RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 CBLL1Q75N03 491 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 GTF2IRD2Q86UP8 949 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 CHST4Q8NCG5 386 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 GPR78Q96P69 363 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 NEDD4LQ96PU5 975 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 GNG8Q9UK08 70 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 CPNE6O95741 557 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 TRA2BP62995 288 aaKnown RBP11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 SYT14Q8NB59 555 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 PCDH17O14917 1159 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 MITFO75030 526 aaPredicted RBP11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 GNALP38405 381 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 MLLT11Q13015 90 aaPredicted RBP11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 CRHR2Q13324 411 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 AAK1Q2M2I8 961 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 VITQ6UXI7 678 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 B3GNT7Q8NFL0 401 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 SGCDQ92629 289 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 HMX3A6NHT5 357 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 RASGRP1O95267 797 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 GABRB3P28472 473 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 ACTBP60709 375 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 ACTG1P63261 375 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 DECR1Q16698 335 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 DESI1Q6ICB0 168 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 PIANPQ8IYJ0 282 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 AKT2P31751 481 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 AP2S1P53680 142 aaPredicted RBP11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 E2F1Q01094 437 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 ZNF776Q68DI1 518 aaPredicted RBP11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 SYNPOQ8N3V7 929 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 OR7G3Q8NG95 312 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 ZCCHC10Q8TBK6 192 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 TMEM40Q8WWA1 233 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 TXNDC15Q96J42 360 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 INPP5KQ9BT40 448 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 CPEB1Q9BZB8 566 aaKnown RBP11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 EXO5Q9H790 373 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 SCDO00767 359 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 EEF1E1O43324 174 aaKnown RBP11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 HTR2BP41595 481 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 CTBP2P56545 445 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 LRRTM3Q86VH5 581 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 HERVK_113Q902F9 699 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 IRF7Q92985 503 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 CACNG6Q9BXT2 260 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 APC2O95996 2303 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 PGGT1BP53609 377 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 ZNF440Q8IYI8 595 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 ARRDC2Q8TBH0 407 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 C19orf43Q9BQ61 176 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 PLEKHA6Q9Y2H5 1048 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 DISC1C4P0D8 188 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 GPR37L1O60883 481 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 ETFAP13804 333 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 LMAN2Q12907 356 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 RAB8BQ92930 207 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 HRASLS5Q96KN8 279 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 SLC35C2Q9NQQ7 365 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 HEATR5BQ9P2D3 2071 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 LEFTY1O75610 366 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 CYB5AP00167 134 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 OR12D1P0DN82 309 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 MRPS10P82664 201 aaKnown RBP11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 OR51G2Q8NGK0 314 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 FAM110BQ8TC76 370 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 ECHDC3Q96DC8 303 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 TTYH2Q9BSA4 534 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 LY75O60449 1722 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 ZNF195O14628 629 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 LYRM1O43325 122 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 ACP5P13686 325 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 HTR6P50406 440 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 FAM182AQ5T1J6 154 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 CEACAM19Q7Z692 300 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 TAPBPLQ9BX59 468 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 MSRAQ9UJ68 235 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 PADI2Q9Y2J8 665 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 FOXD2O60548 495 aaPredicted RBP11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 KDM4BO94953 1096 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 PRKCZQ05513 592 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 SPCS2Q15005 226 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 PLEKHN1Q494U1 663 aaPredicted RBP11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 FAM180AQ6UWF9 173 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 SIMC1Q8NDZ2 872 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 C16orf78Q8WTQ4 265 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 NUP50Q9UKX7 468 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 GALTP07902 379 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 H2AFB2P0C5Z0 115 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 ETV3P41162 512 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 TRMT2BQ96GJ1 504 aaKnown RBP11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 C17orf62Q9BQA9 187 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 CPPED1Q9BRF8 314 aaPredicted RBP11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 DPEP2Q9H4A9 486 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 ERCC1P07992 297 aaPredicted RBP11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 ALG5Q9Y673 324 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 H7C2Y5 167 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 PTBP1P26599 531 aaKnown RBP eCLIP11.25□□□□□ -0.611e-6■■■■□ 23
CDC42BPA-202ENST00000366764 XKR7Q5GH72 579 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms