RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 GNB5O14775 395 aa14.02□□□□□ -0.17
SSR4-204ENST00000370087 CLGNO14967 610 aa14.02□□□□□ -0.17
SSR4-204ENST00000370087 WISP3O95389 354 aaPredicted RBP14.02□□□□□ -0.17
SSR4-204ENST00000370087 TGFB1P01137 390 aa14.02□□□□□ -0.17
SSR4-204ENST00000370087 PTPN6P29350 595 aa14.02□□□□□ -0.17
SSR4-204ENST00000370087 SSTR4P31391 388 aa14.02□□□□□ -0.17
SSR4-204ENST00000370087 HPDP32754 393 aaPredicted RBP14.02□□□□□ -0.17
SSR4-204ENST00000370087 SSR2P43308 183 aa14.02□□□□□ -0.17
SSR4-204ENST00000370087 RPL21P46778 160 aaKnown RBP14.02□□□□□ -0.17
SSR4-204ENST00000370087 TNFRSF17Q02223 184 aa14.02□□□□□ -0.17
SSR4-204ENST00000370087 SLAMF1Q13291 335 aa14.02□□□□□ -0.17
SSR4-204ENST00000370087 TOMM20Q15388 145 aa14.02□□□□□ -0.17
SSR4-204ENST00000370087 SPRED3Q2MJR0 410 aa14.02□□□□□ -0.17
SSR4-204ENST00000370087 TBCELQ5QJ74 424 aa14.02□□□□□ -0.17
SSR4-204ENST00000370087 DESI1Q6ICB0 168 aa14.02□□□□□ -0.17
SSR4-204ENST00000370087 PRSS57Q6UWY2 283 aa14.02□□□□□ -0.17
SSR4-204ENST00000370087 ZC3HC1Q86WB0 502 aaKnown RBP14.02□□□□□ -0.17
SSR4-204ENST00000370087 PRR22Q8IZ63 422 aa14.02□□□□□ -0.17
SSR4-204ENST00000370087 NKAPQ8N5F7 415 aaKnown RBP14.02□□□□□ -0.17
SSR4-204ENST00000370087 FAM83FQ8NEG4 500 aaPredicted RBP14.02□□□□□ -0.17
SSR4-204ENST00000370087 INTS12Q96CB8 462 aaKnown RBP14.02□□□□□ -0.17
SSR4-204ENST00000370087 ART5Q96L15 291 aa14.02□□□□□ -0.17
SSR4-204ENST00000370087 HS3ST6Q96QI5 342 aa14.02□□□□□ -0.17
SSR4-204ENST00000370087 CCL19Q99731 98 aa14.02□□□□□ -0.17
SSR4-204ENST00000370087 SFXN3Q9BWM7 321 aa14.02□□□□□ -0.17
SSR4-204ENST00000370087 ROGDIQ9GZN7 287 aa14.02□□□□□ -0.17
SSR4-204ENST00000370087 OR51B5Q9H339 312 aa14.02□□□□□ -0.17
SSR4-204ENST00000370087 WWOXQ9NZC7 414 aa14.02□□□□□ -0.17
SSR4-204ENST00000370087 CHMP2BQ9UQN3 213 aa14.02□□□□□ -0.17
SSR4-204ENST00000370087 EIF3LQ9Y262 564 aaKnown RBP14.02□□□□□ -0.17
SSR4-204ENST00000370087 IQANK1A0A1B0GTG1 560 aa14.01□□□□□ -0.17
SSR4-204ENST00000370087 CTIFO43310 598 aaKnown RBP14.01□□□□□ -0.17
SSR4-204ENST00000370087 NID1P14543 1247 aa14.01□□□□□ -0.17
SSR4-204ENST00000370087 GGT5P36269 586 aa14.01□□□□□ -0.17
SSR4-204ENST00000370087 CPOXP36551 454 aa14.01□□□□□ -0.17
SSR4-204ENST00000370087 ELK3P41970 407 aa14.01□□□□□ -0.17
SSR4-204ENST00000370087 CASP3P42574 277 aa14.01□□□□□ -0.17
SSR4-204ENST00000370087 MASP1P48740 699 aa14.01□□□□□ -0.17
SSR4-204ENST00000370087 CBLBQ13191 982 aa14.01□□□□□ -0.17
SSR4-204ENST00000370087 OR4D1Q15615 310 aa14.01□□□□□ -0.17
SSR4-204ENST00000370087 ACKR1Q16570 336 aa14.01□□□□□ -0.17
SSR4-204ENST00000370087 PDK4Q16654 411 aa14.01□□□□□ -0.17
SSR4-204ENST00000370087 STEAP4Q687X5 459 aa14.01□□□□□ -0.17
SSR4-204ENST00000370087 ADGRE4PQ86SQ3 457 aa14.01□□□□□ -0.17
SSR4-204ENST00000370087 ST13P4Q8IZP2 240 aaPredicted RBP14.01□□□□□ -0.17
SSR4-204ENST00000370087 ZPLD1Q8TCW7 415 aa14.01□□□□□ -0.17
SSR4-204ENST00000370087 PIGTQ969N2 578 aa14.01□□□□□ -0.17
SSR4-204ENST00000370087 RBM18Q96H35 190 aaKnown RBP14.01□□□□□ -0.17
SSR4-204ENST00000370087 EFCAB11Q9BUY7 163 aa14.01□□□□□ -0.17
SSR4-204ENST00000370087 SPACA6W5XKT8 324 aa14.01□□□□□ -0.17
SSR4-204ENST00000370087 TNFSF12-TNFSF13A0A0A6YY99 330 aa14□□□□□ -0.17
SSR4-204ENST00000370087 GLOD5A6NK44 160 aa14□□□□□ -0.17
SSR4-204ENST00000370087 A8MXE2 369 aa14□□□□□ -0.17
SSR4-204ENST00000370087 DNALI1O14645 258 aaPredicted RBP14□□□□□ -0.17
SSR4-204ENST00000370087 SNPHO15079 494 aa14□□□□□ -0.17
SSR4-204ENST00000370087 TNFSF13O75888 250 aa14□□□□□ -0.17
SSR4-204ENST00000370087 RCBTB2O95199 551 aa14□□□□□ -0.17
SSR4-204ENST00000370087 PCNAP12004 261 aa14□□□□□ -0.17
SSR4-204ENST00000370087 CYP4B1P13584 511 aa14□□□□□ -0.17
SSR4-204ENST00000370087 LOXP28300 417 aaPredicted RBP14□□□□□ -0.17
SSR4-204ENST00000370087 CCKARP32238 428 aa14□□□□□ -0.17
SSR4-204ENST00000370087 GMPRP36959 345 aa14□□□□□ -0.17
SSR4-204ENST00000370087 FAM27E3Q08E93 113 aa14□□□□□ -0.17
SSR4-204ENST00000370087 CHIT1Q13231 466 aa14□□□□□ -0.17
SSR4-204ENST00000370087 RCAN2Q14206 197 aa14□□□□□ -0.17
SSR4-204ENST00000370087 SF3B4Q15427 424 aaKnown RBP eCLIP14□□□□□ -0.175e-8■■■□□ 18.1
SSR4-204ENST00000370087 AP5B1Q2VPB7 878 aa14□□□□□ -0.17
SSR4-204ENST00000370087 TAGAPQ8N103 731 aa14□□□□□ -0.17
SSR4-204ENST00000370087 PIK3IP1Q96FE7 263 aa14□□□□□ -0.17
SSR4-204ENST00000370087 TMEM41AQ96HV5 264 aa14□□□□□ -0.17
SSR4-204ENST00000370087 VPS39Q96JC1 886 aa14□□□□□ -0.17
SSR4-204ENST00000370087 MARK4Q96L34 752 aa14□□□□□ -0.17
SSR4-204ENST00000370087 WFIKKN1Q96NZ8 548 aa14□□□□□ -0.17
SSR4-204ENST00000370087 KRT12Q99456 494 aa14□□□□□ -0.17
SSR4-204ENST00000370087 CAPS2Q9BXY5 557 aa14□□□□□ -0.17
SSR4-204ENST00000370087 PHACTR1Q9C0D0 580 aa14□□□□□ -0.17
SSR4-204ENST00000370087 KCNF1Q9H3M0 494 aa14□□□□□ -0.17
SSR4-204ENST00000370087 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14□□□□□ -0.17
SSR4-204ENST00000370087 KLHL28Q9NXS3 571 aa14□□□□□ -0.17
SSR4-204ENST00000370087 CLCF1Q9UBD9 225 aa14□□□□□ -0.17
SSR4-204ENST00000370087 CR1P17927 2039 aa13.99□□□□□ -0.17
SSR4-204ENST00000370087 C2orf92A0A1B0GVN3 265 aa13.99□□□□□ -0.17
SSR4-204ENST00000370087 C2orf72A6NCS6 295 aa13.99□□□□□ -0.17
SSR4-204ENST00000370087 OR6C76A6NM76 312 aa13.99□□□□□ -0.17
SSR4-204ENST00000370087 PLPP1O14494 284 aa13.99□□□□□ -0.17
SSR4-204ENST00000370087 TP53I11O14683 189 aa13.99□□□□□ -0.17
SSR4-204ENST00000370087 CASKO14936 926 aa13.99□□□□□ -0.17
SSR4-204ENST00000370087 DYRK3O43781 588 aa13.99□□□□□ -0.17
SSR4-204ENST00000370087 OR10H2O60403 315 aa13.99□□□□□ -0.17
SSR4-204ENST00000370087 CRLF1O75462 422 aa13.99□□□□□ -0.17
SSR4-204ENST00000370087 PIAS1O75925 651 aa13.99□□□□□ -0.17
SSR4-204ENST00000370087 SNX4O95219 450 aa13.99□□□□□ -0.17
SSR4-204ENST00000370087 CNOT4O95628 575 aaKnown RBP13.99□□□□□ -0.17
SSR4-204ENST00000370087 CT62P0C5K7 136 aa13.99□□□□□ -0.17
SSR4-204ENST00000370087 CASP2P42575 452 aa13.99□□□□□ -0.17
SSR4-204ENST00000370087 IRF8Q02556 426 aa13.99□□□□□ -0.17
SSR4-204ENST00000370087 SRYQ05066 204 aa13.99□□□□□ -0.17
SSR4-204ENST00000370087 E2F2Q14209 437 aa13.99□□□□□ -0.17
SSR4-204ENST00000370087 TMEM35AQ53FP2 167 aa13.99□□□□□ -0.17
SSR4-204ENST00000370087 KHDRBS2Q5VWX1 349 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms