RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 IMPAD1Q9NX62 359 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 VPS29Q9UBQ0 182 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 AASSQ9UDR5 926 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.95□□□□□ -0.66
USF1-201ENST00000368019 NOX1Q9Y5S8 564 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 GCN1Q92616 2671 aaKnown RBP10.94□□□□□ -0.66
USF1-201ENST00000368019 DSPPQ9NZW4 1301 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 CENPXA8MT69 81 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 FAM25AB3EWG3 89 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 FAM25CB3EWG5 89 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 FAM25GB3EWG6 89 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 QSOX1O00391 747 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 TNFRSF21O75509 655 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 AP2A2O94973 939 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 DIRAS1O95057 198 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 IGSF6O95976 241 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 VIPP01282 170 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 SCG5P05408 212 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 IGHV4-34P06331 123 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 STSP08842 583 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 ITGB6P18564 788 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 TCEA1P23193 301 aaKnown RBP10.94□□□□□ -0.66
USF1-201ENST00000368019 ITGB7P26010 798 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 CD27P26842 260 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 GTF2E2P29084 291 aaKnown RBP10.94□□□□□ -0.66
USF1-201ENST00000368019 TGFBR1P36897 503 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 CRYBA2P53672 197 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 CHRNEQ04844 493 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 ACSM2AQ08AH3 577 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 ASAH1Q13510 395 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 CAMK2BQ13554 666 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 ZNF630Q2M218 657 aaPredicted RBP10.94□□□□□ -0.66
USF1-201ENST00000368019 PTCHD3Q3KNS1 767 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 ATAD3CQ5T2N8 411 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 GCNT6Q5T4J0 391 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 CPTPQ5TA50 214 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 ACSM2BQ68CK6 577 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 PLAG1Q6DJT9 500 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 XKRXQ6PP77 449 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.94□□□□□ -0.66
USF1-201ENST00000368019 SLC7A5P1Q8MH63 180 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 CYP4Z2PQ8N1L4 340 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 OXR1Q8N573 874 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 SLC5A8Q8N695 610 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 FIBINQ8TAL6 211 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 UBE2FQ969M7 185 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 MTERF3Q96E29 417 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 CCM2Q9BSQ5 444 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 CENPOQ9BU64 300 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 BTBD1Q9H0C5 482 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 RSPH9Q9H1X1 276 aaPredicted RBP10.94□□□□□ -0.66
USF1-201ENST00000368019 SGK2Q9HBY8 427 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 SLC25A19Q9HC21 320 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 FTSJ1Q9UET6 329 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 N6AMT1Q9Y5N5 214 aa10.94□□□□□ -0.66
USF1-201ENST00000368019 PIKFYVEQ9Y2I7 2098 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 H0Y8X5 98 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 SMAD6O43541 496 aaKnown RBP10.93□□□□□ -0.66
USF1-201ENST00000368019 TBL1XO60907 577 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 CCNB2O95067 398 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 CPSF4O95639 269 aaKnown RBP10.93□□□□□ -0.66
USF1-201ENST00000368019 ADAP00813 363 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 DNTTP04053 509 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 YES1P07947 543 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 GSTM1P09488 218 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 ALPIP09923 528 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 GAAP10253 952 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 DDX5P17844 614 aaKnown RBP10.93□□□□□ -0.66
USF1-201ENST00000368019 RHCEP18577 417 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 IDSP22304 550 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 PTBP1P26599 531 aaKnown RBP eCLIP10.93□□□□□ -0.66
USF1-201ENST00000368019 TNFSF8P32971 234 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 CSTF2P33240 577 aaKnown RBP eCLIP10.93□□□□□ -0.66
USF1-201ENST00000368019 CA5AP35218 305 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 HNF1BP35680 557 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 NR4A2P43354 598 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 XCR1P46094 333 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 RORCP51449 518 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 CHIT1Q13231 466 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 SUZ12Q15022 739 aaKnown RBP10.93□□□□□ -0.66
USF1-201ENST00000368019 NCF4Q15080 339 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 ZFP69Q49AA0 526 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 ZNF776Q68DI1 518 aaPredicted RBP10.93□□□□□ -0.66
USF1-201ENST00000368019 TIGD3Q6B0B8 471 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 TRIM40Q6P9F5 258 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 ZNF517Q6ZMY9 492 aaPredicted RBP10.93□□□□□ -0.66
USF1-201ENST00000368019 USP30Q70CQ3 517 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 NANOGNBQ7Z5D8 188 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 SLC22A15Q8IZD6 547 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 CLDN19Q8N6F1 224 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 GDPD1Q8N9F7 314 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 FAM46DQ8NEK8 389 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 OR10Q1Q8NGQ4 319 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 BTN2A2Q8WVV5 523 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 TTC9Q92623 222 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 ECHDC3Q96DC8 303 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 MTFMTQ96DP5 389 aaKnown RBP10.93□□□□□ -0.66
USF1-201ENST00000368019 TPD52L3Q96J77 140 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 ST6GAL2Q96JF0 529 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 EGLN2Q96KS0 407 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 242.3 ms