RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 SLC38A5Q8WUX1 472 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 PEX11GQ96HA9 241 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 ZNF285Q96NJ3 590 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 C9orf16Q9BUW7 83 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 CHRNA10Q9GZZ6 450 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 A4GALTQ9NPC4 353 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 DNAJB9Q9UBS3 223 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 RAB23Q9ULC3 237 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 LRCH1Q9Y2L9 728 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 MN1Q10571 1320 aaPredicted RBP8.12□□□□□ -1.11
TDP1-203ENST00000393454 SOCS2O14508 198 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 FOXS1O43638 330 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 GCM2O75603 506 aaPredicted RBP8.12□□□□□ -1.11
TDP1-203ENST00000393454 CDC123O75794 336 aaPredicted RBP8.12□□□□□ -1.11
TDP1-203ENST00000393454 NSA2O95478 260 aaKnown RBP8.12□□□□□ -1.11
TDP1-203ENST00000393454 IFNA14P01570 189 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 HMGN2P05204 90 aaKnown RBP8.12□□□□□ -1.11
TDP1-203ENST00000393454 RPLP0P05388 317 aaKnown RBP8.12□□□□□ -1.11
TDP1-203ENST00000393454 FABP3P05413 133 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 NR2F1P10589 423 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 UQCRBP14927 111 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 PNLIPP16233 465 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 ZNF26P17031 533 aaPredicted RBP8.12□□□□□ -1.11
TDP1-203ENST00000393454 CCL7P80098 99 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 EEF1A2Q05639 463 aaKnown RBP8.12□□□□□ -1.11
TDP1-203ENST00000393454 SLC13A2Q13183 592 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 FAM53BQ14153 422 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 ERV3-1Q14264 604 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 SYT16Q17RD7 645 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 FAM214AQ32MH5 1076 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.12□□□□□ -1.11
TDP1-203ENST00000393454 TMEM71Q6P5X7 295 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 SLC23A3Q6PIS1 610 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 TTLL10Q6ZVT0 673 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 PATL1Q86TB9 770 aaKnown RBP8.12□□□□□ -1.11
TDP1-203ENST00000393454 GPR135Q8IZ08 494 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 D2HGDHQ8N465 521 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 SPPL2AQ8TCT8 520 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 LZICQ8WZA0 190 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 TMBIM1Q969X1 311 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 C16orf58Q96GQ5 468 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 TMEM19Q96HH6 336 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 DOHHQ9BU89 302 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 ARRDC1-AS1Q9H2J1 176 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 SERHL2Q9H4I8 314 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 PRDM9Q9NQV7 894 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 CUTCQ9NTM9 273 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 DDX18Q9NVP1 670 aaKnown RBP8.12□□□□□ -1.11
TDP1-203ENST00000393454 THUMPD1Q9NXG2 353 aaKnown RBP8.12□□□□□ -1.11
TDP1-203ENST00000393454 P2RX2Q9UBL9 471 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 CNOT11Q9UKZ1 510 aaKnown RBP8.12□□□□□ -1.11
TDP1-203ENST00000393454 MRPS33Q9Y291 106 aaKnown RBP8.12□□□□□ -1.11
TDP1-203ENST00000393454 MAU2Q9Y6X3 613 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 LY6G6EA0A0G2JKS1 128 aa8.11□□□□□ -1.11
TDP1-203ENST00000393454 OR10H2O60403 315 aa8.11□□□□□ -1.11
TDP1-203ENST00000393454 NME6O75414 186 aaPredicted RBP8.11□□□□□ -1.11
TDP1-203ENST00000393454 E2F6O75461 281 aa8.11□□□□□ -1.11
TDP1-203ENST00000393454 TFPTP0C1Z6 253 aa8.11□□□□□ -1.11
TDP1-203ENST00000393454 FOLR1P15328 257 aa8.11□□□□□ -1.11
TDP1-203ENST00000393454 NELFEP18615 380 aaKnown RBP8.11□□□□□ -1.11
TDP1-203ENST00000393454 PPP2R1BP30154 601 aa8.11□□□□□ -1.11
TDP1-203ENST00000393454 HSPA13P48723 471 aa8.11□□□□□ -1.11
TDP1-203ENST00000393454 SELENOWP63302 87 aa8.11□□□□□ -1.11
TDP1-203ENST00000393454 STX4Q12846 297 aa8.11□□□□□ -1.11
TDP1-203ENST00000393454 SYPL1Q16563 259 aa8.11□□□□□ -1.11
TDP1-203ENST00000393454 CMPK2Q5EBM0 449 aa8.11□□□□□ -1.11
TDP1-203ENST00000393454 OTUD3Q5T2D3 398 aaPredicted RBP8.11□□□□□ -1.11
TDP1-203ENST00000393454 PPP4R4Q6NUP7 873 aa8.11□□□□□ -1.11
TDP1-203ENST00000393454 FAM111BQ6SJ93 734 aa8.11□□□□□ -1.11
TDP1-203ENST00000393454 CCDC80Q76M96 950 aa8.11□□□□□ -1.11
TDP1-203ENST00000393454 PRSS42Q7Z5A4 293 aa8.11□□□□□ -1.11
TDP1-203ENST00000393454 EPHX4Q8IUS5 362 aa8.11□□□□□ -1.11
TDP1-203ENST00000393454 FAM181AQ8N9Y4 354 aa8.11□□□□□ -1.11
TDP1-203ENST00000393454 SMYD1Q8NB12 490 aa8.11□□□□□ -1.11
TDP1-203ENST00000393454 OR7G2Q8NG99 324 aa8.11□□□□□ -1.11
TDP1-203ENST00000393454 OR1L3Q8NH93 324 aa8.11□□□□□ -1.11
TDP1-203ENST00000393454 NAT6Q93015 286 aa8.11□□□□□ -1.11
TDP1-203ENST00000393454 TAMM41Q96BW9 452 aa8.11□□□□□ -1.11
TDP1-203ENST00000393454 SDCCAG3Q96C92 435 aa8.11□□□□□ -1.11
TDP1-203ENST00000393454 BTBD9Q96Q07 612 aa8.11□□□□□ -1.11
TDP1-203ENST00000393454 Q9H521 79 aa8.11□□□□□ -1.11
TDP1-203ENST00000393454 NTN4Q9HB63 628 aa8.11□□□□□ -1.11
TDP1-203ENST00000393454 FANCEQ9HB96 536 aa8.11□□□□□ -1.11
TDP1-203ENST00000393454 IL1RAPQ9NPH3 570 aa8.11□□□□□ -1.11
TDP1-203ENST00000393454 SERTAD3Q9UJW9 196 aa8.11□□□□□ -1.11
TDP1-203ENST00000393454 U3KQA8 63 aa8.11□□□□□ -1.11
TDP1-203ENST00000393454 MUC3AQ02505 3323 aa8.11□□□□□ -1.11
TDP1-203ENST00000393454 EME2A4GXA9 379 aaPredicted RBP8.1□□□□□ -1.11
TDP1-203ENST00000393454 FITM1A5D6W6 292 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 G3V2T6 193 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 UPK1AO00322 258 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 CLDN4O14493 209 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 PCDHGA12O60330 932 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 DIRAS1O95057 198 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 CPNE6O95741 557 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 MPLP40238 635 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 CLCN2P51788 898 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 CRYBA2P53672 197 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 IST1P53990 364 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 ITGA1P56199 1179 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms