RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 RCHY1Q96PM5 261 aa4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 SYT11Q9BT88 431 aa4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 PARLQ9H300 379 aa4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 ROPN1Q9HAT0 212 aaPredicted RBP4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 THYN1Q9P016 225 aa4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 LHX3Q9UBR4 397 aa4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 TUBGCP4Q9UGJ1 667 aa4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 IL20RAQ9UHF4 553 aa4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 NIP7Q9Y221 180 aaKnown RBP eCLIP4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 ZNF175Q9Y473 711 aa4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 KIF3AQ9Y496 699 aa4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 TRGV8A0A0C4DH27 118 aa4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 BCLAF3A2AJT9 711 aaKnown RBP4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 RGSL1A5PLK6 1076 aa4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 LGALS8O00214 317 aa4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 SCGB2A1O75556 95 aa4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 PTBP3O95758 552 aaKnown RBP4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 DPEP1P16444 411 aa4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 ZNF10P21506 573 aaPredicted RBP4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 TKTL1P51854 596 aa4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 ERVK11-1P61568 191 aa4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 SPP2Q13103 211 aa4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 CEBPEQ15744 281 aa4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 HKDC1Q2TB90 917 aa4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 TCHHL1Q5QJ38 904 aaPredicted RBP4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 CEP85LQ5SZL2 805 aa4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 GOLGA7Q7Z5G4 137 aa4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 GPR142Q7Z601 462 aa4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 ADGRD2Q7Z7M1 963 aa4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 VPS36Q86VN1 386 aa4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 GPBP1Q86WP2 473 aa4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 FAM131BQ86XD5 332 aa4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 Q8NBF4 154 aa4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 RELL2Q8NC24 303 aaPredicted RBP4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 RSPH1Q8WYR4 309 aa4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 NR4A3Q92570 626 aa4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 GTF3AQ92664 365 aaKnown RBP4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 C11orf52Q96A22 123 aa4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 PRICKLE1Q96MT3 831 aaPredicted RBP4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 ACCSQ96QU6 501 aa4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 NDUFAF3Q9BU61 184 aa4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 ELL3Q9HB65 397 aaPredicted RBP4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 ANKMY1Q9P2S6 941 aa4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 MIOXQ9UGB7 285 aa4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 MUTYHQ9UIF7 546 aa4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 ATG4BQ9Y4P1 393 aa4.51□□□□□ -1.69
RNU6-40P-201ENST00000384254 FAM205AQ6ZU69 1335 aa4.5□□□□□ -1.69
RNU6-40P-201ENST00000384254 MEX3AA1L020 520 aaKnown RBP4.5□□□□□ -1.69
RNU6-40P-201ENST00000384254 ZNF724A8MTY0 619 aa4.5□□□□□ -1.69
RNU6-40P-201ENST00000384254 NTN3O00634 580 aaPredicted RBP4.5□□□□□ -1.69
RNU6-40P-201ENST00000384254 DCXO43602 365 aa4.5□□□□□ -1.69
RNU6-40P-201ENST00000384254 POP4O95707 220 aaKnown RBP4.5□□□□□ -1.69
RNU6-40P-201ENST00000384254 PRDX2P32119 198 aa4.5□□□□□ -1.69
RNU6-40P-201ENST00000384254 HPDP32754 393 aaPredicted RBP4.5□□□□□ -1.69
RNU6-40P-201ENST00000384254 NOP14P78316 857 aaKnown RBP4.5□□□□□ -1.69
RNU6-40P-201ENST00000384254 PRKCEQ02156 737 aa4.5□□□□□ -1.69
RNU6-40P-201ENST00000384254 SCGB2A2Q13296 93 aa4.5□□□□□ -1.69
RNU6-40P-201ENST00000384254 ZC2HC1BQ5TFG8 222 aa4.5□□□□□ -1.69
RNU6-40P-201ENST00000384254 ZCCHC12Q6PEW1 402 aa4.5□□□□□ -1.69
RNU6-40P-201ENST00000384254 ARSKQ6UWY0 536 aa4.5□□□□□ -1.69
RNU6-40P-201ENST00000384254 DPY19L2P2Q6ZN68 376 aa4.5□□□□□ -1.69
RNU6-40P-201ENST00000384254 RANBP3LQ86VV4 465 aaPredicted RBP4.5□□□□□ -1.69
RNU6-40P-201ENST00000384254 TEX9Q8N6V9 391 aa4.5□□□□□ -1.69
RNU6-40P-201ENST00000384254 SAMD12Q8N8I0 201 aa4.5□□□□□ -1.69
RNU6-40P-201ENST00000384254 CHDHQ8NE62 594 aaPredicted RBP4.5□□□□□ -1.69
RNU6-40P-201ENST00000384254 LRRC15Q8TF66 581 aa4.5□□□□□ -1.69
RNU6-40P-201ENST00000384254 P3H4Q92791 437 aa4.5□□□□□ -1.69
RNU6-40P-201ENST00000384254 PINX1Q96BK5 328 aaKnown RBP4.5□□□□□ -1.69
RNU6-40P-201ENST00000384254 NAF1Q96HR8 494 aaKnown RBP4.5□□□□□ -1.69
RNU6-40P-201ENST00000384254 TSPAN18Q96SJ8 248 aa4.5□□□□□ -1.69
RNU6-40P-201ENST00000384254 ATF6BQ99941 703 aa4.5□□□□□ -1.69
RNU6-40P-201ENST00000384254 KRTAP1-5Q9BYS1 174 aa4.5□□□□□ -1.69
RNU6-40P-201ENST00000384254 NLNQ9BYT8 704 aa4.5□□□□□ -1.69
RNU6-40P-201ENST00000384254 NT5DC2Q9H857 520 aa4.5□□□□□ -1.69
RNU6-40P-201ENST00000384254 VAT1LQ9HCJ6 419 aa4.5□□□□□ -1.69
RNU6-40P-201ENST00000384254 EPS15L1Q9UBC2 864 aa4.5□□□□□ -1.69
RNU6-40P-201ENST00000384254 SEC14L4Q9UDX3 406 aa4.5□□□□□ -1.69
RNU6-40P-201ENST00000384254 MGAT4BQ9UQ53 548 aa4.5□□□□□ -1.69
RNU6-40P-201ENST00000384254 FKBP7Q9Y680 259 aa4.5□□□□□ -1.69
RNU6-40P-201ENST00000384254 IGLV4-3A0A075B6K6 122 aa4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 FAM230AA0A1W2PPH8 454 aa4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 RNF212BA8MTL3 300 aa4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 ARHGEF33A8MVX0 844 aa4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 A8MXK9 166 aa4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 NOL3O60936 208 aaKnown RBP4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 OR9G9P0C7N8 305 aa4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 RRASP10301 218 aa4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 SELEP16581 610 aa4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 PPP2R1BP30154 601 aa4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 SLC7A2P52569 658 aa4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 NDUFV3P56181 108 aaKnown RBP4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 HERVK_113P63132 956 aa4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 ERVK-8P63133 956 aa4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 HYAL1Q12794 435 aa4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 NFATC2Q13469 925 aa4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 ENPP2Q13822 863 aa4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 ZNF613Q6PF04 617 aa4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 NUFIP2Q7Z417 695 aaKnown RBP4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 P4HA3Q7Z4N8 544 aa4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 LUZP1Q86V48 1076 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms