RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 IFNA21P01568 189 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 SLC26A5P58743 744 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 RING1Q06587 406 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 EEF1A1P5Q5VTE0 462 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 PAMR1Q6UXH9 720 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 AVL9Q8NBF6 648 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 ATOH1Q92858 354 aaPredicted RBP16.36■□□□□ 0.21
MCF2L-203ENST00000375604 PGAM5Q96HS1 289 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 DPAGT1Q9H3H5 408 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 MVB12BQ9H7P6 319 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 PCDH10Q9P2E7 1040 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 DHDHQ9UQ10 334 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 PRSS21Q9Y6M0 314 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 TP53I11O14683 189 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 FOXA1P55317 472 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 XKRXQ6PP77 449 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 PITX2Q99697 317 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 REV1Q9UBZ9 1251 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 MGAT4BQ9UQ53 548 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 IFT52Q9Y366 437 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 C1orf226A1L170 272 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 TNFSF12O43508 249 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 FNTBP49356 437 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 SCD5Q86SK9 330 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 TRMT10AQ8TBZ6 339 aaKnown RBP16.36■□□□□ 0.21
MCF2L-203ENST00000375604 HERPUD2Q9BSE4 406 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 FN3KQ9H479 309 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 METTL21EPA6NDL7 271 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 M0R036 132 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 EEF1E1O43324 174 aaKnown RBP16.36■□□□□ 0.21
MCF2L-203ENST00000375604 ZNF84P51523 738 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 ZBED5Q49AG3 693 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 GTDC1Q4AE62 458 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 UBE2UQ5VVX9 321 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 RAB12Q6IQ22 244 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 LAS2Q8IYD9 372 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 VDAC3Q9Y277 283 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 PCDHGA2Q9Y5H1 932 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 ATF4P18848 351 aaPredicted RBP16.36■□□□□ 0.21
MCF2L-203ENST00000375604 PSMA6P60900 246 aaKnown RBP16.36■□□□□ 0.21
MCF2L-203ENST00000375604 GBX1Q14549 363 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 KANK2Q63ZY3 851 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 CCDC107Q8WV48 283 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 ASB15Q8WXK1 588 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 R3HDMLQ9H3Y0 253 aa16.36■□□□□ 0.21
MCF2L-203ENST00000375604 MYH7P12883 1935 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 PSMB5P28074 263 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 POU3F4P49335 361 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 APOFQ13790 326 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 OR5M10Q6IEU7 315 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 SECISBP2Q96T21 854 aaKnown RBP16.35■□□□□ 0.21
MCF2L-203ENST00000375604 ZNF334Q9HCZ1 680 aaPredicted RBP16.35■□□□□ 0.21
MCF2L-203ENST00000375604 CLEC4EQ9ULY5 219 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 A0A1B0GV50 99 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 M0R129 80 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 OXTRP30559 389 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 SEC23BQ15437 767 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 PTERQ96BW5 349 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 IGSF5Q9NSI5 407 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 MED11Q9P086 117 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 MYH1P12882 1939 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 VSTM5A8MXK1 200 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 MAN2B1O00754 1011 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 FRS3O43559 492 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 LAMP1P11279 417 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 GTF2F2P13984 249 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 RPS15P62841 145 aaKnown RBP16.35■□□□□ 0.21
MCF2L-203ENST00000375604 SWT1Q5T5J6 900 aaKnown RBP16.35■□□□□ 0.21
MCF2L-203ENST00000375604 NDUFAF5Q5TEU4 345 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 OR2T33Q8NG76 320 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 TOE1Q96GM8 510 aaKnown RBP16.35■□□□□ 0.21
MCF2L-203ENST00000375604 CDC14CA4D256 554 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 MITFO75030 526 aaPredicted RBP16.35■□□□□ 0.21
MCF2L-203ENST00000375604 ARSFP54793 590 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 CDKN3Q16667 212 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 SLC25A25Q6KCM7 469 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 TMPPEQ6ZT21 453 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 ZC3H3Q8IXZ2 948 aaKnown RBP16.35■□□□□ 0.21
MCF2L-203ENST00000375604 TMEM151AQ8N4L1 468 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 FIBINQ8TAL6 211 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 CD320Q9NPF0 282 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 ABCD2Q9UBJ2 740 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 MYH6P13533 1939 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 ABLIM1O14639 778 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 EIF2S3P41091 472 aaKnown RBP16.35■□□□□ 0.21
MCF2L-203ENST00000375604 DLX2Q07687 328 aaPredicted RBP16.35■□□□□ 0.21
MCF2L-203ENST00000375604 CHRFAM7AQ494W8 412 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 TMEFF1Q8IYR6 380 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 PTTG2Q9NZH5 202 aa16.35■□□□□ 0.21
MCF2L-203ENST00000375604 PPP1R3DO95685 299 aa16.34■□□□□ 0.21
MCF2L-203ENST00000375604 EN2P19622 333 aaPredicted RBP16.34■□□□□ 0.21
MCF2L-203ENST00000375604 PHC1P78364 1004 aa16.34■□□□□ 0.21
MCF2L-203ENST00000375604 AAK1Q2M2I8 961 aa16.34■□□□□ 0.21
MCF2L-203ENST00000375604 BTBD16Q32M84 506 aa16.34■□□□□ 0.21
MCF2L-203ENST00000375604 NETO1Q8TDF5 533 aa16.34■□□□□ 0.21
MCF2L-203ENST00000375604 FUBP1Q96AE4 644 aaKnown RBP16.34■□□□□ 0.21
MCF2L-203ENST00000375604 C9orf43Q8TAL5 461 aaPredicted RBP16.34■□□□□ 0.21
MCF2L-203ENST00000375604 DAZLQ92904 295 aaKnown RBP16.34■□□□□ 0.21
MCF2L-203ENST00000375604 RNF38Q9H0F5 515 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms