RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 RBM45Q8IUH3 476 aaKnown RBP13.15□□□□□ -0.3
SDC1-202ENST00000381150 FIBINQ8TAL6 211 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 TM9SF4Q92544 642 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 AP3S1Q92572 193 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 MRPS31Q92665 395 aaKnown RBP13.15□□□□□ -0.3
SDC1-202ENST00000381150 TESCQ96BS2 214 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 PIP5K1AQ99755 562 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 KATNB1Q9BVA0 655 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 SAP130Q9H0E3 1048 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.15□□□□□ -0.31e-6■■□□□ 13.5
SDC1-202ENST00000381150 DIABLOQ9NR28 239 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 MRPL17Q9NRX2 175 aaKnown RBP13.15□□□□□ -0.3
SDC1-202ENST00000381150 EXTL2Q9UBQ6 330 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 PLEKHB1Q9UF11 243 aaPredicted RBP13.15□□□□□ -0.3
SDC1-202ENST00000381150 CLCA2Q9UQC9 943 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 PRAMEF25A6NGN4 478 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 PAHP00439 452 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 URODP06132 367 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 MSL3P1P0C860 447 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 ETV5P41161 510 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 ALDH9A1P49189 494 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 ETV1P50549 477 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 WNT3P56703 355 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 NAE1Q13564 534 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 OLIG3Q7RTU3 272 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 TSPAN33Q86UF1 283 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 CBARPQ8N350 705 aaPredicted RBP13.15□□□□□ -0.3
SDC1-202ENST00000381150 SYNPOQ8N3V7 929 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 ZFP3Q96NJ6 502 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 LYSMD1Q96S90 227 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 DCLRE1CQ96SD1 692 aaKnown RBP13.15□□□□□ -0.3
SDC1-202ENST00000381150 SLC28A3Q9HAS3 691 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 ACER3Q9NUN7 267 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 SPG21Q9NZD8 308 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 RPL36Q9Y3U8 105 aaKnown RBP13.15□□□□□ -0.3
SDC1-202ENST00000381150 DOCK6Q96HP0 2047 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 EEF1E1O43324 174 aaKnown RBP13.15□□□□□ -0.3
SDC1-202ENST00000381150 SOCS5O75159 536 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 GABRB1P18505 474 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 GABRR2P28476 465 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 PBLDP30039 288 aaPredicted RBP13.15□□□□□ -0.3
SDC1-202ENST00000381150 UNC5DQ6UXZ4 953 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 MACC1Q6ZN28 852 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 RFLNAQ6ZTI6 216 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 SLC51BQ86UW2 128 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 DNAJA4Q8WW22 397 aaPredicted RBP13.15□□□□□ -0.3
SDC1-202ENST00000381150 ST8SIA2Q92186 375 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 C11orf24Q96F05 449 aaPredicted RBP13.15□□□□□ -0.3
SDC1-202ENST00000381150 MAPKAP1Q9BPZ7 522 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 NIPAL2Q9H841 368 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 IL20RAQ9UHF4 553 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 MAFFQ9ULX9 164 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 SCML1Q9UN30 329 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 ARID1BQ8NFD5 2236 aaPredicted RBP13.15□□□□□ -0.3
SDC1-202ENST00000381150 M6PRP20645 277 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 LHCGRP22888 699 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 HLA-DMAP28067 261 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 SOX18P35713 384 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 AKR1D1P51857 326 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 MEF2AQ02078 507 aaPredicted RBP13.14□□□□□ -0.31
SDC1-202ENST00000381150 VEZF1Q14119 521 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 TEAD4Q15561 434 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 GPR68Q15743 365 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 DCST1Q5T197 706 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 C2orf73Q8N5S3 287 aaPredicted RBP13.14□□□□□ -0.31
SDC1-202ENST00000381150 GPR26Q8NDV2 337 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 TBX5Q99593 518 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 C1QTNF7Q9BXJ2 289 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 RBCK1Q9BYM8 510 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 DNAJC11Q9NVH1 559 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 NUP50Q9UKX7 468 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 PADI2Q9Y2J8 665 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 KNL1Q8NG31 2342 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 MYOFQ9NZM1 2061 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 A0A0A6YYJ9 748 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 NPIPB15A6NHN6 443 aaPredicted RBP13.14□□□□□ -0.31
SDC1-202ENST00000381150 OR2AG2A6NM03 316 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 AKAP8O43823 692 aaKnown RBP13.14□□□□□ -0.31
SDC1-202ENST00000381150 GCM2O75603 506 aaPredicted RBP13.14□□□□□ -0.31
SDC1-202ENST00000381150 TGFB1P01137 390 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 DRD5P21918 477 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 CTSOP43234 321 aaPredicted RBP13.14□□□□□ -0.31
SDC1-202ENST00000381150 DOC2AQ14183 400 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 TEX261Q6UWH6 196 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 CFAP77Q6ZQR2 320 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 VRK3Q8IV63 474 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 PIAS4Q8N2W9 510 aaPredicted RBP13.14□□□□□ -0.31
SDC1-202ENST00000381150 ESX1Q8N693 406 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 P2RY13Q9BPV8 354 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 B3GNT2Q9NY97 397 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 CFAP97Q9P2B7 532 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 PPIL1Q9Y3C6 166 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 U3KQ87 197 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 E7EQ34 232 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 TGM5O43548 720 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 PRAMEF4O60810 478 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 BCHEP06276 602 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 VEGFBP49765 207 aa13.14□□□□□ -0.31
SDC1-202ENST00000381150 LSM11P83369 360 aaKnown RBP eCLIP13.14□□□□□ -0.31
SDC1-202ENST00000381150 MLLT1Q03111 559 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms