RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 GLCCI1Q86VQ1 547 aa16.54■□□□□ 0.24
CHTOP-203ENST00000368690 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.54■□□□□ 0.24
CHTOP-203ENST00000368690 GPR26Q8NDV2 337 aa16.54■□□□□ 0.24
CHTOP-203ENST00000368690 C2orf15Q8WU43 125 aaKnown RBP16.54■□□□□ 0.24
CHTOP-203ENST00000368690 SKA2Q8WVK7 121 aaPredicted RBP16.54■□□□□ 0.24
CHTOP-203ENST00000368690 UFD1Q92890 307 aa16.54■□□□□ 0.24
CHTOP-203ENST00000368690 NACC2Q96BF6 587 aa16.54■□□□□ 0.24
CHTOP-203ENST00000368690 C1GALT1C1Q96EU7 318 aa16.54■□□□□ 0.24
CHTOP-203ENST00000368690 ATG10Q9H0Y0 220 aa16.54■□□□□ 0.24
CHTOP-203ENST00000368690 POLR2J3Q9H1A7 115 aaKnown RBP16.54■□□□□ 0.24
CHTOP-203ENST00000368690 SGK2Q9HBY8 427 aa16.54■□□□□ 0.24
CHTOP-203ENST00000368690 CXXC1Q9P0U4 656 aaPredicted RBP16.54■□□□□ 0.24
CHTOP-203ENST00000368690 COL4A6Q14031 1691 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 GNG14A0A1W2PPG7 69 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 PIPSLA2A3N6 862 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 E7EQ34 232 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 MEN1O00255 615 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 ADAM12O43184 909 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 VNN2O95498 520 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 IFI30P13284 250 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 ZNF8P17098 575 aaPredicted RBP16.53■□□□□ 0.24
CHTOP-203ENST00000368690 POU3F3P20264 500 aaPredicted RBP16.53■□□□□ 0.24
CHTOP-203ENST00000368690 ELAVL4P26378 380 aaKnown RBP16.53■□□□□ 0.24
CHTOP-203ENST00000368690 FEN1P39748 380 aaKnown RBP16.53■□□□□ 0.24
CHTOP-203ENST00000368690 RPS25P62851 125 aaKnown RBP16.53■□□□□ 0.24
CHTOP-203ENST00000368690 RGS1Q08116 209 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 SEC23BQ15437 767 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 CRTC2Q53ET0 693 aaPredicted RBP16.53■□□□□ 0.24
CHTOP-203ENST00000368690 FAM205BPQ63HN1 556 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 REEP3Q6NUK4 255 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 ANKRD54Q6NXT1 300 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 DNAJB7Q7Z6W7 309 aaPredicted RBP16.53■□□□□ 0.24
CHTOP-203ENST00000368690 SLC39A11Q8N1S5 342 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 TM9SF4Q92544 642 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 NECTIN4Q96NY8 510 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 GALNT9Q9HCQ5 603 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 EMC7Q9NPA0 242 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 RHCGQ9UBD6 479 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 RNF215Q9Y6U7 377 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 H3BN98 237 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 SLC19A2O60779 497 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 SOD2P04179 222 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 TPOP07202 933 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 CHI3L1P36222 383 aaPredicted RBP16.53■□□□□ 0.24
CHTOP-203ENST00000368690 INPP1P49441 399 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 RAB40BQ12829 278 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 COX10Q12887 443 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 NDUFA9Q16795 377 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 SYT14P1Q58G82 188 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 VRK3Q8IV63 474 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 DCAF4L2Q8NA75 395 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 OR4K1Q8NGD4 311 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 FGF11Q92914 225 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 TMEM203Q969S6 136 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 MTERF3Q96E29 417 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 ATF6BQ99941 703 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 SPNS1Q9H2V7 528 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 TAS2R7Q9NYW3 318 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 SPG21Q9NZD8 308 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 COMMD3Q9UBI1 195 aa16.53■□□□□ 0.24
CHTOP-203ENST00000368690 OR7A10O76100 309 aa16.52■□□□□ 0.24
CHTOP-203ENST00000368690 GJB5O95377 273 aa16.52■□□□□ 0.24
CHTOP-203ENST00000368690 SOX14O95416 240 aa16.52■□□□□ 0.24
CHTOP-203ENST00000368690 FURINP09958 794 aa16.52■□□□□ 0.24
CHTOP-203ENST00000368690 CTRB1P17538 263 aa16.52■□□□□ 0.24
CHTOP-203ENST00000368690 TNNI3P19429 210 aa16.52■□□□□ 0.24
CHTOP-203ENST00000368690 DGKGP49619 791 aa16.52■□□□□ 0.24
CHTOP-203ENST00000368690 GAS1P54826 345 aa16.52■□□□□ 0.24
CHTOP-203ENST00000368690 EFNB1P98172 346 aa16.52■□□□□ 0.24
CHTOP-203ENST00000368690 IL18Q14116 193 aa16.52■□□□□ 0.24
CHTOP-203ENST00000368690 P2RY14Q15391 338 aa16.52■□□□□ 0.24
CHTOP-203ENST00000368690 SLC5A12Q1EHB4 618 aa16.52■□□□□ 0.24
CHTOP-203ENST00000368690 COL28A1Q2UY09 1125 aa16.52■□□□□ 0.24
CHTOP-203ENST00000368690 HECTD3Q5T447 861 aa16.52■□□□□ 0.24
CHTOP-203ENST00000368690 ZDHHC20Q5W0Z9 365 aa16.52■□□□□ 0.24
CHTOP-203ENST00000368690 CTRB2Q6GPI1 263 aa16.52■□□□□ 0.24
CHTOP-203ENST00000368690 PGBD2Q6P3X8 592 aa16.52■□□□□ 0.24
CHTOP-203ENST00000368690 ZNF680Q8NEM1 530 aa16.52■□□□□ 0.24
CHTOP-203ENST00000368690 CHFRQ96EP1 664 aa16.52■□□□□ 0.24
CHTOP-203ENST00000368690 PDXPQ96GD0 296 aa16.52■□□□□ 0.24
CHTOP-203ENST00000368690 FUZQ9BT04 418 aa16.52■□□□□ 0.24
CHTOP-203ENST00000368690 SLC28A3Q9HAS3 691 aa16.52■□□□□ 0.24
CHTOP-203ENST00000368690 ACAD8Q9UKU7 415 aa16.52■□□□□ 0.24
CHTOP-203ENST00000368690 KCNE2Q9Y6J6 123 aa16.52■□□□□ 0.24
CHTOP-203ENST00000368690 FAM227AF5H4B4 570 aa16.51■□□□□ 0.23
CHTOP-203ENST00000368690 SMLR1H3BR10 107 aa16.51■□□□□ 0.23
CHTOP-203ENST00000368690 OR10H3O60404 316 aa16.51■□□□□ 0.23
CHTOP-203ENST00000368690 PLOD3O60568 738 aa16.51■□□□□ 0.23
CHTOP-203ENST00000368690 HPGDSO60760 199 aa16.51■□□□□ 0.23
CHTOP-203ENST00000368690 TP53P04637 393 aaPredicted RBP16.51■□□□□ 0.23
CHTOP-203ENST00000368690 H1F0P07305 194 aaKnown RBP16.51■□□□□ 0.23
CHTOP-203ENST00000368690 SLC6A1P30531 599 aa16.51■□□□□ 0.23
CHTOP-203ENST00000368690 ATP12AP54707 1039 aa16.51■□□□□ 0.23
CHTOP-203ENST00000368690 CASP9P55211 416 aa16.51■□□□□ 0.23
CHTOP-203ENST00000368690 DSTNP60981 165 aa16.51■□□□□ 0.23
CHTOP-203ENST00000368690 ADAM15Q13444 863 aa16.51■□□□□ 0.23
CHTOP-203ENST00000368690 SDE2Q6IQ49 451 aa16.51■□□□□ 0.23
CHTOP-203ENST00000368690 TMIGD1Q6UXZ0 262 aa16.51■□□□□ 0.23
CHTOP-203ENST00000368690 WDR53Q7Z5U6 358 aaPredicted RBP16.51■□□□□ 0.23
CHTOP-203ENST00000368690 OR7G3Q8NG95 312 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms