RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 LMLNQ96KR4 655 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 SLC22A12Q96S37 553 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 CSNK1G3Q9Y6M4 447 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 SCN2BO60939 215 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 SRCP12931 536 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 DNASE1P24855 282 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 PCGF2P35227 344 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 ZNF91Q05481 1191 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 NTRK2Q16620 822 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 MEDAGQ5VYS4 303 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 SLC25A25Q6KCM7 469 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 ANKRD54Q6NXT1 300 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 OLIG3Q7RTU3 272 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 ZNF438Q7Z4V0 828 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 TMEM25Q86YD3 366 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 LILRA3Q8N6C8 439 aaPredicted RBP13.24□□□□□ -0.29
COL6A1-201ENST00000361866 ADAMTS16Q8TE57 1224 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 FAM46AQ96IP4 442 aaKnown RBP13.24□□□□□ -0.29
COL6A1-201ENST00000361866 TRIB3Q96RU7 358 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 MACROD1Q9BQ69 325 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 NDC1Q9BTX1 674 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 MRPS30Q9NP92 439 aaKnown RBP13.24□□□□□ -0.29
COL6A1-201ENST00000361866 PCDHGA6Q9Y5G7 932 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 FKBP7Q9Y680 259 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 CSN2P05814 226 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 ZNF30P17039 623 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 ATF6P18850 670 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 CEACAM19Q7Z692 300 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 YIPF7Q8N8F6 280 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 GALNT6Q8NCL4 622 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 SRFBP1Q8NEF9 429 aaKnown RBP13.24□□□□□ -0.29
COL6A1-201ENST00000361866 BEST4Q8NFU0 473 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 OR14C36Q8NHC7 312 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.24□□□□□ -0.29
COL6A1-201ENST00000361866 RERGQ96A58 199 aaPredicted RBP13.24□□□□□ -0.29
COL6A1-201ENST00000361866 PDLIM5Q96HC4 596 aaKnown RBP13.24□□□□□ -0.29
COL6A1-201ENST00000361866 RIPOR3Q96MK2 946 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 SLC6A16Q9GZN6 736 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 GPN1Q9HCN4 374 aaPredicted RBP13.24□□□□□ -0.29
COL6A1-201ENST00000361866 PHPT1Q9NRX4 125 aaPredicted RBP13.24□□□□□ -0.29
COL6A1-201ENST00000361866 INIPQ9NRY2 104 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 AKAP7Q9P0M2 348 aaPredicted RBP13.24□□□□□ -0.29
COL6A1-201ENST00000361866 ZNF69Q9UC07 566 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 POLR1DQ9Y2S0 133 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 LATO43561 262 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 HIST1H2ABP04908 130 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 ITPKBP27987 946 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 NUP62P37198 522 aaPredicted RBP13.24□□□□□ -0.29
COL6A1-201ENST00000361866 HIST3H2AQ7L7L0 130 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 GJD3Q8N144 294 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 ZNF740Q8NDX6 193 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 HIST1H2ACQ93077 130 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 SLC35B4Q969S0 331 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 BHLHE41Q9C0J9 482 aaPredicted RBP13.24□□□□□ -0.29
COL6A1-201ENST00000361866 NUDT15Q9NV35 164 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 TBC1D24Q9ULP9 559 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 TRBV4-1A0A0J9YWV2 114 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 TMEM221A6NGB7 291 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 FAM183AA6NL82 134 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 TTC34A8MYJ7 566 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 HPGDSO60760 199 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 MPC1LP0DKB6 136 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 TGM4P49221 684 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 MCCD1P59942 119 aaPredicted RBP13.23□□□□□ -0.29
COL6A1-201ENST00000361866 DEFA5Q01523 94 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 ZNF155Q12901 538 aaPredicted RBP13.23□□□□□ -0.29
COL6A1-201ENST00000361866 NDUFA9Q16795 377 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 SFRP4Q6FHJ7 346 aaPredicted RBP13.23□□□□□ -0.29
COL6A1-201ENST00000361866 USP51Q70EK9 711 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 TRIM46Q7Z4K8 759 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 ASB11Q8WXH4 323 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 NKD1Q969G9 470 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 TTLL2Q9BWV7 592 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 CACNG6Q9BXT2 260 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 CALML5Q9NZT1 146 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 NDUFAF4Q9P032 175 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 SLC27A6Q9Y2P4 619 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 WDR45Q9Y484 360 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 ZNF860A6NHJ4 632 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 SMLR1H3BR10 107 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 GPR37L1O60883 481 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 NCR1O76036 304 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 ACRP10323 421 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 ACADMP11310 421 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 HSD3B1P14060 373 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 HSD3B2P26439 372 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 BTN3A2P78410 334 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 PRKCDQ05655 676 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 TRAM2Q15035 370 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 CYHR1Q6ZMK1 362 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 OR51L1Q8NGJ5 315 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 OR8K3Q8NH51 312 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 OR5P2Q8WZ92 322 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 ECHDC3Q96DC8 303 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 CD180Q99467 661 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 L7N2F9 121 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 HK1P19367 917 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 OLFML2AQ68BL7 652 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 ZNF852Q6ZMS4 543 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 DNAJA3Q96EY1 480 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms