RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 ADAM19Q9H013 955 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 TLX2O43763 284 aaPredicted RBP4.71□□□□□ -1.66
PCDH9-201ENST00000377861 ATAT1Q5SQI0 421 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 GPR155Q7Z3F1 870 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 DTWD1Q8N5C7 304 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 C11orf24Q96F05 449 aaPredicted RBP4.71□□□□□ -1.66
PCDH9-201ENST00000377861 ZNF486Q96H40 463 aaPredicted RBP4.71□□□□□ -1.66
PCDH9-201ENST00000377861 ACTRT3Q9BYD9 372 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 LINC01387J3KSC0 135 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 DHPSP49366 369 aaPredicted RBP4.71□□□□□ -1.66
PCDH9-201ENST00000377861 GPR85P60893 370 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 DPY19L3Q6ZPD9 716 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 GPR135Q8IZ08 494 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 MVB12AQ96EY5 273 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 TBL1XO60907 577 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 MAP2K3P46734 347 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 AVPR1BP47901 424 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 RAB28P51157 221 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 EXT2Q93063 718 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 NUDT15Q9NV35 164 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 VAMP5O95183 116 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 RPL4P36578 427 aaKnown RBP4.71□□□□□ -1.66
PCDH9-201ENST00000377861 CD96P40200 585 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 SAPCD2Q86UD0 394 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 GLYATL1Q969I3 302 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 RNF32Q9H0A6 362 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 MTG2Q9H4K7 406 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 PCDHGA8Q9Y5G5 932 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 CTDSPLO15194 276 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 EVX1P49640 407 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 SHROOM1Q2M3G4 852 aaPredicted RBP4.71□□□□□ -1.66
PCDH9-201ENST00000377861 SAMD7Q7Z3H4 446 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 DAZLQ92904 295 aaKnown RBP4.71□□□□□ -1.66
PCDH9-201ENST00000377861 C10orf90Q96M02 699 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 GRHPRQ9UBQ7 328 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 PCDHB14Q9Y5E9 798 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 SNAP29O95721 258 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 MMP15P51511 669 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 UFM1P61960 85 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 SF1Q15637 639 aaKnown RBP4.71□□□□□ -1.66
PCDH9-201ENST00000377861 ENTPD8Q5MY95 495 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 SLC46A3Q7Z3Q1 461 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 GOLGA7Q7Z5G4 137 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 IRF7Q92985 503 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 SHISA4Q96DD7 197 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 SMOQ99835 787 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 LYRM4Q9HD34 91 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 TCRBV7S3A2A0A539 114 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 RGS8P57771 180 aaPredicted RBP4.71□□□□□ -1.66
PCDH9-201ENST00000377861 YIF1BQ5BJH7 314 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 TMEM244Q5VVB8 128 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 SLC22A16Q86VW1 577 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 NAXDQ8IW45 347 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 CNOT6Q9ULM6 557 aaKnown RBP4.71□□□□□ -1.66
PCDH9-201ENST00000377861 GXYLT2A0PJZ3 443 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 ATP6V1G2-DDX39BF2Z307 99 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 EDIL3O43854 480 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 PON2Q15165 354 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 MINDY4Q4G0A6 757 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 SLC51BQ86UW2 128 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 TECTBQ96PL2 329 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 ATXN3LQ9H3M9 355 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 A0A087WV62 115 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 NCR1O76036 304 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 ATE1O95260 518 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 F10P00742 488 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 TNFSF9P41273 254 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 DENND1CQ8IV53 801 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 LAS2Q8IYD9 372 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 EDAQ92838 391 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 STACQ99469 402 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 MAP4K5Q9Y4K4 846 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 A0A1W2PQH9 124 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 OR6C74A6NCV1 312 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 TO15178 435 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 RENP00797 406 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 ARRDC2Q8TBH0 407 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 CYSLTR2Q9NS75 346 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 TRPC4Q9UBN4 977 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 SMPD1P17405 629 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 OR1D2P34982 312 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 FBXO16Q8IX29 292 aaPredicted RBP4.71□□□□□ -1.66
PCDH9-201ENST00000377861 CDK15Q96Q40 435 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 HDAC8Q9BY41 377 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 EMCNQ9ULC0 261 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 GALK1P51570 392 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 PIWIL1Q96J94 861 aaKnown RBP4.7□□□□□ -1.66
PCDH9-201ENST00000377861 ACP6Q9NPH0 428 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 SERTAD3Q9UJW9 196 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 ANTXRLA6NF34 631 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 GJE1A6NN92 205 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 CPN1P15169 458 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 HTR1FP30939 366 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 TAF8Q7Z7C8 310 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 NMUR1Q9HB89 426 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 SEMA4GQ9NTN9 838 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 SLC17A6Q9P2U8 582 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 OMPP47874 163 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 C19orf57Q0VDD7 668 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 HMGCLL1Q8TB92 370 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms