RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 CHRDQ9H2X0 955 aa7.71□□□□□ -1.18
HTT-201ENST00000355072 OR51J1Q9H342 316 aa7.71□□□□□ -1.18
HTT-201ENST00000355072 ANGPTL7O43827 346 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 NTSR2O95665 410 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 CD34P28906 385 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 ALDH3B1P43353 468 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 ZNF133P52736 654 aaPredicted RBP7.7□□□□□ -1.18
HTT-201ENST00000355072 ARHGAP19Q14CB8 494 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 MED1Q15648 1581 aaPredicted RBP7.7□□□□□ -1.18
HTT-201ENST00000355072 TOR1AIP1Q5JTV8 583 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 HBMQ6B0K9 141 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 MCEMP1Q8IX19 187 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 OR7G3Q8NG95 312 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 CMKLR1Q99788 373 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 PRODH2Q9UF12 536 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 FTCDNL1E5RQL4 147 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 ACSF2Q96CM8 615 aaPredicted RBP7.7□□□□□ -1.18
HTT-201ENST00000355072 FAM46AQ96IP4 442 aaKnown RBP7.7□□□□□ -1.18
HTT-201ENST00000355072 POP1Q99575 1024 aaKnown RBP7.7□□□□□ -1.18
HTT-201ENST00000355072 FN3KRPQ9HA64 309 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 PNPOQ9NVS9 261 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 FAM96BQ9Y3D0 163 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 CPQQ9Y646 472 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 KIAA0513O60268 411 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 LRATO95237 230 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 UBL4AP11441 157 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 HLA-DMAP28067 261 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 VIPR1P32241 457 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 NUMBP49757 651 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 DPPA2Q7Z7J5 298 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 TRMT10AQ8TBZ6 339 aaKnown RBP7.7□□□□□ -1.18
HTT-201ENST00000355072 TM9SF4Q92544 642 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 ANKRD19PQ9H560 264 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 ZMAT5Q9UDW3 170 aaKnown RBP7.7□□□□□ -1.18
HTT-201ENST00000355072 LACTBL1A8MY62 500 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 E9PI62 339 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 KIAA0355O15063 1070 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 CSNK2A2P19784 350 aaPredicted RBP7.7□□□□□ -1.18
HTT-201ENST00000355072 CDH8P55286 799 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 PPIGQ13427 754 aaKnown RBP eCLIP7.7□□□□□ -1.186e-7■■□□□ 13.7
HTT-201ENST00000355072 CDC42EP5Q6NZY7 148 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 C2CD4AQ8NCU7 369 aaPredicted RBP7.7□□□□□ -1.18
HTT-201ENST00000355072 ACSL6Q9UKU0 697 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 PCDHB10Q9UN67 800 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 GABRA2P47869 451 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 MXD1Q05195 221 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 IRF5Q13568 498 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 CD276Q5ZPR3 534 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 TCTE3Q8IZS6 198 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 OR52J3Q8NH60 311 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 SLC5A7Q9GZV3 580 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 HHLA1C9JL84 531 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 SOX15O60248 233 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 MPSTP25325 297 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 FMO3P31513 532 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 SSTR3P32745 418 aaPredicted RBP7.7□□□□□ -1.18
HTT-201ENST00000355072 CACUL1Q86Y37 369 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 SYNE4Q8N205 404 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 OR52E4Q8NGH9 312 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.7□□□□□ -1.18
HTT-201ENST00000355072 NSMAFQ92636 917 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 HAS1Q92839 578 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 FCRL3Q96P31 734 aaPredicted RBP7.7□□□□□ -1.18
HTT-201ENST00000355072 GPR88Q9GZN0 384 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 CD300AQ9UGN4 299 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 MAP4K5Q9Y4K4 846 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 KPTNQ9Y664 436 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 ACPPP15309 386 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 ETV4P43268 484 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 SLC30A7Q8NEW0 376 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 RTP4Q96DX8 246 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 PPIL3Q9H2H8 161 aaKnown RBP7.7□□□□□ -1.18
HTT-201ENST00000355072 AIG1Q9NVV5 245 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 TSTQ16762 297 aaKnown RBP7.7□□□□□ -1.18
HTT-201ENST00000355072 LIPKQ5VXJ0 399 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 MTFR2Q6P444 385 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 ZC3H14Q6PJT7 736 aaKnown RBP7.7□□□□□ -1.18
HTT-201ENST00000355072 FNDC9Q8TBE3 224 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 TRAPPC12Q8WVT3 735 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 CHRDL1Q9BU40 450 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 GATA5Q9BWX5 397 aaPredicted RBP7.7□□□□□ -1.18
HTT-201ENST00000355072 B3GNT5Q9BYG0 378 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 K7EQM0 130 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 TLR5O60602 858 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 RIDAP52758 137 aaKnown RBP7.7□□□□□ -1.18
HTT-201ENST00000355072 SCAND1P57086 179 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 SF3B4Q15427 424 aaKnown RBP eCLIP7.7□□□□□ -1.187e-7■■■■■ 27.6
HTT-201ENST00000355072 KRBOX4Q5JUW0 171 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 PLAG1Q6DJT9 500 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 C15orf54Q8N8G6 183 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 ZNF461Q8TAF7 563 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 CYP8B1Q9UNU6 501 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 COL2A1P02458 1487 aaPredicted RBP7.7□□□□□ -1.18
HTT-201ENST00000355072 A8MUI8 341 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 PCDH7O60245 1069 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 SLC43A1O75387 559 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 UPP2O95045 317 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 ADRB3P13945 408 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 CSF2RAP15509 400 aa7.7□□□□□ -1.18
HTT-201ENST00000355072 BDKRB2P30411 391 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms