -0.13
SCAF11-204ENST00000395454 RGS1Q08116 209 aa14.22□□□□□ -0.13
SCAF11-204ENST00000395454 SLAMF1Q13291 335 aa14.22□□□□□ -0.13
SCAF11-204ENST00000395454 KCNAB1Q14722 419 aa14.22□□□□□ -0.13
SCAF11-204ENST00000395454 DEFB110Q30KQ9 67 aa14.22□□□□□ -0.13
SCAF11-204ENST00000395454 ZC3H12BQ5HYM0 836 aaKnown RBP14.22□□□□□ -0.13
SCAF11-204ENST00000395454 ARHGAP22Q7Z5H3 698 aa14.22□□□□□ -0.13
SCAF11-204ENST00000395454 VTCN1Q7Z7D3 282 aa14.22□□□□□ -0.13
SCAF11-204ENST00000395454 TMEM179BQ7Z7N9 219 aa14.22□□□□□ -0.13
SCAF11-204ENST00000395454 PATL1Q86TB9 770 aaKnown RBP14.22□□□□□ -0.13
SCAF11-204ENST00000395454 STK32CQ86UX6 486 aa14.22□□□□□ -0.13
SCAF11-204ENST00000395454 OR5AK3PQ8NH89 298 aa14.22□□□□□ -0.13
SCAF11-204ENST00000395454 SDCCAG3Q96C92 435 aa14.22□□□□□ -0.13
SCAF11-204ENST00000395454 TCTN2Q96GX1 697 aa14.22□□□□□ -0.13
SCAF11-204ENST00000395454 ROGDIQ9GZN7 287 aa14.22□□□□□ -0.13
SCAF11-204ENST00000395454 VNN3Q9NY84 501 aa14.22□□□□□ -0.13
SCAF11-204ENST00000395454 ABCG2Q9UNQ0 655 aa14.22□□□□□ -0.13
SCAF11-204ENST00000395454 CLCA2Q9UQC9 943 aa14.22□□□□□ -0.13
SCAF11-204ENST00000395454 ATG4BQ9Y4P1 393 aa14.22□□□□□ -0.13
SCAF11-204ENST00000395454 SPTBN2O15020 2390 aa14.22□□□□□ -0.13
SCAF11-204ENST00000395454 KIF26BQ2KJY2 2108 aa14.22□□□□□ -0.13
SCAF11-204ENST00000395454 COL27A1Q8IZC6 1860 aaPredicted RBP14.21□□□□□ -0.13
SCAF11-204ENST00000395454 A0A0J9YVX5 310 aa14.21□□□□□ -0.13
SCAF11-204ENST00000395454 SUV39H1O43463 412 aa14.21□□□□□ -0.13
SCAF11-204ENST00000395454 MT-CO3P00414 261 aa14.21□□□□□ -0.13
SCAF11-204ENST00000395454 ANKRD34CP0C6C1 535 aa14.21□□□□□ -0.13
SCAF11-204ENST00000395454 THRBP10828 461 aa14.21□□□□□ -0.13
SCAF11-204ENST00000395454 NELFEP18615 380 aaKnown RBP14.21□□□□□ -0.13
SCAF11-204ENST00000395454 DSTNP60981 165 aa14.21□□□□□ -0.13
SCAF11-204ENST00000395454 KCTD21Q4G0X4 260 aa14.21□□□□□ -0.13
SCAF11-204ENST00000395454 OTUD3Q5T2D3 398 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms