RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 BRWD1Q9NSI6 2320 aa17.38■□□□□ 0.37
PCDHA1-202ENST00000394633 CKAP5Q14008 2032 aa17.38■□□□□ 0.37
PCDHA1-202ENST00000394633 RTCAO00442 366 aaKnown RBP17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 PLD2O14939 933 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 CDRT1O95170 752 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 TBX6O95947 436 aaPredicted RBP17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 DDCP20711 480 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 KCNJ5P48544 419 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 MANFP55145 182 aaKnown RBP17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 RUNX1T1Q06455 604 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 GLYR1Q49A26 553 aaPredicted RBP17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 TRMT11Q7Z4G4 463 aaKnown RBP17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 ZNF366Q8N895 744 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 FAM181AQ8N9Y4 354 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 SLC7A13Q8TCU3 470 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 ZNF354BQ96LW1 612 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 PHOX2BQ99453 314 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 ZNF717Q9BY31 904 aaPredicted RBP17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 MIXL1Q9H2W2 232 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 MVB12BQ9H7P6 319 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 TVP23BQ9NYZ1 205 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 MSRAQ9UJ68 235 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 ANHXE9PGG2 379 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 K7ESM1 405 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 HMGN4O00479 90 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 MYL12BO14950 172 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 HOXC11O43248 304 aaPredicted RBP17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 PRKYO43930 277 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 GSTM5P46439 218 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 HYAL2Q12891 473 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 TARDBPQ13148 414 aaKnown RBP eCLIP17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 DUSP6Q16828 381 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 ZFP69Q49AA0 526 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 FLYWCH1Q4VC44 716 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 PRAMEF14Q5SWL7 426 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 PRAMEF13Q5VWM6 474 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 PARS2Q7L3T8 475 aaKnown RBP17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 RTL10Q7L3V2 364 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 C6orf120Q7Z4R8 191 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 NRSN1Q8IZ57 195 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 OR52I1Q8NGK6 324 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 UBE2E3Q969T4 207 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 SLC25A46Q96AG3 418 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 ABCB9Q9NP78 766 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 SPHK2Q9NRA0 654 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 SIRT3Q9NTG7 399 aaPredicted RBP17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 TXNL4BQ9NX01 149 aaKnown RBP17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 DKK3Q9UBP4 350 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 ACAD8Q9UKU7 415 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 HCN2Q9UL51 889 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 PLAGL1Q9UM63 463 aa17.37■□□□□ 0.37
PCDHA1-202ENST00000394633 MEIOCA2RUB1 952 aa17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 PDE9AO76083 593 aa17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 CLEC2LP0C7M8 214 aa17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 TNNI3P19429 210 aa17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 HSPB3Q12988 150 aa17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 C1DQ13901 141 aaKnown RBP17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 LY6G5CQ5SRR4 150 aa17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 FAM129CQ86XR2 697 aa17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 IL17RCQ8NAC3 791 aa17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 OR9Q1Q8NGQ5 310 aa17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 LILRB4Q8NHJ6 448 aa17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 TM4SF18Q96CE8 201 aa17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 DTD2Q96FN9 168 aa17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 DMRTB1Q96MA1 342 aa17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 TEFMQ96QE5 360 aaKnown RBP17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 MMP28Q9H239 520 aa17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 C5AR2Q9P296 337 aa17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 TRIOBPQ9H2D6 2365 aa17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 PDPK1O15530 556 aa17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 TLX2O43763 284 aaPredicted RBP17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 MSL3P1P0C860 447 aa17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 ETV5P41161 510 aa17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 ETV1P50549 477 aa17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 SLAMF1Q13291 335 aa17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 TBRG1Q3YBR2 411 aa17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 KIAA0907Q7Z7F0 614 aaPredicted RBP17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 COMTD1Q86VU5 262 aa17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 SETD7Q8WTS6 366 aaKnown RBP17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 SMG7Q92540 1137 aaKnown RBP17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 MSLNLQ96KJ4 702 aa17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 COQ10AQ96MF6 247 aa17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 ACAT2Q9BWD1 397 aa17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 SERHL2Q9H4I8 314 aa17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 IGFLR1Q9H665 355 aa17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 A4GNTQ9UNA3 340 aa17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 DIMT1Q9UNQ2 313 aaKnown RBP17.36■□□□□ 0.37
PCDHA1-202ENST00000394633 HMX3A6NHT5 357 aa17.35■□□□□ 0.37
PCDHA1-202ENST00000394633 TFECO14948 347 aaPredicted RBP17.35■□□□□ 0.37
PCDHA1-202ENST00000394633 PI15O43692 258 aa17.35■□□□□ 0.37
PCDHA1-202ENST00000394633 SH3BP5O60239 455 aa17.35■□□□□ 0.37
PCDHA1-202ENST00000394633 MMP20O60882 483 aa17.35■□□□□ 0.37
PCDHA1-202ENST00000394633 IL1AP01583 271 aa17.35■□□□□ 0.37
PCDHA1-202ENST00000394633 ACADLP28330 430 aa17.35■□□□□ 0.37
PCDHA1-202ENST00000394633 MAPK12P53778 367 aa17.35■□□□□ 0.37
PCDHA1-202ENST00000394633 HNRNPA0Q13151 305 aaKnown RBP17.35■□□□□ 0.37
PCDHA1-202ENST00000394633 PIN1Q13526 163 aaPredicted RBP17.35■□□□□ 0.37
PCDHA1-202ENST00000394633 RAB30Q15771 203 aa17.35■□□□□ 0.37
PCDHA1-202ENST00000394633 FAM131AQ6UXB0 335 aa17.35■□□□□ 0.37
PCDHA1-202ENST00000394633 USP30Q70CQ3 517 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms