RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 PRICKLE4Q2TBC4 344 aa12.95□□□□□ -0.34
TPM3-211ENST00000368531 FAM174BQ3ZCQ3 159 aa12.95□□□□□ -0.34
TPM3-211ENST00000368531 TRMT12Q53H54 448 aaKnown RBP12.95□□□□□ -0.34
TPM3-211ENST00000368531 SPANXN4Q5MJ08 99 aa12.95□□□□□ -0.34
TPM3-211ENST00000368531 IRAK1BP1Q5VVH5 260 aa12.95□□□□□ -0.34
TPM3-211ENST00000368531 FCRLBQ6BAA4 426 aa12.95□□□□□ -0.34
TPM3-211ENST00000368531 SPATA21Q7Z572 469 aa12.95□□□□□ -0.34
TPM3-211ENST00000368531 GALNT16Q8N428 558 aa12.95□□□□□ -0.34
TPM3-211ENST00000368531 SIRT6Q8N6T7 355 aa12.95□□□□□ -0.34
TPM3-211ENST00000368531 MORN4Q8NDC4 146 aa12.95□□□□□ -0.34
TPM3-211ENST00000368531 SUN3Q8TAQ9 357 aa12.95□□□□□ -0.34
TPM3-211ENST00000368531 M1APQ8TC57 530 aa12.95□□□□□ -0.34
TPM3-211ENST00000368531 BRIX1Q8TDN6 353 aaKnown RBP12.95□□□□□ -0.34
TPM3-211ENST00000368531 ZNF721Q8TF20 911 aa12.95□□□□□ -0.34
TPM3-211ENST00000368531 THAP3Q8WTV1 239 aaPredicted RBP12.95□□□□□ -0.34
TPM3-211ENST00000368531 COQ8BQ96D53 544 aa12.95□□□□□ -0.34
TPM3-211ENST00000368531 AMDHD1Q96NU7 426 aa12.95□□□□□ -0.34
TPM3-211ENST00000368531 ARHGAP9Q9BRR9 750 aa12.95□□□□□ -0.34
TPM3-211ENST00000368531 CLMPQ9H6B4 373 aa12.95□□□□□ -0.34
TPM3-211ENST00000368531 LIN28AQ9H9Z2 209 aaKnown RBP12.95□□□□□ -0.34
TPM3-211ENST00000368531 SDR39U1Q9NRG7 319 aaPredicted RBP12.95□□□□□ -0.34
TPM3-211ENST00000368531 ATAD3AQ9NVI7 634 aa12.95□□□□□ -0.34
TPM3-211ENST00000368531 MAT2BQ9NZL9 334 aa12.95□□□□□ -0.34
TPM3-211ENST00000368531 BCAP29Q9UHQ4 241 aa12.95□□□□□ -0.34
TPM3-211ENST00000368531 TRIM33Q9UPN9 1127 aa12.95□□□□□ -0.34
TPM3-211ENST00000368531 COPG1Q9Y678 874 aaKnown RBP12.95□□□□□ -0.34
TPM3-211ENST00000368531 CEP295Q9C0D2 2601 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 FREM2Q5SZK8 3169 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 A0A1W2PRB8 838 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 NME6O75414 186 aaPredicted RBP12.94□□□□□ -0.34
TPM3-211ENST00000368531 C6orf47O95873 294 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 SERPINA7P05543 415 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 ABCB1P08183 1280 aaPredicted RBP12.94□□□□□ -0.34
TPM3-211ENST00000368531 PCSK2P16519 638 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 KIR3DL1P43629 444 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 ST13P50502 369 aaKnown RBP12.94□□□□□ -0.34
TPM3-211ENST00000368531 CLCN2P51788 898 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 C21orf58P58505 322 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 PHC1P78364 1004 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 SRSF11Q05519 484 aaKnown RBP12.94□□□□□ -0.34
TPM3-211ENST00000368531 MGAT2Q10469 447 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 SQLEQ14534 574 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 TERF2Q15554 542 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 CEBPEQ15744 281 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 SPRED3Q2MJR0 410 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 AGKQ53H12 422 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 B3GNTL1Q67FW5 361 aaPredicted RBP12.94□□□□□ -0.34
TPM3-211ENST00000368531 TMEM107Q6UX40 140 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 ANKRD46Q86W74 232 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 APLFQ8IW19 511 aaPredicted RBP12.94□□□□□ -0.34
TPM3-211ENST00000368531 CLECL1Q8IZS7 167 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 VWA5B2Q8N398 1253 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 SIMC1Q8NDZ2 872 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 FDCSPQ8NFU4 85 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 OR1N1Q8NGS0 311 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 ZFP28Q8NHY6 868 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 STON2Q8WXE9 905 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 TESCQ96BS2 214 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 ZBED6CLQ96FA7 236 aaPredicted RBP12.94□□□□□ -0.34
TPM3-211ENST00000368531 VMP1Q96GC9 406 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 FBXL20Q96IG2 436 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 ART5Q96L15 291 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 BHLHE41Q9C0J9 482 aaPredicted RBP12.94□□□□□ -0.34
TPM3-211ENST00000368531 LHPPQ9H008 270 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 EPN3Q9H201 632 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 MMP25Q9NPA2 562 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 GPR83Q9NYM4 423 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 ZIM2Q9NZV7 527 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 CCDC167Q9P0B6 97 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 PTGFRNQ9P2B2 879 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 COPS7AQ9UBW8 275 aa12.94□□□□□ -0.34
TPM3-211ENST00000368531 ZNF223Q9UK11 482 aaPredicted RBP12.94□□□□□ -0.34
TPM3-211ENST00000368531 NUP214P35658 2090 aaPredicted RBP12.93□□□□□ -0.34
TPM3-211ENST00000368531 NR5A2O00482 541 aa12.93□□□□□ -0.34
TPM3-211ENST00000368531 PRKNO60260 465 aaPredicted RBP12.93□□□□□ -0.34
TPM3-211ENST00000368531 CPSF4O95639 269 aaKnown RBP12.93□□□□□ -0.34
TPM3-211ENST00000368531 CD1EP15812 388 aa12.93□□□□□ -0.34
TPM3-211ENST00000368531 GALNSP34059 522 aa12.93□□□□□ -0.34
TPM3-211ENST00000368531 MC3RP41968 323 aa12.93□□□□□ -0.34
TPM3-211ENST00000368531 CDK9P50750 372 aaKnown RBP12.93□□□□□ -0.34
TPM3-211ENST00000368531 GPR143P51810 404 aa12.93□□□□□ -0.34
TPM3-211ENST00000368531 POLR2JP52435 117 aaKnown RBP12.93□□□□□ -0.34
TPM3-211ENST00000368531 POLE2P56282 527 aa12.93□□□□□ -0.34
TPM3-211ENST00000368531 WNT3P56703 355 aa12.93□□□□□ -0.34
TPM3-211ENST00000368531 MAP4K2Q12851 820 aa12.93□□□□□ -0.34
TPM3-211ENST00000368531 ZNF628Q5EBL2 1059 aa12.93□□□□□ -0.34
TPM3-211ENST00000368531 RNF111Q6ZNA4 994 aa12.93□□□□□ -0.34
TPM3-211ENST00000368531 SZRD1Q7Z422 152 aa12.93□□□□□ -0.34
TPM3-211ENST00000368531 APCDD1LQ8NCL9 501 aa12.93□□□□□ -0.34
TPM3-211ENST00000368531 OR7G2Q8NG99 324 aa12.93□□□□□ -0.34
TPM3-211ENST00000368531 ELP5Q8TE02 316 aa12.93□□□□□ -0.34
TPM3-211ENST00000368531 ZNF764Q96H86 408 aaPredicted RBP12.93□□□□□ -0.34
TPM3-211ENST00000368531 OR52E6Q96RD3 313 aa12.93□□□□□ -0.34
TPM3-211ENST00000368531 DEFB126Q9BYW3 111 aa12.93□□□□□ -0.34
TPM3-211ENST00000368531 SNX8Q9Y5X2 465 aa12.93□□□□□ -0.34
TPM3-211ENST00000368531 FAM234BA2RU67 622 aa12.92□□□□□ -0.34
TPM3-211ENST00000368531 SNX3O60493 162 aa12.92□□□□□ -0.34
TPM3-211ENST00000368531 ZFAND5O76080 213 aa12.92□□□□□ -0.34
TPM3-211ENST00000368531 IGKV3-11P04433 115 aa12.92□□□□□ -0.34
TPM3-211ENST00000368531 ITGB2P05107 769 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms