RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 SIAH3Q8IW03 269 aa3.17□□□□□ -1.9
RNU4-28P-201ENST00000364739 FBXO16Q8IX29 292 aaPredicted RBP3.17□□□□□ -1.9
RNU4-28P-201ENST00000364739 ARL14Q8N4G2 192 aa3.17□□□□□ -1.9
RNU4-28P-201ENST00000364739 VN1R17PQ8TDU5 208 aa3.17□□□□□ -1.9
RNU4-28P-201ENST00000364739 CRYGNQ8WXF5 182 aa3.17□□□□□ -1.9
RNU4-28P-201ENST00000364739 IKZF5Q9H5V7 419 aa3.17□□□□□ -1.9
RNU4-28P-201ENST00000364739 DDX28Q9NUL7 540 aaKnown RBP3.17□□□□□ -1.9
RNU4-28P-201ENST00000364739 VNN3Q9NY84 501 aa3.17□□□□□ -1.9
RNU4-28P-201ENST00000364739 CNIH4Q9P003 139 aa3.17□□□□□ -1.9
RNU4-28P-201ENST00000364739 MOKQ9UQ07 419 aa3.17□□□□□ -1.9
RNU4-28P-201ENST00000364739 KLF2Q9Y5W3 355 aaPredicted RBP3.17□□□□□ -1.9
RNU4-28P-201ENST00000364739 SLC15A5A6NIM6 579 aa3.16□□□□□ -1.9
RNU4-28P-201ENST00000364739 SLC33A1O00400 549 aaPredicted RBP3.16□□□□□ -1.9
RNU4-28P-201ENST00000364739 CDX4O14627 284 aaPredicted RBP3.16□□□□□ -1.9
RNU4-28P-201ENST00000364739 PRAMEF12O95522 483 aa3.16□□□□□ -1.9
RNU4-28P-201ENST00000364739 GOT2P00505 430 aaKnown RBP3.16□□□□□ -1.9
RNU4-28P-201ENST00000364739 ATP6V1B1P15313 513 aa3.16□□□□□ -1.9
RNU4-28P-201ENST00000364739 IDSP22304 550 aa3.16□□□□□ -1.9
RNU4-28P-201ENST00000364739 UCP1P25874 307 aa3.16□□□□□ -1.9
RNU4-28P-201ENST00000364739 SERPINH1P50454 418 aaKnown RBP3.16□□□□□ -1.9
RNU4-28P-201ENST00000364739 NDST1P52848 882 aa3.16□□□□□ -1.9
RNU4-28P-201ENST00000364739 SCARB2Q14108 478 aa3.16□□□□□ -1.9
RNU4-28P-201ENST00000364739 TRADDQ15628 312 aa3.16□□□□□ -1.9
RNU4-28P-201ENST00000364739 KBTBD12Q3ZCT8 623 aa3.16□□□□□ -1.9
RNU4-28P-201ENST00000364739 SEL1L2Q5TEA6 688 aa3.16□□□□□ -1.9
RNU4-28P-201ENST00000364739 KCTD11Q693B1 232 aa3.16□□□□□ -1.9
RNU4-28P-201ENST00000364739 ZNF544Q6NX49 715 aa3.16□□□□□ -1.9
RNU4-28P-201ENST00000364739 GCNT7Q6ZNI0 430 aa3.16□□□□□ -1.9
RNU4-28P-201ENST00000364739 VASH2Q86V25 355 aa3.16□□□□□ -1.9
RNU4-28P-201ENST00000364739 UBQLNLQ8IYU4 475 aa3.16□□□□□ -1.9
RNU4-28P-201ENST00000364739 LINC00518Q8N0U6 118 aa3.16□□□□□ -1.9
RNU4-28P-201ENST00000364739 COG3Q96JB2 828 aa3.16□□□□□ -1.9
RNU4-28P-201ENST00000364739 CAPNS2Q96L46 248 aa3.16□□□□□ -1.9
RNU4-28P-201ENST00000364739 PAXXQ9BUH6 204 aa3.16□□□□□ -1.9
RNU4-28P-201ENST00000364739 CACNG6Q9BXT2 260 aa3.16□□□□□ -1.9
RNU4-28P-201ENST00000364739 SLC26A1Q9H2B4 701 aa3.16□□□□□ -1.9
RNU4-28P-201ENST00000364739 TIGARQ9NQ88 270 aa3.16□□□□□ -1.9
RNU4-28P-201ENST00000364739 KCNK6Q9Y257 313 aa3.16□□□□□ -1.9
RNU4-28P-201ENST00000364739 IGHV3OR16-12A0A075B7B8 117 aa3.15□□□□□ -1.91
RNU4-28P-201ENST00000364739 IGHV3-35A0A0C4DH35 117 aa3.15□□□□□ -1.91
RNU4-28P-201ENST00000364739 C13orf42A0A1B0GVH6 325 aa3.15□□□□□ -1.91
RNU4-28P-201ENST00000364739 SMIM30A4D0T7 59 aa3.15□□□□□ -1.91
RNU4-28P-201ENST00000364739 FAM149AA5PLN7 773 aa3.15□□□□□ -1.91
RNU4-28P-201ENST00000364739 YJEFN3A6XGL0 299 aa3.15□□□□□ -1.91
RNU4-28P-201ENST00000364739 TNFSF11O14788 317 aa3.15□□□□□ -1.91
RNU4-28P-201ENST00000364739 RTL8CO15255 209 aa3.15□□□□□ -1.91
RNU4-28P-201ENST00000364739 P0C879 139 aa3.15□□□□□ -1.91
RNU4-28P-201ENST00000364739 MBL2P11226 248 aaPredicted RBP3.15□□□□□ -1.91
RNU4-28P-201ENST00000364739 LAMP1P11279 417 aa3.15□□□□□ -1.91
RNU4-28P-201ENST00000364739 SLC7A2P52569 658 aa3.15□□□□□ -1.91
RNU4-28P-201ENST00000364739 SMSP52788 366 aa3.15□□□□□ -1.91
RNU4-28P-201ENST00000364739 RPS4XP62701 263 aaKnown RBP3.15□□□□□ -1.91
RNU4-28P-201ENST00000364739 TGIF1Q15583 401 aa3.15□□□□□ -1.91
RNU4-28P-201ENST00000364739 STX1AQ16623 288 aa3.15□□□□□ -1.91
RNU4-28P-201ENST00000364739 EPC2Q52LR7 807 aa3.15□□□□□ -1.91
RNU4-28P-201ENST00000364739 TCHHL1Q5QJ38 904 aaPredicted RBP3.15□□□□□ -1.91
RNU4-28P-201ENST00000364739 C1orf189Q5VU69 101 aa3.15□□□□□ -1.91
RNU4-28P-201ENST00000364739 PRAMEF8Q5VWM4 474 aa3.15□□□□□ -1.91
RNU4-28P-201ENST00000364739 BIRC7Q96CA5 298 aa3.15□□□□□ -1.91
RNU4-28P-201ENST00000364739 VSIG2Q96IQ7 327 aa3.15□□□□□ -1.91
RNU4-28P-201ENST00000364739 DDX50Q9BQ39 737 aaKnown RBP3.15□□□□□ -1.91
RNU4-28P-201ENST00000364739 JPH2Q9BR39 696 aaPredicted RBP3.15□□□□□ -1.91
RNU4-28P-201ENST00000364739 COPS7BQ9H9Q2 264 aaPredicted RBP3.15□□□□□ -1.91
RNU4-28P-201ENST00000364739 FRG2CA6NGY1 282 aa3.14□□□□□ -1.91
RNU4-28P-201ENST00000364739 FAM220BPB1ANY3 271 aa3.14□□□□□ -1.91
RNU4-28P-201ENST00000364739 H0Y9J4 135 aa3.14□□□□□ -1.91
RNU4-28P-201ENST00000364739 TSPAN2O60636 221 aa3.14□□□□□ -1.91
RNU4-28P-201ENST00000364739 REC8O95072 547 aa3.14□□□□□ -1.91
RNU4-28P-201ENST00000364739 IGHV3-9P01782 118 aa3.14□□□□□ -1.91
RNU4-28P-201ENST00000364739 CT45A8P0DMV1 189 aa3.14□□□□□ -1.91
RNU4-28P-201ENST00000364739 CT45A9P0DMV2 189 aa3.14□□□□□ -1.91
RNU4-28P-201ENST00000364739 RGRP47804 291 aa3.14□□□□□ -1.91
RNU4-28P-201ENST00000364739 ASIC1P78348 528 aa3.14□□□□□ -1.91
RNU4-28P-201ENST00000364739 HSPA14Q0VDF9 509 aa3.14□□□□□ -1.91
RNU4-28P-201ENST00000364739 GK2Q14410 553 aaPredicted RBP3.14□□□□□ -1.91
RNU4-28P-201ENST00000364739 MICAQ29983 383 aa3.14□□□□□ -1.91
RNU4-28P-201ENST00000364739 C2orf83Q53S99 150 aa3.14□□□□□ -1.91
RNU4-28P-201ENST00000364739 CT45A2Q5DJT8 189 aa3.14□□□□□ -1.91
RNU4-28P-201ENST00000364739 RTL6Q6ICC9 239 aa3.14□□□□□ -1.91
RNU4-28P-201ENST00000364739 ADAMTSL5Q6ZMM2 481 aa3.14□□□□□ -1.91
RNU4-28P-201ENST00000364739 LINC00696Q6ZRV3 163 aa3.14□□□□□ -1.91
RNU4-28P-201ENST00000364739 KCTD9Q7L273 389 aa3.14□□□□□ -1.91
RNU4-28P-201ENST00000364739 CASD1Q96PB1 797 aa3.14□□□□□ -1.91
RNU4-28P-201ENST00000364739 ADPGKQ9BRR6 497 aa3.14□□□□□ -1.91
RNU4-28P-201ENST00000364739 FUNDC2Q9BWH2 189 aa3.14□□□□□ -1.91
RNU4-28P-201ENST00000364739 NAPBQ9H115 298 aa3.14□□□□□ -1.91
RNU4-28P-201ENST00000364739 RNPEPL1Q9HAU8 725 aa3.14□□□□□ -1.91
RNU4-28P-201ENST00000364739 IMPAD1Q9NX62 359 aa3.14□□□□□ -1.91
RNU4-28P-201ENST00000364739 TEKT2Q9UIF3 430 aa3.14□□□□□ -1.91
RNU4-28P-201ENST00000364739 ABCG2Q9UNQ0 655 aa3.14□□□□□ -1.91
RNU4-28P-201ENST00000364739 DIMT1Q9UNQ2 313 aaKnown RBP3.14□□□□□ -1.91
RNU4-28P-201ENST00000364739 LRRK1Q38SD2 2015 aa3.14□□□□□ -1.91
RNU4-28P-201ENST00000364739 IGKV6D-21A0A0A0MT36 114 aa3.13□□□□□ -1.91
RNU4-28P-201ENST00000364739 A8MX80 341 aa3.13□□□□□ -1.91
RNU4-28P-201ENST00000364739 HDAC3O15379 428 aa3.13□□□□□ -1.91
RNU4-28P-201ENST00000364739 GPAA1O43292 621 aa3.13□□□□□ -1.91
RNU4-28P-201ENST00000364739 VCLP18206 1134 aa3.13□□□□□ -1.91
RNU4-28P-201ENST00000364739 IL2RGP31785 369 aa3.13□□□□□ -1.91
RNU4-28P-201ENST00000364739 HERV-K104P63124 156 aa3.13□□□□□ -1.91
RNU4-28P-201ENST00000364739 MSLNQ13421 630 aaPredicted RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms