RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 CMTM7Q96FZ5 175 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 VPS50Q96JG6 964 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 KCNA7Q96RP8 456 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 CCT7Q99832 543 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 TBCDQ9BTW9 1192 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 NTMT1Q9BV86 223 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 RNF32Q9H0A6 362 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 TUBB1Q9H4B7 451 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 CDCP1Q9H5V8 836 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 PFDN4Q9NQP4 134 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 BAIAP2L1Q9UHR4 511 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 PPIEQ9UNP9 301 aaKnown RBP14.97□□□□□ -0.01
RAB5C-201ENST00000346213 ASB4Q9Y574 426 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 USP9YO00507 2555 aaPredicted RBP14.97□□□□□ -0.01
RAB5C-201ENST00000346213 A0A1W2PR48 441 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 CLDN9O95484 217 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 DDAH2O95865 285 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 CHEK2O96017 543 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 NR0B1P51843 470 aaKnown RBP14.97□□□□□ -0.01
RAB5C-201ENST00000346213 HSD17B7P56937 341 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 IRX1P78414 480 aaPredicted RBP14.97□□□□□ -0.01
RAB5C-201ENST00000346213 SLAMF1Q13291 335 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 CYLC2Q14093 348 aaPredicted RBP14.97□□□□□ -0.01
RAB5C-201ENST00000346213 SNCBQ16143 134 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 TMEM35AQ53FP2 167 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 SWT1Q5T5J6 900 aaKnown RBP14.97□□□□□ -0.01
RAB5C-201ENST00000346213 HOMEZQ8IX15 550 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 EFCAB3Q8N7B9 438 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 NCLNQ969V3 563 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 MARK4Q96L34 752 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 SLX1AQ9BQ83 275 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 MRPL1Q9BYD6 325 aaKnown RBP14.97□□□□□ -0.01
RAB5C-201ENST00000346213 AKTIPQ9H8T0 292 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 LYRM4Q9HD34 91 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 TEX10Q9NXF1 929 aaPredicted RBP14.97□□□□□ -0.01
RAB5C-201ENST00000346213 CNTRLQ7Z7A1 2325 aa14.96□□□□□ -0.01
RAB5C-201ENST00000346213 TRBV11-1A0A0K0K1C0 115 aa14.96□□□□□ -0.01
RAB5C-201ENST00000346213 GLOD5A6NK44 160 aa14.96□□□□□ -0.01
RAB5C-201ENST00000346213 GABRR3A8MPY1 467 aa14.96□□□□□ -0.01
RAB5C-201ENST00000346213 ZNHIT1O43257 154 aa14.96□□□□□ -0.01
RAB5C-201ENST00000346213 UGDHO60701 494 aa14.96□□□□□ -0.01
RAB5C-201ENST00000346213 OR4F21O95013 312 aa14.96□□□□□ -0.01
RAB5C-201ENST00000346213 ICAM2P13598 275 aa14.96□□□□□ -0.01
RAB5C-201ENST00000346213 SKP1P63208 163 aa14.96□□□□□ -0.01
RAB5C-201ENST00000346213 IGLV3-21P80748 117 aaPredicted RBP14.96□□□□□ -0.01
RAB5C-201ENST00000346213 SLC25A3Q00325 362 aa14.96□□□□□ -0.01
RAB5C-201ENST00000346213 SLC13A2Q13183 592 aa14.96□□□□□ -0.01
RAB5C-201ENST00000346213 CUL3Q13618 768 aa14.96□□□□□ -0.01
RAB5C-201ENST00000346213 ABHD17BQ5VST6 288 aa14.96□□□□□ -0.01
RAB5C-201ENST00000346213 HIST2H2BCQ6DN03 193 aa14.96□□□□□ -0.01
RAB5C-201ENST00000346213 SNX32Q86XE0 403 aa14.96□□□□□ -0.01
RAB5C-201ENST00000346213 ZNF595Q8IYB9 648 aa14.96□□□□□ -0.01
RAB5C-201ENST00000346213 ARMC10Q8N2F6 343 aa14.96□□□□□ -0.01
RAB5C-201ENST00000346213 B3GNT7Q8NFL0 401 aa14.96□□□□□ -0.01
RAB5C-201ENST00000346213 COPS7BQ9H9Q2 264 aaPredicted RBP14.96□□□□□ -0.01
RAB5C-201ENST00000346213 VPS4AQ9UN37 437 aa14.96□□□□□ -0.01
RAB5C-201ENST00000346213 ATP6AP2A0A1C7CYW4 349 aa14.95□□□□□ -0.02
RAB5C-201ENST00000346213 ATP6AP2O75787 350 aa14.95□□□□□ -0.02
RAB5C-201ENST00000346213 OTCP00480 354 aa14.95□□□□□ -0.02
RAB5C-201ENST00000346213 LBPP18428 481 aa14.95□□□□□ -0.02
RAB5C-201ENST00000346213 CCNG1P51959 295 aa14.95□□□□□ -0.02
RAB5C-201ENST00000346213 MLF1P58340 268 aa14.95□□□□□ -0.02
RAB5C-201ENST00000346213 MAPRE2Q15555 327 aa14.95□□□□□ -0.02
RAB5C-201ENST00000346213 GGTA1PQ4G0N0 100 aa14.95□□□□□ -0.02
RAB5C-201ENST00000346213 SGO1Q5FBB7 561 aa14.95□□□□□ -0.02
RAB5C-201ENST00000346213 RNFT1Q5M7Z0 435 aa14.95□□□□□ -0.02
RAB5C-201ENST00000346213 DDIASQ8IXT1 998 aa14.95□□□□□ -0.02
RAB5C-201ENST00000346213 FAR1Q8WVX9 515 aa14.95□□□□□ -0.02
RAB5C-201ENST00000346213 UBE2E3Q969T4 207 aa14.95□□□□□ -0.02
RAB5C-201ENST00000346213 PPWD1Q96BP3 646 aaKnown RBP14.95□□□□□ -0.02
RAB5C-201ENST00000346213 THTPAQ9BU02 230 aa14.95□□□□□ -0.02
RAB5C-201ENST00000346213 ALOXE3Q9BYJ1 711 aa14.95□□□□□ -0.02
RAB5C-201ENST00000346213 DENND2DQ9H6A0 471 aaPredicted RBP14.95□□□□□ -0.02
RAB5C-201ENST00000346213 TIMM22Q9Y584 194 aa14.95□□□□□ -0.02
RAB5C-201ENST00000346213 PCDHGA11Q9Y5H2 935 aa14.95□□□□□ -0.02
RAB5C-201ENST00000346213 DYTNA2CJ06 578 aa14.94□□□□□ -0.02
RAB5C-201ENST00000346213 FOXE1O00358 373 aaPredicted RBP14.94□□□□□ -0.02
RAB5C-201ENST00000346213 CTNSO60931 367 aa14.94□□□□□ -0.02
RAB5C-201ENST00000346213 AIFM1O95831 613 aa14.94□□□□□ -0.02
RAB5C-201ENST00000346213 PDYNP01213 254 aa14.94□□□□□ -0.02
RAB5C-201ENST00000346213 CLPSP04118 112 aa14.94□□□□□ -0.02
RAB5C-201ENST00000346213 SOX18P35713 384 aa14.94□□□□□ -0.02
RAB5C-201ENST00000346213 TNFRSF17Q02223 184 aa14.94□□□□□ -0.02
RAB5C-201ENST00000346213 TBL3Q12788 808 aaKnown RBP14.94□□□□□ -0.02
RAB5C-201ENST00000346213 ZNF750Q32MQ0 723 aa14.94□□□□□ -0.02
RAB5C-201ENST00000346213 XKR7Q5GH72 579 aa14.94□□□□□ -0.02
RAB5C-201ENST00000346213 FRG2Q64ET8 278 aa14.94□□□□□ -0.02
RAB5C-201ENST00000346213 OGFOD2Q6N063 350 aa14.94□□□□□ -0.02
RAB5C-201ENST00000346213 RPUSD3Q6P087 351 aaKnown RBP14.94□□□□□ -0.02
RAB5C-201ENST00000346213 ATCAYQ86WG3 371 aa14.94□□□□□ -0.02
RAB5C-201ENST00000346213 ZCCHC7Q8N3Z6 543 aaKnown RBP14.94□□□□□ -0.02
RAB5C-201ENST00000346213 SCMH1Q96GD3 660 aa14.94□□□□□ -0.02
RAB5C-201ENST00000346213 FRG2BQ96QU4 278 aa14.94□□□□□ -0.02
RAB5C-201ENST00000346213 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.94□□□□□ -0.02
RAB5C-201ENST00000346213 DDX31Q9H8H2 851 aaKnown RBP14.94□□□□□ -0.02
RAB5C-201ENST00000346213 KLHL1Q9NR64 748 aa14.94□□□□□ -0.02
RAB5C-201ENST00000346213 ERRFI1Q9UJM3 462 aaPredicted RBP14.94□□□□□ -0.02
RAB5C-201ENST00000346213 PTGDR2Q9Y5Y4 395 aa14.94□□□□□ -0.02
RAB5C-201ENST00000346213 DOPEY2Q9Y3R5 2298 aa14.94□□□□□ -0.02
RAB5C-201ENST00000346213 A0A088AWK7 358 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms