RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 KCNAB2Q13303 367 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 LRFN4Q6PJG9 635 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 Q8N402 240 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 OR51A7Q8NH64 312 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 ZNF689Q96CS4 500 aaPredicted RBP11.04□□□□□ -0.64
VCL-202ENST00000372755 PBDC1Q9BVG4 233 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 MEPEQ9NQ76 525 aaPredicted RBP11.04□□□□□ -0.64
VCL-202ENST00000372755 PCDHGA6Q9Y5G7 932 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 CKMT1AP12532 417 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 PORP16435 677 aaPredicted RBP11.03□□□□□ -0.64
VCL-202ENST00000372755 GKP32189 559 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 RAB28P51157 221 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 DIO3P55073 304 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 LMAN2Q12907 356 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 NFE2L1Q14494 772 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 PTPRCAPQ14761 206 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 TMEM205Q6UW68 189 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 TMEM107Q6UX40 140 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 NPLOC4Q8TAT6 608 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 SGIP1Q9BQI5 828 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 FAM86C1Q9NVL1 165 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 STUB1Q9UNE7 303 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 TMEM131LA2VDJ0 1609 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 PROZP22891 400 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 CRYZQ08257 329 aaKnown RBP11.03□□□□□ -0.64
VCL-202ENST00000372755 TECRLQ5HYJ1 363 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 ATAD3CQ5T2N8 411 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 FAM205BPQ63HN1 556 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 OR4C11Q6IEV9 310 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 FAM43BQ6ZT52 329 aaPredicted RBP11.03□□□□□ -0.64
VCL-202ENST00000372755 IL22RA1Q8N6P7 574 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 IL17RCQ8NAC3 791 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 TGM7Q96PF1 710 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 ZNF649Q9BS31 505 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 MTG2Q9H4K7 406 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 SFXN1Q9H9B4 322 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 SRA1Q9HD15 236 aaKnown RBP11.03□□□□□ -0.64
VCL-202ENST00000372755 GABBR2O75899 941 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 BEST1O76090 585 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 LATS1O95835 1130 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 RAB11BQ15907 218 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 AAK1Q2M2I8 961 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 CCDC58Q4VC31 144 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 XKR5Q6UX68 686 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 UNC5DQ6UXZ4 953 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 C14orf80Q86SX3 495 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 KRTCAP2Q8N6L1 136 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 DDIT4LQ96D03 193 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 PEBP4Q96S96 227 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 HOXD1Q9GZZ0 328 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 CCM2LQ9NUG4 571 aaPredicted RBP11.03□□□□□ -0.64
VCL-202ENST00000372755 GPRC5BQ9NZH0 403 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 MAN2B1O00754 1011 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 ADRB3P13945 408 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 CDK2P24941 298 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 TBPL1P62380 186 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 DEFB134Q4QY38 66 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 C6orf141Q5SZD1 244 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 NXPE4Q6UWF7 544 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 NANOS1Q8WY41 292 aaKnown RBP11.03□□□□□ -0.64
VCL-202ENST00000372755 CCDC106Q9BWC9 280 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 MGAT4CQ9UBM8 478 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 HSPE1-MOB4S4R3N1 261 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 GGT3PA6NGU5 568 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 HCRTO43612 131 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 OR2B3O76000 313 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 CAPN3P20807 821 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 RORAP35398 523 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 MAP2K4P45985 399 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 RCAN2Q14206 197 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 SPRYD4Q8WW59 207 aaPredicted RBP11.03□□□□□ -0.64
VCL-202ENST00000372755 SCRN2Q96FV2 425 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 TSNAXQ99598 290 aaKnown RBP11.03□□□□□ -0.64
VCL-202ENST00000372755 PAK4O96013 591 aaPredicted RBP11.03□□□□□ -0.64
VCL-202ENST00000372755 PYCR1P32322 319 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 GABARAPL2P60520 117 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 PPA1Q15181 289 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 BCL2L15Q5TBC7 163 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 SLC18B1Q6NT16 456 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 GSG1LQ6UXU4 331 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 TTLL10Q6ZVT0 673 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 C6orf120Q7Z4R8 191 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 ELMOD2Q8IZ81 293 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 BEST3Q8N1M1 668 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 UMODL1-AS1Q8N2C9 162 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 GATAD2BQ8WXI9 593 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 NELL2Q99435 816 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 AIG1Q9NVV5 245 aa11.03□□□□□ -0.64
VCL-202ENST00000372755 PAK1IP1Q9NWT1 392 aaPredicted RBP11.03□□□□□ -0.64
VCL-202ENST00000372755 A0A1W2PP55 124 aa11.02□□□□□ -0.64
VCL-202ENST00000372755 GJE1A6NN92 205 aa11.02□□□□□ -0.64
VCL-202ENST00000372755 RHOP08100 348 aa11.02□□□□□ -0.64
VCL-202ENST00000372755 RAC2P15153 192 aa11.02□□□□□ -0.64
VCL-202ENST00000372755 MAGEA3P43357 314 aa11.02□□□□□ -0.64
VCL-202ENST00000372755 ART1P52961 327 aa11.02□□□□□ -0.64
VCL-202ENST00000372755 UBE2NP61088 152 aaKnown RBP11.02□□□□□ -0.64
VCL-202ENST00000372755 RSU1Q15404 277 aa11.02□□□□□ -0.64
VCL-202ENST00000372755 PPP1R3AQ16821 1122 aa11.02□□□□□ -0.64
VCL-202ENST00000372755 GARNL3Q5VVW2 1013 aa11.02□□□□□ -0.64
VCL-202ENST00000372755 GLIS1Q8NBF1 620 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms