RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 COX18Q8N8Q8 333 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 P2RY12Q9H244 342 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 DUSP21Q9H596 190 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 NEUROD4Q9HD90 331 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 PHPT1Q9NRX4 125 aaPredicted RBP11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 LOC105369274A0A096LPK9 316 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 GPR37L1O60883 481 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 MPC1LP0DKB6 136 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 PTPN2P17706 415 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 C4BPBP20851 252 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 PSMB5P28074 263 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 ACSL1P33121 698 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 USP51Q70EK9 711 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 SLC30A8Q8IWU4 369 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 MSRB3Q8IXL7 192 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 OR4N4Q8N0Y3 316 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 CYB561A3Q8NBI2 242 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 DYNC2LI1Q8TCX1 351 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 HRASLS5Q96KN8 279 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 RIPOR3Q96MK2 946 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 FYTTD1Q96QD9 318 aaKnown RBP11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 EPYCQ99645 322 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 GINS4Q9BRT9 223 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 GSDMCQ9BYG8 508 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 RDH14Q9HBH5 336 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 IRGMA1A4Y4 181 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 LHCGRP22888 699 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 APEX1P27695 318 aaKnown RBP11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 PYCR1P32322 319 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 PCGF2P35227 344 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 ZNF91Q05481 1191 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 MBTPS1Q14703 1052 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 BCL2L15Q5TBC7 163 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 CNIH2Q6PI25 160 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 NXPE4Q6UWF7 544 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 IL20RBQ6UXL0 311 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 COMMD2Q86X83 199 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 ECHDC3Q96DC8 303 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 TMEM27Q9HBJ8 222 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 ZNF334Q9HCZ1 680 aaPredicted RBP11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 SIRT5Q9NXA8 310 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 DPP7Q9UHL4 492 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 TMEFF2Q9UIK5 374 aaPredicted RBP11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 TRIP12Q14669 1992 aaPredicted RBP11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 METTL15A6NJ78 407 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 WASH3PC4AMC7 463 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 SMLR1H3BR10 107 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 PROM1O43490 865 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 KLHL18O94889 574 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 C1QCP02747 245 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 ITPKBP27987 946 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 CAPZA2P47755 286 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 GCGRP47871 477 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 ST3GAL3Q11203 375 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 RPA4Q13156 261 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 ADAM15Q13444 863 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 TRIM71Q2Q1W2 868 aaKnown RBP11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 ATAD3CQ5T2N8 411 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 GRHL2Q6ISB3 625 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 VITQ6UXI7 678 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 RTL4Q6ZR62 310 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 GDPD3Q7L5L3 318 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 GALNT13Q8IUC8 556 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 RBCK1Q9BYM8 510 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 TTYH1Q9H313 450 aaPredicted RBP11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 PDFQ9HBH1 243 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 FAM47E-STBD1D6RA91 191 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 SCN2BO60939 215 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 HOXD8P13378 290 aaPredicted RBP11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 CBLBQ13191 982 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 ZMYND11Q15326 602 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 NNATQ16517 81 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 SLC36A4Q6YBV0 504 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 RASGEF1AQ8N9B8 481 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 BEST4Q8NFU0 473 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 OR8K3Q8NH51 312 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 C1orf216Q8TAB5 229 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 ASB15Q8WXK1 588 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 RERGQ96A58 199 aaPredicted RBP11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 RNF31Q96EP0 1072 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 BHLHE41Q9C0J9 482 aaPredicted RBP11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 INIPQ9NRY2 104 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 WDR45Q9Y484 360 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 PCDHGA4Q9Y5G9 962 aa11.82□□□□□ -0.52
SNRNP48-201ENST00000342415 POLR2AP24928 1970 aaKnown RBP11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 FAAHO00519 579 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 CR2P20023 1033 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 RPS19P39019 145 aaKnown RBP11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 SLAMF1Q13291 335 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 ZNF805Q5CZA5 627 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 PHC2Q8IXK0 858 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 BBS10Q8TAM1 723 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 TNFAIP8L1Q8WVP5 186 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 SNAPC3Q92966 411 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 CNDP2Q96KP4 475 aaKnown RBP11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 PDCD10Q9BUL8 212 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 PPIL3Q9H2H8 161 aaKnown RBP11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 PPIEQ9UNP9 301 aaKnown RBP11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 ERVW-1Q9UQF0 538 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms