RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 GSTM2P28161 218 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 HK3P52790 923 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 HHEXQ03014 270 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 LIPEQ05469 1076 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 ZBED5Q49AG3 693 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 FHL5Q5TD97 284 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 MCOLN2Q8IZK6 566 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 PGAM4Q8N0Y7 254 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 MRPL43Q8N983 215 aaKnown RBP8.28□□□□□ -1.08
SYNE1-206ENST00000367253 DTWD2Q8NBA8 298 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 OR2L8Q8NGY9 312 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 OR52E6Q96RD3 313 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 WDR77Q9BQA1 342 aaPredicted RBP8.28□□□□□ -1.08
SYNE1-206ENST00000367253 UCK2Q9BZX2 261 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 OBP2AQ9NY56 170 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 CNTN3Q9P232 1028 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 FNIP2Q9P278 1114 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 ANXA2P2A6NMY6 339 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 DVL2O14641 736 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 PDCD5O14737 125 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 AZIN1O14977 448 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 ACOX3O15254 700 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 SLC22A3O75751 556 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 AKAP3O75969 853 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 S100A8P05109 93 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 CD44P16070 742 aaKnown RBP8.27□□□□□ -1.09
SYNE1-206ENST00000367253 GNAZP19086 355 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 UGT2B10P36537 528 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 TAS2R41P59536 307 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 IRF9Q00978 393 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 NAE1Q13564 534 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 KLHDC10Q6PID8 442 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 CUZD1Q86UP6 607 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 CNEP1R1Q8N9A8 125 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 LPGAT1Q92604 370 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 EXTL1Q92935 676 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 SARAFQ96BY9 339 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 ZNF641Q96N77 438 aaPredicted RBP8.27□□□□□ -1.09
SYNE1-206ENST00000367253 NPAS2Q99743 824 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 TPPP3Q9BW30 176 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 ULBP3Q9BZM4 244 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 PPIL3Q9H2H8 161 aaKnown RBP8.27□□□□□ -1.09
SYNE1-206ENST00000367253 ZNF355PQ9NSJ1 428 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 LSM5Q9Y4Y9 91 aaKnown RBP8.27□□□□□ -1.09
SYNE1-206ENST00000367253 TMEM184BQ9Y519 407 aaPredicted RBP8.27□□□□□ -1.09
SYNE1-206ENST00000367253 MYH14Q7Z406 1995 aaKnown RBP8.27□□□□□ -1.09
SYNE1-206ENST00000367253 PRORSD1PA6NEY8 169 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 SLITRK3O94933 977 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 WNT11O96014 354 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 ASGR2P07307 311 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 IL7P13232 177 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 AHCYP23526 432 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 OR3A3P47888 321 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 OR3A2P47893 321 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 NUBP1P53384 320 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 ENPP2Q13822 863 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 ZNF124Q15973 351 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 QPCTQ16769 361 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 TLDC1Q6P9B6 456 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 GPRIN3Q6ZVF9 776 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 SPPL2CQ8IUH8 684 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 SVOPLQ8N434 492 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 TOMM5Q8N4H5 51 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 IL17RCQ8NAC3 791 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 STYXQ8WUJ0 223 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 UFD1Q92890 307 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 RPL10LQ96L21 214 aaKnown RBP8.27□□□□□ -1.09
SYNE1-206ENST00000367253 CITED2Q99967 270 aaPredicted RBP8.27□□□□□ -1.09
SYNE1-206ENST00000367253 DPCDQ9BVM2 203 aaPredicted RBP8.27□□□□□ -1.09
SYNE1-206ENST00000367253 NMUR2Q9GZQ4 415 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 FKRPQ9H9S5 495 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 C1orf109Q9NX04 203 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 RCOR3Q9P2K3 495 aaPredicted RBP8.27□□□□□ -1.09
SYNE1-206ENST00000367253 HRH3Q9Y5N1 445 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 NHSQ6T4R5 1651 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 MMP20O60882 483 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 TULP3O75386 442 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 RAB36O95755 333 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 IL2RAP01589 272 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 MAOBP27338 520 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 BMI1P35226 326 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 MSX2P35548 267 aaPredicted RBP8.27□□□□□ -1.09
SYNE1-206ENST00000367253 CRISP1P54107 249 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 ECM1Q16610 540 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 GUK1Q16774 197 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 CDCA2Q69YH5 1023 aaPredicted RBP8.27□□□□□ -1.09
SYNE1-206ENST00000367253 RFWD3Q6PCD5 774 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 GFRALQ6UXV0 394 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 MBOAT1Q6ZNC8 495 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 DCAF4L2Q8NA75 395 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 CYB5D2Q8WUJ1 264 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 SCGB3A2Q96PL1 93 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 ELOVL1Q9BW60 279 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 OR8D2Q9GZM6 311 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 IL21RQ9HBE5 538 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 CD320Q9NPF0 282 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 IL17RBQ9NRM6 502 aa8.27□□□□□ -1.09
SYNE1-206ENST00000367253 RYDENQ9NUL5 291 aaKnown RBP8.27□□□□□ -1.09
SYNE1-206ENST00000367253 CXXC1Q9P0U4 656 aaPredicted RBP8.27□□□□□ -1.09
SYNE1-206ENST00000367253 MYO7AQ13402 2215 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms