RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 CPZQ66K79 652 aa6.24□□□□□ -1.41
SMC1A-202ENST00000375340 OR4C11Q6IEV9 310 aa6.24□□□□□ -1.41
SMC1A-202ENST00000375340 OR2L5Q8NG80 312 aa6.24□□□□□ -1.41
SMC1A-202ENST00000375340 HMGB4Q8WW32 186 aa6.24□□□□□ -1.41
SMC1A-202ENST00000375340 CAMK1GQ96NX5 476 aa6.24□□□□□ -1.41
SMC1A-202ENST00000375340 SLC12A9Q9BXP2 914 aa6.24□□□□□ -1.41
SMC1A-202ENST00000375340 NANSQ9NR45 359 aa6.24□□□□□ -1.41
SMC1A-202ENST00000375340 IFT52Q9Y366 437 aa6.24□□□□□ -1.41
SMC1A-202ENST00000375340 ELOA3DA6NLF2 546 aaPredicted RBP6.24□□□□□ -1.41
SMC1A-202ENST00000375340 ADPRMQ3LIE5 342 aa6.24□□□□□ -1.41
SMC1A-202ENST00000375340 ELOA3BQ3SY89 546 aa6.24□□□□□ -1.41
SMC1A-202ENST00000375340 PRRT3Q5FWE3 981 aa6.24□□□□□ -1.41
SMC1A-202ENST00000375340 PIAS4Q8N2W9 510 aaPredicted RBP6.24□□□□□ -1.41
SMC1A-202ENST00000375340 NUP43Q8NFH3 380 aa6.24□□□□□ -1.41
SMC1A-202ENST00000375340 ELOA3Q8NG57 546 aa6.24□□□□□ -1.41
SMC1A-202ENST00000375340 CCDC32Q9BV29 185 aa6.24□□□□□ -1.41
SMC1A-202ENST00000375340 B4DGG1 531 aa6.24□□□□□ -1.41
SMC1A-202ENST00000375340 CA12O43570 354 aa6.24□□□□□ -1.41
SMC1A-202ENST00000375340 C1SP09871 688 aa6.24□□□□□ -1.41
SMC1A-202ENST00000375340 HK3P52790 923 aa6.24□□□□□ -1.41
SMC1A-202ENST00000375340 TRAM2Q15035 370 aa6.24□□□□□ -1.41
SMC1A-202ENST00000375340 DEFB115Q30KQ5 88 aa6.24□□□□□ -1.41
SMC1A-202ENST00000375340 SERPINA11Q86U17 422 aa6.24□□□□□ -1.41
SMC1A-202ENST00000375340 PHC2Q8IXK0 858 aa6.24□□□□□ -1.41
SMC1A-202ENST00000375340 SLAIN1Q8ND83 568 aa6.24□□□□□ -1.41
SMC1A-202ENST00000375340 OR5AR1Q8NGP9 310 aa6.24□□□□□ -1.41
SMC1A-202ENST00000375340 MCHR1Q99705 422 aa6.24□□□□□ -1.41
SMC1A-202ENST00000375340 TLR9Q9NR96 1032 aa6.24□□□□□ -1.41
SMC1A-202ENST00000375340 HCFC1R1Q9NWW0 138 aa6.24□□□□□ -1.41
SMC1A-202ENST00000375340 NLKQ9UBE8 527 aa6.24□□□□□ -1.41
SMC1A-202ENST00000375340 GIMD1P0DJR0 217 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 PDHA2P29803 388 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 LCN1P31025 176 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 ST3GAL3Q11203 375 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 GRIK2Q13002 908 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 PLBD1Q6P4A8 553 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 DCUN1D3Q8IWE4 304 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 PPP1R14AQ96A00 147 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 KXD1Q9BQD3 176 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 RANGRFQ9HD47 186 aaPredicted RBP6.23□□□□□ -1.41
SMC1A-202ENST00000375340 C12orf4Q9NQ89 552 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 HCN2Q9UL51 889 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 PCDHGA3Q9Y5H0 932 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 SRCP12931 536 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 CERS1P27544 350 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 PSMB5P28074 263 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 STEAP3Q658P3 488 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 OR8K5Q8NH50 307 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 RNASE11Q8TAA1 199 aaKnown RBP6.23□□□□□ -1.41
SMC1A-202ENST00000375340 CD180Q99467 661 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 TDP1Q9NUW8 608 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 INMT-MINDY4F8WBC2 141 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 PTHP01270 115 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 GASTP01350 101 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 MT-ND5P03915 603 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 EIF1AXP47813 144 aaKnown RBP6.23□□□□□ -1.41
SMC1A-202ENST00000375340 PIN1Q13526 163 aaPredicted RBP6.23□□□□□ -1.41
SMC1A-202ENST00000375340 BCL7AQ4VC05 210 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 SLC27A4Q6P1M0 643 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 LAX1Q8IWV1 398 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 OR52N2Q8NGI0 321 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 CHPT1Q8WUD6 406 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 OTUB2Q96DC9 234 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 OR10A4Q9H209 315 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 FBXL3Q9UKT7 428 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 IGLON5A6NGN9 336 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 WWP2O00308 870 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 ADAM12O43184 909 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 HMGN1P05114 100 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 GSTM4Q03013 218 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 KCNJ8Q15842 424 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 NNATQ16517 81 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 DUS1LQ6P1R4 473 aaKnown RBP6.23□□□□□ -1.41
SMC1A-202ENST00000375340 OR9A2Q8NGT5 310 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 ZNF583Q96ND8 569 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 ZNF717Q9BY31 904 aaPredicted RBP6.23□□□□□ -1.41
SMC1A-202ENST00000375340 MKKSQ9NPJ1 570 aaPredicted RBP6.23□□□□□ -1.41
SMC1A-202ENST00000375340 SLC7A7Q9UM01 511 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 MAGEA8P43361 318 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 SLC9A3P48764 834 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 PSMA6P60900 246 aaKnown RBP6.23□□□□□ -1.41
SMC1A-202ENST00000375340 RPS25P62851 125 aaKnown RBP6.23□□□□□ -1.41
SMC1A-202ENST00000375340 TMEM179BQ7Z7N9 219 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 METTL4Q8N3J2 472 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 OR5P2Q8WZ92 322 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 ECHDC3Q96DC8 303 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 ZSWIM3Q96MP5 696 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 GPER1Q99527 375 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 POLR2AP24928 1970 aaKnown RBP6.23□□□□□ -1.41
SMC1A-202ENST00000375340 LRRN3E7EW58 273 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 PROM1O43490 865 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 TGM5O43548 720 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 SPNP16150 400 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 TACR1P25103 407 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 HSD17B2P37059 387 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 GP2P55259 537 aaKnown RBP6.23□□□□□ -1.41
SMC1A-202ENST00000375340 VLDLRP98155 873 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 ENPP2Q13822 863 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 PLAG1Q6DJT9 500 aa6.23□□□□□ -1.41
SMC1A-202ENST00000375340 METTL2BQ6P1Q9 378 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms