RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 SNTB2Q13425 540 aaKnown RBP13.48□□□□□ -0.25
RAPGEF1-202ENST00000372190 TRAM1Q15629 374 aa13.48□□□□□ -0.25
RAPGEF1-202ENST00000372190 RTP2Q5QGT7 225 aa13.48□□□□□ -0.25
RAPGEF1-202ENST00000372190 RBM18Q96H35 190 aaKnown RBP13.48□□□□□ -0.25
RAPGEF1-202ENST00000372190 DTLQ9NZJ0 730 aa13.48□□□□□ -0.25
RAPGEF1-202ENST00000372190 TTC24A2A3L6 582 aaPredicted RBP13.48□□□□□ -0.25
RAPGEF1-202ENST00000372190 ZNF670-ZNF695F2Z2N8 137 aa13.48□□□□□ -0.25
RAPGEF1-202ENST00000372190 HLA-DQB2P05538 268 aa13.48□□□□□ -0.25
RAPGEF1-202ENST00000372190 CREB1P16220 341 aa13.48□□□□□ -0.25
RAPGEF1-202ENST00000372190 ZNF30P17039 623 aa13.48□□□□□ -0.25
RAPGEF1-202ENST00000372190 CASP9P55211 416 aa13.48□□□□□ -0.25
RAPGEF1-202ENST00000372190 CHRFAM7AQ494W8 412 aa13.48□□□□□ -0.25
RAPGEF1-202ENST00000372190 SLC15A3Q8IY34 581 aa13.48□□□□□ -0.25
RAPGEF1-202ENST00000372190 DCAF4L2Q8NA75 395 aa13.48□□□□□ -0.25
RAPGEF1-202ENST00000372190 ZNF596Q8TC21 504 aa13.48□□□□□ -0.25
RAPGEF1-202ENST00000372190 CRB3Q9BUF7 120 aa13.48□□□□□ -0.25
RAPGEF1-202ENST00000372190 AGAP14A8MT82 685 aa13.48□□□□□ -0.25
RAPGEF1-202ENST00000372190 EEF1E1-BLOC1S5C9J1V9 151 aa13.48□□□□□ -0.25
RAPGEF1-202ENST00000372190 PRKYO43930 277 aa13.48□□□□□ -0.25
RAPGEF1-202ENST00000372190 GJB5O95377 273 aa13.48□□□□□ -0.25
RAPGEF1-202ENST00000372190 OXTRP30559 389 aa13.48□□□□□ -0.25
RAPGEF1-202ENST00000372190 OR2T35Q8NGX2 323 aa13.48□□□□□ -0.25
RAPGEF1-202ENST00000372190 HSD3B7Q9H2F3 369 aa13.48□□□□□ -0.25
RAPGEF1-202ENST00000372190 SERTAD4Q9NUC0 356 aa13.48□□□□□ -0.25
RAPGEF1-202ENST00000372190 CDC14AQ9UNH5 594 aa13.48□□□□□ -0.25
RAPGEF1-202ENST00000372190 EXOSC1Q9Y3B2 195 aaKnown RBP13.48□□□□□ -0.25
RAPGEF1-202ENST00000372190 GOSR2O14653 212 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 ARPC5O15511 151 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 DFFBO76075 338 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 RAB3DO95716 219 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 DEFB103AP81534 67 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 RUNX3Q13761 415 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 GPR68Q15743 365 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 PCK2Q16822 640 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 ZDHHC24Q6UX98 284 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 ZER1Q7Z7L7 766 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 SLC43A3Q8NBI5 491 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 FAM156AQ8NDB6 213 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 SMPDL3AQ92484 453 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 HLA-CQ95604 372 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 HS6ST2Q96MM7 605 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 SIX2Q9NPC8 291 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 ZDHHC18Q9NUE0 388 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 PKD1L3Q7Z443 1732 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 PIM1P11309 404 aaPredicted RBP13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 ZNF84P51523 738 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 ART1P52961 327 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 CRISP1P54107 249 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 RPS3AP61247 264 aaKnown RBP13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 GUK1Q16774 197 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 EIPR1Q53HC9 387 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 CRB2Q5IJ48 1285 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 TMEM126BQ8IUX1 230 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 GDPD1Q8N9F7 314 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 ACOT11Q8WXI4 607 aaPredicted RBP13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 FAM3CQ92520 227 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 GTF2H4Q92759 462 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 ZNF641Q96N77 438 aaPredicted RBP13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 TOX2Q96NM4 488 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 CAMK1GQ96NX5 476 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 GPR174Q9BXC1 333 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 SLC38A1Q9H2H9 487 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 F5H5P2 479 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 SCGB2A1O75556 95 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 HCAR3P49019 387 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 SMSP52788 366 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 ZNF33AQ06730 810 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 COQ5Q5HYK3 327 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 AZIN2Q96A70 460 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 CCM2Q9BSQ5 444 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 GATA5Q9BWX5 397 aaPredicted RBP13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 ZDHHC3Q9NYG2 299 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 J3KR12 359 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 UBBP0CG47 229 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 UBCP0CG48 685 aaKnown RBP13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 IL12BP29460 328 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 HSPA7P48741 367 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 GPR33Q49SQ1 333 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 C12orf40Q86WS4 652 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 PCDHAC1Q9H158 963 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 SIX4Q9UIU6 781 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 MAGEB17A8MXT2 336 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 CKMT2P17540 419 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 GTF2H2Q13888 395 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 ELOCQ15369 112 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 TBC1D25Q3MII6 688 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 GTF2H2CQ6P1K8 395 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 YIPF7Q8N8F6 280 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 ZIC5Q96T25 663 aa13.47□□□□□ -0.25
RAPGEF1-202ENST00000372190 PIP5K1BO14986 540 aa13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 TFP02787 698 aa13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 KLK3P07288 261 aaPredicted RBP13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 PABPC4LP0CB38 370 aaKnown RBP13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 EEFSECP57772 596 aaKnown RBP13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 OGDHQ02218 1023 aa13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 PDSS1Q5T2R2 415 aa13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 SLC22A10Q63ZE4 541 aa13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 NIPA2Q8N8Q9 360 aa13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 ADAD1Q96M93 576 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms