RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 PEX16Q9Y5Y5 336 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 POLR1CO15160 346 aaPredicted RBP14.18□□□□□ -0.14
COL17A1-201ENST00000353479 AHCYL1O43865 530 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 GPR37L1O60883 481 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 DBIP07108 87 aaKnown RBP14.18□□□□□ -0.14
COL17A1-201ENST00000353479 CHAF1BQ13112 559 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 RCAN2Q14206 197 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 ENPP6Q6UWR7 440 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 MSANTD1Q6ZTZ1 278 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 GALNTL5Q7Z4T8 443 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 ARHGAP22Q7Z5H3 698 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 TMEM151BQ8IW70 566 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 WBP2Q969T9 261 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 ELSPBP1Q96BH3 223 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 TM9SF2Q99805 663 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 ORAI3Q9BRQ5 295 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 DUSP23Q9BVJ7 150 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 HDAC8Q9BY41 377 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 HTRA2O43464 458 aaPredicted RBP14.17□□□□□ -0.14
COL17A1-201ENST00000353479 CCNOP22674 350 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 MMP12P39900 470 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 CLRN1P58418 232 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 SMU1Q2TAY7 513 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 SHISA6Q6ZSJ9 500 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 MARCH9Q86YJ5 346 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 ACOT4Q8N9L9 421 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 OR6C4Q8NGE1 309 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 DIO2Q92813 273 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 ACTRT3Q9BYD9 372 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 CUEDC1Q9NWM3 386 aaPredicted RBP14.17□□□□□ -0.14
COL17A1-201ENST00000353479 ITGA10O75578 1167 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 SYNGR4O95473 234 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 C8BP07358 591 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 SDC1P18827 310 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 TSTQ16762 297 aaKnown RBP14.17□□□□□ -0.14
COL17A1-201ENST00000353479 COQ5Q5HYK3 327 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 RAET1LQ5VY80 246 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 C1orf94Q6P1W5 598 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 KCNN1Q92952 543 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 OR1F2PQ96R84 312 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 TRIM36Q9NQ86 728 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 SDR39U1Q9NRG7 319 aaPredicted RBP14.17□□□□□ -0.14
COL17A1-201ENST00000353479 A0A1W2PPL8 197 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 PRAMEF2O60811 474 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 PGCP20142 388 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 ENDOUP21128 410 aaKnown RBP14.17□□□□□ -0.14
COL17A1-201ENST00000353479 GAL3ST3Q96A11 431 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 C1QTNF1Q9BXJ1 281 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 ZNF717Q9BY31 904 aaPredicted RBP14.17□□□□□ -0.14
COL17A1-201ENST00000353479 YTHDF1Q9BYJ9 559 aaKnown RBP14.17□□□□□ -0.14
COL17A1-201ENST00000353479 UNC119BA6NIH7 251 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 WASHC1A8K0Z3 465 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 MC3RP41968 323 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 CLCN2P51788 898 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 YPEL5P62699 121 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 WASH2PQ6VEQ5 465 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 ZFP3Q96NJ6 502 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 ERMAPQ96PL5 475 aaPredicted RBP14.17□□□□□ -0.14
COL17A1-201ENST00000353479 CRB3Q9BUF7 120 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 NAALAD2Q9Y3Q0 740 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 NOX1Q9Y5S8 564 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 FKBP7Q9Y680 259 aa14.17□□□□□ -0.14
COL17A1-201ENST00000353479 RBMXL2O75526 392 aaKnown RBP14.16□□□□□ -0.14
COL17A1-201ENST00000353479 SOX30O94993 753 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 CER1O95813 267 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 GDI2P50395 445 aaKnown RBP14.16□□□□□ -0.14
COL17A1-201ENST00000353479 RORCP51449 518 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 WSCD2Q2TBF2 565 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 PLET1Q6UQ28 207 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 VTCN1Q7Z7D3 282 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 NAGSQ8N159 534 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 RNF175Q8N4F7 328 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 PJA1Q8NG27 643 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 KCTD7Q96MP8 289 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 B4GALT7Q9UBV7 327 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 COL5A3P25940 1745 aaPredicted RBP14.16□□□□□ -0.14
COL17A1-201ENST00000353479 MRPL3P09001 348 aaKnown RBP14.16□□□□□ -0.14
COL17A1-201ENST00000353479 DDCP20711 480 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 GABRB3P28472 473 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 CRYZQ08257 329 aaKnown RBP14.16□□□□□ -0.14
COL17A1-201ENST00000353479 TUBB3Q13509 450 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 PAGE3Q5JUK9 113 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 UBQLNLQ8IYU4 475 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 EID2Q8N6I1 236 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 CREB3L4Q8TEY5 395 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 KLHL18O94889 574 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 SNAP29O95721 258 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 GGT1P19440 569 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 OR2B6P58173 313 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 RPS26P11Q5JNZ5 115 aaPredicted RBP14.16□□□□□ -0.14
COL17A1-201ENST00000353479 MEIOBQ8N635 442 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 OR5K2Q8NHB8 316 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 TMEM80Q96HE8 168 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 ITPAQ9BY32 194 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 KCMF1Q9P0J7 381 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 LAMP5Q9UJQ1 280 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 NPIPA2E9PIF3 369 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 NPIPA3F8WFD2 350 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 GPR143P51810 404 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 HSF2Q03933 536 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms