RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 FAM13CQ8NE31 585 aa16.06■□□□□ 0.16
SNRPA1-202ENST00000394082 CHDHQ8NE62 594 aaPredicted RBP16.06■□□□□ 0.16
SNRPA1-202ENST00000394082 WDR20Q8TBZ3 569 aa16.06■□□□□ 0.16
SNRPA1-202ENST00000394082 NXNL1Q96CM4 212 aa16.06■□□□□ 0.16
SNRPA1-202ENST00000394082 ZNF597Q96LX8 424 aa16.06■□□□□ 0.16
SNRPA1-202ENST00000394082 GAL3ST4Q96RP7 486 aa16.06■□□□□ 0.16
SNRPA1-202ENST00000394082 TMUB1Q9BVT8 246 aa16.06■□□□□ 0.16
SNRPA1-202ENST00000394082 SNX15Q9NRS6 342 aa16.06■□□□□ 0.16
SNRPA1-202ENST00000394082 ALKBH4Q9NXW9 302 aa16.06■□□□□ 0.16
SNRPA1-202ENST00000394082 UTP11Q9Y3A2 253 aaKnown RBP16.06■□□□□ 0.16
SNRPA1-202ENST00000394082 NIPBLQ6KC79 2804 aaeCLIP16.05■□□□□ 0.16
SNRPA1-202ENST00000394082 C2orf92A0A1B0GVN3 265 aa16.05■□□□□ 0.16
SNRPA1-202ENST00000394082 DVL2O14641 736 aa16.05■□□□□ 0.16
SNRPA1-202ENST00000394082 TMPRSS11DO60235 418 aa16.05■□□□□ 0.16
SNRPA1-202ENST00000394082 CDH16O75309 829 aa16.05■□□□□ 0.16
SNRPA1-202ENST00000394082 FAM155BO75949 473 aa16.05■□□□□ 0.16
SNRPA1-202ENST00000394082 SEMA3DO95025 777 aa16.05■□□□□ 0.16
SNRPA1-202ENST00000394082 HPNP05981 417 aa16.05■□□□□ 0.16
SNRPA1-202ENST00000394082 GMPRP36959 345 aa16.05■□□□□ 0.16
SNRPA1-202ENST00000394082 MAGEA4P43358 317 aa16.05■□□□□ 0.16
SNRPA1-202ENST00000394082 FUT7Q11130 342 aa16.05■□□□□ 0.16
SNRPA1-202ENST00000394082 NHSL2Q5HYW2 709 aa16.05■□□□□ 0.16
SNRPA1-202ENST00000394082 OR52E8Q6IFG1 317 aa16.05■□□□□ 0.16
SNRPA1-202ENST00000394082 CYP20A1Q6UW02 462 aa16.05■□□□□ 0.16
SNRPA1-202ENST00000394082 WDR53Q7Z5U6 358 aaPredicted RBP16.05■□□□□ 0.16
SNRPA1-202ENST00000394082 NUDT13Q86X67 352 aa16.05■□□□□ 0.16
SNRPA1-202ENST00000394082 LACC1Q8IV20 430 aa16.05■□□□□ 0.16
SNRPA1-202ENST00000394082 RNF175Q8N4F7 328 aa16.05■□□□□ 0.16
SNRPA1-202ENST00000394082 FBF1Q8TES7 1133 aa16.05■□□□□ 0.16
SNRPA1-202ENST00000394082 NTNG2Q96CW9 530 aa16.05■□□□□ 0.16
SNRPA1-202ENST00000394082 SH3GL2Q99962 352 aa16.05■□□□□ 0.16
SNRPA1-202ENST00000394082 POLDIP3Q9BY77 421 aaKnown RBP16.05■□□□□ 0.16
SNRPA1-202ENST00000394082 PRDM14Q9GZV8 571 aa16.05■□□□□ 0.16
SNRPA1-202ENST00000394082 UBQLN3Q9H347 655 aa16.05■□□□□ 0.16
SNRPA1-202ENST00000394082 CXorf21Q9HAI6 301 aa16.05■□□□□ 0.16
SNRPA1-202ENST00000394082 RASSF1Q9NS23 344 aa16.05■□□□□ 0.16
SNRPA1-202ENST00000394082 NCKAP5O14513 1909 aa16.04■□□□□ 0.16
SNRPA1-202ENST00000394082 EEDO75530 441 aaKnown RBP16.04■□□□□ 0.16
SNRPA1-202ENST00000394082 C2P06681 752 aa16.04■□□□□ 0.16
SNRPA1-202ENST00000394082 GFAPP14136 432 aa16.04■□□□□ 0.16
SNRPA1-202ENST00000394082 ASCL1P50553 236 aa16.04■□□□□ 0.16
SNRPA1-202ENST00000394082 PLTPP55058 493 aa16.04■□□□□ 0.16
SNRPA1-202ENST00000394082 RPP38P78345 283 aaKnown RBP16.04■□□□□ 0.16
SNRPA1-202ENST00000394082 MRPS25P82663 173 aaKnown RBP16.04■□□□□ 0.16
SNRPA1-202ENST00000394082 GUCY2DQ02846 1103 aa16.04■□□□□ 0.16
SNRPA1-202ENST00000394082 CRYZQ08257 329 aaKnown RBP16.04■□□□□ 0.16
SNRPA1-202ENST00000394082 DUSP8Q13202 625 aa16.04■□□□□ 0.16
SNRPA1-202ENST00000394082 PFKFB4Q16877 469 aa16.04■□□□□ 0.16
SNRPA1-202ENST00000394082 ACSF3Q4G176 576 aaPredicted RBP16.04■□□□□ 0.16
SNRPA1-202ENST00000394082 TMEM81Q6P7N7 255 aa16.04■□□□□ 0.16
SNRPA1-202ENST00000394082 MYLK4Q86YV6 388 aaPredicted RBP16.04■□□□□ 0.16
SNRPA1-202ENST00000394082 FBXO25Q8TCJ0 367 aa16.04■□□□□ 0.16
SNRPA1-202ENST00000394082 SPPL2AQ8TCT8 520 aa16.04■□□□□ 0.16
SNRPA1-202ENST00000394082 FAM222BQ8WU58 562 aa16.04■□□□□ 0.16
SNRPA1-202ENST00000394082 DIO2Q92813 273 aa16.04■□□□□ 0.16
SNRPA1-202ENST00000394082 RNASE6Q93091 150 aaKnown RBP16.04■□□□□ 0.16
SNRPA1-202ENST00000394082 SERPINI1Q99574 410 aa16.04■□□□□ 0.16
SNRPA1-202ENST00000394082 TIMP4Q99727 224 aa16.04■□□□□ 0.16
SNRPA1-202ENST00000394082 ANGPTL4Q9BY76 406 aa16.04■□□□□ 0.16
SNRPA1-202ENST00000394082 RAB17Q9H0T7 212 aa16.04■□□□□ 0.16
SNRPA1-202ENST00000394082 SLC6A15Q9H2J7 730 aa16.04■□□□□ 0.16
SNRPA1-202ENST00000394082 IPPKQ9H8X2 491 aa16.04■□□□□ 0.16
SNRPA1-202ENST00000394082 ZNF358Q9NW07 568 aa16.04■□□□□ 0.16
SNRPA1-202ENST00000394082 FETUBQ9UGM5 382 aa16.04■□□□□ 0.16
SNRPA1-202ENST00000394082 ST6GALNAC2Q9UJ37 374 aa16.04■□□□□ 0.16
SNRPA1-202ENST00000394082 NPFFR2Q9Y5X5 522 aa16.04■□□□□ 0.16
SNRPA1-202ENST00000394082 NINQ8N4C6 2090 aa16.03■□□□□ 0.16
SNRPA1-202ENST00000394082 PRKRAO75569 313 aaKnown RBP16.03■□□□□ 0.16
SNRPA1-202ENST00000394082 KLHL2O95198 593 aa16.03■□□□□ 0.16
SNRPA1-202ENST00000394082 AIFM1O95831 613 aa16.03■□□□□ 0.16
SNRPA1-202ENST00000394082 CD99P14209 185 aa16.03■□□□□ 0.16
SNRPA1-202ENST00000394082 NAGAP17050 411 aa16.03■□□□□ 0.16
SNRPA1-202ENST00000394082 GDF1P27539 372 aa16.03■□□□□ 0.16
SNRPA1-202ENST00000394082 CDK9P50750 372 aaKnown RBP16.03■□□□□ 0.16
SNRPA1-202ENST00000394082 NRG3P56975 720 aa16.03■□□□□ 0.16
SNRPA1-202ENST00000394082 GTF2H2Q13888 395 aa16.03■□□□□ 0.16
SNRPA1-202ENST00000394082 DAZAP2Q15038 168 aaPredicted RBP16.03■□□□□ 0.16
SNRPA1-202ENST00000394082 CPSF6Q16630 551 aaKnown RBP eCLIP16.03■□□□□ 0.16
SNRPA1-202ENST00000394082 FLYWCH1Q4VC44 716 aa16.03■□□□□ 0.16
SNRPA1-202ENST00000394082 NSUN5P2Q63ZY6 315 aa16.03■□□□□ 0.16
SNRPA1-202ENST00000394082 VASNQ6EMK4 673 aa16.03■□□□□ 0.16
SNRPA1-202ENST00000394082 GTF2H2CQ6P1K8 395 aa16.03■□□□□ 0.16
SNRPA1-202ENST00000394082 KLC3Q6P597 504 aa16.03■□□□□ 0.16
SNRPA1-202ENST00000394082 POMZP3Q6PJE2 187 aa16.03■□□□□ 0.16
SNRPA1-202ENST00000394082 PACS2Q86VP3 889 aa16.03■□□□□ 0.16
SNRPA1-202ENST00000394082 ZZZ3Q8IYH5 903 aa16.03■□□□□ 0.16
SNRPA1-202ENST00000394082 ZNF615Q8N8J6 731 aa16.03■□□□□ 0.16
SNRPA1-202ENST00000394082 RELL2Q8NC24 303 aaPredicted RBP16.03■□□□□ 0.16
SNRPA1-202ENST00000394082 OR7G1Q8NGA0 311 aa16.03■□□□□ 0.16
SNRPA1-202ENST00000394082 KCTD4Q8WVF5 259 aa16.03■□□□□ 0.16
SNRPA1-202ENST00000394082 ADIPOR1Q96A54 375 aa16.03■□□□□ 0.16
SNRPA1-202ENST00000394082 JSRP1Q96MG2 331 aaPredicted RBP16.03■□□□□ 0.16
SNRPA1-202ENST00000394082 CLEC4MQ9H2X3 399 aaPredicted RBP16.03■□□□□ 0.16
SNRPA1-202ENST00000394082 CRIM1Q9NZV1 1036 aa16.03■□□□□ 0.16
SNRPA1-202ENST00000394082 MTRF1LQ9UGC7 380 aaKnown RBP16.03■□□□□ 0.16
SNRPA1-202ENST00000394082 ADAM29Q9UKF5 820 aa16.03■□□□□ 0.16
SNRPA1-202ENST00000394082 HRNRQ86YZ3 2850 aaPredicted RBP16.03■□□□□ 0.16
SNRPA1-202ENST00000394082 HMX2A2RU54 273 aa16.02■□□□□ 0.16
SNRPA1-202ENST00000394082 CD8B2A6NJW9 211 aa16.02■□□□□ 0.16
SNRPA1-202ENST00000394082 GLOD5A6NK44 160 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms