RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 AHCYL1O43865 530 aa15.04■□□□□ -0
SMARCD1-202ENST00000394963 SAGP10523 405 aaPredicted RBP15.04■□□□□ -0
SMARCD1-202ENST00000394963 SUZ12Q15022 739 aaKnown RBP15.04■□□□□ -0
SMARCD1-202ENST00000394963 ALG11Q2TAA5 492 aa15.04■□□□□ -0
SMARCD1-202ENST00000394963 B3GLCTQ6Y288 498 aa15.04■□□□□ -0
SMARCD1-202ENST00000394963 TP53I13Q8NBR0 393 aaPredicted RBP15.04■□□□□ -0
SMARCD1-202ENST00000394963 PSD4Q8NDX1 1056 aa15.04■□□□□ -0
SMARCD1-202ENST00000394963 TREX2Q9BQ50 279 aaPredicted RBP15.04■□□□□ -0
SMARCD1-202ENST00000394963 GSDMCQ9BYG8 508 aa15.04■□□□□ -0
SMARCD1-202ENST00000394963 LMAN2LQ9H0V9 348 aa15.04■□□□□ -0
SMARCD1-202ENST00000394963 EPHX3Q9H6B9 360 aa15.04■□□□□ -0
SMARCD1-202ENST00000394963 MVB12BQ9H7P6 319 aa15.04■□□□□ -0
SMARCD1-202ENST00000394963 NEUROD4Q9HD90 331 aa15.04■□□□□ -0
SMARCD1-202ENST00000394963 CNIH4Q9P003 139 aa15.04■□□□□ -0
SMARCD1-202ENST00000394963 SLC35F4A4IF30 521 aa15.04■□□□□ -0
SMARCD1-202ENST00000394963 STSP08842 583 aa15.04■□□□□ -0
SMARCD1-202ENST00000394963 CD247P20963 164 aa15.04■□□□□ -0
SMARCD1-202ENST00000394963 ZNF10P21506 573 aaPredicted RBP15.04■□□□□ -0
SMARCD1-202ENST00000394963 SLC5A2P31639 672 aa15.04■□□□□ -0
SMARCD1-202ENST00000394963 ZNF267Q14586 743 aaPredicted RBP15.04■□□□□ -0
SMARCD1-202ENST00000394963 ZNF793Q6ZN11 406 aa15.04■□□□□ -0
SMARCD1-202ENST00000394963 CBLL1Q75N03 491 aa15.04■□□□□ -0
SMARCD1-202ENST00000394963 RNF44Q7L0R7 432 aa15.04■□□□□ -0
SMARCD1-202ENST00000394963 ADGRF3Q8IZF5 1079 aa15.04■□□□□ -0
SMARCD1-202ENST00000394963 GALNT15Q8N3T1 639 aa15.04■□□□□ -0
SMARCD1-202ENST00000394963 CSNK1A1LQ8N752 337 aa15.04■□□□□ -0
SMARCD1-202ENST00000394963 OR5M3Q8NGP4 307 aa15.04■□□□□ -0
SMARCD1-202ENST00000394963 PIK3R3Q92569 461 aa15.04■□□□□ -0
SMARCD1-202ENST00000394963 RAB11FIP5Q9BXF6 653 aa15.04■□□□□ -0
SMARCD1-202ENST00000394963 MYNNQ9NPC7 610 aa15.04■□□□□ -0
SMARCD1-202ENST00000394963 RTTNQ86VV8 2226 aa15.03■□□□□ -0
SMARCD1-202ENST00000394963 H1F0P07305 194 aaKnown RBP15.03■□□□□ -0
SMARCD1-202ENST00000394963 CENPAP49450 140 aa15.03■□□□□ -0
SMARCD1-202ENST00000394963 ENTPD1P49961 510 aa15.03■□□□□ -0
SMARCD1-202ENST00000394963 LRIF1Q5T3J3 769 aa15.03■□□□□ -0
SMARCD1-202ENST00000394963 C1orf189Q5VU69 101 aa15.03■□□□□ -0
SMARCD1-202ENST00000394963 FRMPD2BQ6IN97 320 aa15.03■□□□□ -0
SMARCD1-202ENST00000394963 VRK2Q86Y07 508 aa15.03■□□□□ -0
SMARCD1-202ENST00000394963 THAP3Q8WTV1 239 aaPredicted RBP15.03■□□□□ -0
SMARCD1-202ENST00000394963 PNO1Q9NRX1 252 aaKnown RBP15.03■□□□□ -0
SMARCD1-202ENST00000394963 ZNF624Q9P2J8 865 aaPredicted RBP15.03■□□□□ -0
SMARCD1-202ENST00000394963 NTNG1Q9Y2I2 539 aa15.03■□□□□ -0
SMARCD1-202ENST00000394963 TRANK1O15050 2925 aa15.03■□□□□ -0
SMARCD1-202ENST00000394963 PSMA3P25788 255 aa15.03■□□□□ -0
SMARCD1-202ENST00000394963 PRSS53Q2L4Q9 553 aa15.03■□□□□ -0
SMARCD1-202ENST00000394963 SPRED1Q7Z699 444 aa15.03■□□□□ -0
SMARCD1-202ENST00000394963 SIMC1Q8NDZ2 872 aa15.03■□□□□ -0
SMARCD1-202ENST00000394963 VOPP1Q96AW1 172 aa15.03■□□□□ -0
SMARCD1-202ENST00000394963 SLC22A18Q96BI1 424 aa15.03■□□□□ -0
SMARCD1-202ENST00000394963 BMFQ96LC9 184 aa15.03■□□□□ -0
SMARCD1-202ENST00000394963 NLGN3Q9NZ94 848 aa15.03■□□□□ -0
SMARCD1-202ENST00000394963 ATP6V1HQ9UI12 483 aa15.03■□□□□ -0
SMARCD1-202ENST00000394963 WDR45Q9Y484 360 aa15.03■□□□□ -0
SMARCD1-202ENST00000394963 HEBP2Q9Y5Z4 205 aa15.03■□□□□ -0
SMARCD1-202ENST00000394963 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.03■□□□□ -0
SMARCD1-202ENST00000394963 ATP5A1P25705 553 aaKnown RBP15.03■□□□□ -0
SMARCD1-202ENST00000394963 C21orf59P57076 290 aa15.03■□□□□ -0
SMARCD1-202ENST00000394963 CTU2Q2VPK5 515 aaKnown RBP15.03■□□□□ -0
SMARCD1-202ENST00000394963 SLCO6A1Q86UG4 719 aa15.03■□□□□ -0
SMARCD1-202ENST00000394963 SHISA5Q8N114 240 aa15.03■□□□□ -0
SMARCD1-202ENST00000394963 ZG16BQ96DA0 208 aa15.03■□□□□ -0
SMARCD1-202ENST00000394963 ZNF300Q96RE9 604 aaPredicted RBP15.03■□□□□ -0
SMARCD1-202ENST00000394963 SH3GL3Q99963 347 aa15.03■□□□□ -0
SMARCD1-202ENST00000394963 TEX101Q9BY14 249 aa15.03■□□□□ -0
SMARCD1-202ENST00000394963 SLC6A20Q9NP91 592 aa15.03■□□□□ -0
SMARCD1-202ENST00000394963 SIRT5Q9NXA8 310 aa15.03■□□□□ -0
SMARCD1-202ENST00000394963 NAALAD2Q9Y3Q0 740 aa15.03■□□□□ -0
SMARCD1-202ENST00000394963 H0YGG7 62 aa15.02■□□□□ -0
SMARCD1-202ENST00000394963 FOXE1O00358 373 aaPredicted RBP15.02■□□□□ -0
SMARCD1-202ENST00000394963 VILLO15195 856 aa15.02■□□□□ -0
SMARCD1-202ENST00000394963 JRKO75564 520 aa15.02■□□□□ -0
SMARCD1-202ENST00000394963 PDE9AO76083 593 aa15.02■□□□□ -0
SMARCD1-202ENST00000394963 PRSS23O95084 383 aa15.02■□□□□ -0
SMARCD1-202ENST00000394963 ARF3P61204 181 aaPredicted RBP15.02■□□□□ -0
SMARCD1-202ENST00000394963 CHRNEQ04844 493 aa15.02■□□□□ -0
SMARCD1-202ENST00000394963 CDK5R2Q13319 367 aa15.02■□□□□ -0
SMARCD1-202ENST00000394963 MPEG1Q2M385 716 aa15.02■□□□□ -0
SMARCD1-202ENST00000394963 VN1R5Q7Z5H4 357 aa15.02■□□□□ -0
SMARCD1-202ENST00000394963 SNX29P2Q8IUI4 249 aa15.02■□□□□ -0
SMARCD1-202ENST00000394963 ZNF655Q8N720 491 aaPredicted RBP15.02■□□□□ -0
SMARCD1-202ENST00000394963 TTLQ8NG68 377 aa15.02■□□□□ -0
SMARCD1-202ENST00000394963 OR2L5Q8NG80 312 aa15.02■□□□□ -0
SMARCD1-202ENST00000394963 OR4K14Q8NGD5 310 aa15.02■□□□□ -0
SMARCD1-202ENST00000394963 HCAR2Q8TDS4 363 aa15.02■□□□□ -0
SMARCD1-202ENST00000394963 ZDHHC1Q8WTX9 485 aa15.02■□□□□ -0
SMARCD1-202ENST00000394963 ANKHQ9HCJ1 492 aa15.02■□□□□ -0
SMARCD1-202ENST00000394963 NDUFAF4Q9P032 175 aa15.02■□□□□ -0
SMARCD1-202ENST00000394963 ZNF229Q9UJW7 825 aa15.02■□□□□ -0
SMARCD1-202ENST00000394963 ST14Q9Y5Y6 855 aa15.02■□□□□ -0
SMARCD1-202ENST00000394963 SCN8AQ9UQD0 1980 aa15.02■□□□□ -0
SMARCD1-202ENST00000394963 TRBV4-1A0A0J9YWV2 114 aa15.02□□□□□ -0.01
SMARCD1-202ENST00000394963 H3BSH0 61 aa15.02□□□□□ -0.01
SMARCD1-202ENST00000394963 DNAJB6O75190 326 aa15.02□□□□□ -0.01
SMARCD1-202ENST00000394963 NTN1O95631 604 aa15.02□□□□□ -0.01
SMARCD1-202ENST00000394963 CFIP05156 583 aa15.02□□□□□ -0.01
SMARCD1-202ENST00000394963 GABRA3P34903 492 aa15.02□□□□□ -0.01
SMARCD1-202ENST00000394963 TNFRSF4P43489 277 aa15.02□□□□□ -0.01
SMARCD1-202ENST00000394963 GPR4P46093 362 aa15.02□□□□□ -0.01
SMARCD1-202ENST00000394963 CMPK2Q5EBM0 449 aa15.02□□□□□ -0.01
SMARCD1-202ENST00000394963 HSDL2Q6YN16 418 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms