RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 APOHP02749 345 aaPredicted RBP1.45□□□□□ -2.18
BRCA1-202ENST00000354071 VTNP04004 478 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 UMODP07911 640 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 ADORA3P0DMS8 318 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 RPS2P15880 293 aaKnown RBP1.45□□□□□ -2.18
BRCA1-202ENST00000354071 CYP3A5P20815 502 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 ACKR3P25106 362 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 HTR5AP47898 357 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 POU3F4P49335 361 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 LINC01620Q4KN68 170 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 C20orf194Q5TEA3 1177 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 TTC23Q5W5X9 447 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 ARHGAP17Q68EM7 881 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 RTL6Q6ICC9 239 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 NEPROQ6NW34 567 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF852Q6ZMS4 543 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 C19orf35Q6ZS72 473 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 Q71RC1 249 aaPredicted RBP1.45□□□□□ -2.18
BRCA1-202ENST00000354071 DPY19L4Q7Z388 723 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF554Q86TJ5 538 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 OR6C4Q8NGE1 309 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 FCAMRQ8WWV6 532 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 NEUROG1Q92886 237 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 RPGRIP1Q96KN7 1286 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 SGK494Q96LW2 274 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 GUCD1Q96NT3 240 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 OR1F2PQ96R84 312 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 OVOL2Q9BRP0 275 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 NMNAT2Q9BZQ4 307 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 POLR1EQ9GZS1 481 aaKnown RBP1.45□□□□□ -2.18
BRCA1-202ENST00000354071 ADGRL4Q9HBW9 690 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 HPS4Q9NQG7 708 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 GLRX2Q9NS18 164 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 AGPAT5Q9NUQ2 364 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 RAI14Q9P0K7 980 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 BAIAP2L1Q9UHR4 511 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 CTNNA3Q9UI47 895 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 MEMO1Q9Y316 297 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 RAD54L2Q9Y4B4 1467 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 ABCA2Q9BZC7 2435 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 PAPPA2Q9BXP8 1791 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 ERVK-7P63135 1459 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 A0A1W2PR80 420 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 WDR91A4D1P6 747 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 NPIPA2E9PIF3 369 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 DVL1O14640 695 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 IMPA2O14732 288 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 SCO2O43819 266 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 NME2P1O60361 137 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 SFTPCP11686 197 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 RFC2P35250 354 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 SRSF4Q08170 494 aaKnown RBP1.45□□□□□ -2.18
BRCA1-202ENST00000354071 BST1Q10588 318 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 SLC10A2Q12908 348 aaPredicted RBP1.45□□□□□ -2.18
BRCA1-202ENST00000354071 ITPK1Q13572 414 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 CALCRLQ16602 461 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 DUSP5Q16690 384 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 GGTA1PQ4G0N0 100 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 IL23RQ5VWK5 629 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF776Q68DI1 518 aaPredicted RBP1.45□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF549Q6P9A3 640 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 CACUL1Q86Y37 369 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 VSTM4Q8IW00 320 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 ARFGAP2Q8N6H7 521 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 OR5M9Q8NGP3 310 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 BRSK1Q8TDC3 778 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF486Q96H40 463 aaPredicted RBP1.45□□□□□ -2.18
BRCA1-202ENST00000354071 ACCSQ96QU6 501 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 PCDHB18PQ96TA0 734 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 NPAS2Q99743 824 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 SSX3Q99909 188 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 CITED1Q99966 193 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 RPP25Q9BUL9 199 aaKnown RBP1.45□□□□□ -2.18
BRCA1-202ENST00000354071 KAT8Q9H7Z6 458 aaKnown RBP1.45□□□□□ -2.18
BRCA1-202ENST00000354071 WDR76Q9H967 626 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 ELOVL3Q9HB03 270 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 INTS9Q9NV88 658 aaKnown RBP1.45□□□□□ -2.18
BRCA1-202ENST00000354071 PISDQ9UG56 409 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF346Q9UL40 294 aaKnown RBP1.45□□□□□ -2.18
BRCA1-202ENST00000354071 NAP1L2Q9ULW6 460 aaPredicted RBP1.45□□□□□ -2.18
BRCA1-202ENST00000354071 MYO6Q9UM54 1294 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 LRP12Q9Y561 859 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 CRB1P82279 1406 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 BTBD17A6NE02 478 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 GOLGA6L9A6NEM1 432 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 TMEM191CA6NGB0 347 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 A8MVM7 634 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 PRR32B1ATL7 298 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 C2CD4DB7Z1M9 353 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 H3BNX3 289 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 MAPK13O15264 365 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 RNASEH1O60930 286 aaKnown RBP1.45□□□□□ -2.18
BRCA1-202ENST00000354071 GPIP06744 558 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 GLRA1P23415 457 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 CERS1P27544 350 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 ACADSBP45954 432 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 HLCSP50747 726 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 PPIAP62937 165 aaKnown RBP1.45□□□□□ -2.18
BRCA1-202ENST00000354071 ITGA9Q13797 1035 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 C3AR1Q16581 482 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms