RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 IFT27Q9BW83 186 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 PRR14Q9BWN1 585 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 DDX28Q9NUL7 540 aaKnown RBP6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 NLGN3Q9NZ94 848 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 MRPS7Q9Y2R9 242 aaKnown RBP6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 TRPM7Q96QT4 1865 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 BRCA2P51587 3418 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 OR5K4A6NMS3 321 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 H0YAE9 185 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 FOXE1O00358 373 aaPredicted RBP6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 KHNYNO15037 678 aaKnown RBP6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 NARSO43776 548 aaKnown RBP6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 ABCB7O75027 752 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 MT-ND2P03891 347 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 HIST1H2ABP04908 130 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 CEACAM5P06731 702 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 CKMT1AP12532 417 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 GNSP15586 552 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 BCL6P41182 706 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 VBP1P61758 197 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 ZNF33BQ06732 778 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 PMS2P3Q13401 168 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 VEZF1Q14119 521 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 LTB4RQ15722 352 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 LEXMQ3ZCV2 418 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 RBM48Q5RL73 367 aaKnown RBP6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 ZNF773Q6PK81 442 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 SHISA6Q6ZSJ9 500 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 HIST3H2AQ7L7L0 130 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 SLC44A3Q8N4M1 653 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 FBXL6Q8N531 539 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 IQCF1Q8N6M8 205 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 WDR20Q8TBZ3 569 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 ZFP90Q8TF47 636 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 HIST1H2ACQ93077 130 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 TSSK6Q9BXA6 273 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 FOXQ1Q9C009 403 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 SPATA6Q9NWH7 488 aaPredicted RBP6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 MS4A12Q9NXJ0 267 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 CNOT11Q9UKZ1 510 aaKnown RBP6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 GRXCR2A6NFK2 248 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 FAM25AB3EWG3 89 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 FAM25CB3EWG5 89 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 FAM25GB3EWG6 89 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 CHURC1-FNTBB4DL54 471 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 C2CD4DB7Z1M9 353 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 PCDH17O14917 1159 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 TMPRSS11DO60235 418 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 SLC25A12O75746 678 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 MYF6P23409 242 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 SLC9A3P48764 834 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 ST3GAL4Q11206 333 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 GINS1Q14691 196 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 PHF19Q5T6S3 580 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 PTRH1Q86Y79 214 aaKnown RBP6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 OR9A4Q8NGU2 314 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 OR52P1PQ8NH57 321 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 SP7Q8TDD2 431 aaPredicted RBP6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 ARSGQ96EG1 525 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 RNFT2Q96EX2 444 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 SLC6A18Q96N87 628 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 CCDC115Q96NT0 180 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 ZNF300Q96RE9 604 aaPredicted RBP6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 TTTY10Q9BZA0 68 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 ZNF696Q9H7X3 374 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 TBC1D17Q9HA65 648 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 CD93Q9NPY3 652 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 ENPP4Q9Y6X5 453 aa6.75□□□□□ -1.33
TGFBR3-202ENST00000370399 FAM86C2PA6NEL3 165 aa6.74□□□□□ -1.33
TGFBR3-202ENST00000370399 EPOPA6NHQ4 379 aa6.74□□□□□ -1.33
TGFBR3-202ENST00000370399 H0YGG7 62 aa6.74□□□□□ -1.33
TGFBR3-202ENST00000370399 SLC1A7O00341 560 aa6.74□□□□□ -1.33
TGFBR3-202ENST00000370399 PCDHGA12O60330 932 aa6.74□□□□□ -1.33
TGFBR3-202ENST00000370399 AIFM1O95831 613 aa6.74□□□□□ -1.33
TGFBR3-202ENST00000370399 STSP08842 583 aa6.74□□□□□ -1.33
TGFBR3-202ENST00000370399 PRR35P0CG20 571 aa6.74□□□□□ -1.33
TGFBR3-202ENST00000370399 TCF3P15923 654 aa6.74□□□□□ -1.33
TGFBR3-202ENST00000370399 PORP16435 677 aaPredicted RBP6.74□□□□□ -1.33
TGFBR3-202ENST00000370399 AHCYP23526 432 aa6.74□□□□□ -1.33
TGFBR3-202ENST00000370399 ARF3P61204 181 aaPredicted RBP6.74□□□□□ -1.33
TGFBR3-202ENST00000370399 FCHO2Q0JRZ9 810 aa6.74□□□□□ -1.33
TGFBR3-202ENST00000370399 ST3GAL3Q11203 375 aa6.74□□□□□ -1.33
TGFBR3-202ENST00000370399 EXOSC7Q15024 291 aaKnown RBP6.74□□□□□ -1.33
TGFBR3-202ENST00000370399 KIAA0040Q15053 153 aa6.74□□□□□ -1.33
TGFBR3-202ENST00000370399 GPR19Q15760 415 aa6.74□□□□□ -1.33
TGFBR3-202ENST00000370399 NHSL2Q5HYW2 709 aa6.74□□□□□ -1.33
TGFBR3-202ENST00000370399 ARHGAP40Q5TG30 622 aa6.74□□□□□ -1.33
TGFBR3-202ENST00000370399 RTL4Q6ZR62 310 aa6.74□□□□□ -1.33
TGFBR3-202ENST00000370399 MSANTD1Q6ZTZ1 278 aa6.74□□□□□ -1.33
TGFBR3-202ENST00000370399 IKBIPQ70UQ0 350 aa6.74□□□□□ -1.33
TGFBR3-202ENST00000370399 CBLL1Q75N03 491 aa6.74□□□□□ -1.33
TGFBR3-202ENST00000370399 SLC37A2Q8TED4 501 aa6.74□□□□□ -1.33
TGFBR3-202ENST00000370399 SLC38A5Q8WUX1 472 aa6.74□□□□□ -1.33
TGFBR3-202ENST00000370399 TM4SF18Q96CE8 201 aa6.74□□□□□ -1.33
TGFBR3-202ENST00000370399 MTERF3Q96E29 417 aa6.74□□□□□ -1.33
TGFBR3-202ENST00000370399 PHOX2BQ99453 314 aa6.74□□□□□ -1.33
TGFBR3-202ENST00000370399 NDC1Q9BTX1 674 aa6.74□□□□□ -1.33
TGFBR3-202ENST00000370399 OSBPL10Q9BXB5 764 aa6.74□□□□□ -1.33
TGFBR3-202ENST00000370399 FBRSQ9HAH7 460 aa6.74□□□□□ -1.33
TGFBR3-202ENST00000370399 PDE7BQ9NP56 450 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms