RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 BTBD17A6NE02 478 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 DCLK1O15075 740 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 LDLRAD4O15165 306 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 NARSO43776 548 aaKnown RBP9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 SCELO95171 688 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 FABP3P05413 133 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 MMP10P09238 476 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 HMGB2P26583 209 aaKnown RBP9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 VEGFCP49767 419 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 SNRPFP62306 86 aaKnown RBP9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 PITX1P78337 314 aaPredicted RBP9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 RBBP7Q16576 425 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 HYAL4Q2M3T9 481 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 FAM76BQ5HYJ3 339 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 KDF1Q8NAX2 398 aaPredicted RBP9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 ZNF511Q8NB15 262 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 UXS1Q8NBZ7 420 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 OR9A2Q8NGT5 310 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 GCDHQ92947 438 aaPredicted RBP9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 TMEM41AQ96HV5 264 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 DPH2Q9BQC3 489 aaPredicted RBP9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 REEP4Q9H6H4 257 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 BRD9Q9H8M2 597 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 C11orf16Q9NQ32 467 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 MED9Q9NWA0 146 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 MED11Q9P086 117 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 AKAP7Q9P0M2 348 aaPredicted RBP9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 EPHA6Q9UF33 1036 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 TCEAL9Q9UHQ7 104 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 ZNF225Q9UK10 706 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 ASB1Q9Y576 335 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 PTCH2Q9Y6C5 1203 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 SHISA3A0PJX4 238 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 C1orf196B1AJZ1 125 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 SUPT3HB4E1H0 165 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 RTCAO00442 366 aaKnown RBP9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 PPEF2O14830 753 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 ANXA9O76027 345 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 PAK4O96013 591 aaPredicted RBP9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 HPP00738 406 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 SERPINA3P01011 423 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 SNRPCP09234 159 aaKnown RBP9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 SPI1P17947 270 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 CD53P19397 219 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 ELK1P19419 428 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 ITPKAP23677 461 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 ADH6P28332 368 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 HSPA7P48741 367 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 ANXA11P50995 505 aaKnown RBP9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 RAB5BP61020 215 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 SURF1Q15526 300 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 CRTC2Q53ET0 693 aaPredicted RBP9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 ZNF730Q6ZMV8 503 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 ZNF551Q7Z340 670 aaPredicted RBP9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 PXT1Q8NFP0 134 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 DMBX1Q8NFW5 382 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 CHURC1Q8WUH1 139 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 OTULINQ96BN8 352 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 CPNE2Q96FN4 548 aaPredicted RBP9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 TSPAN17Q96FV3 270 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 HSH2DQ96JZ2 352 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 TGM7Q96PF1 710 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 PIGQQ9BRB3 760 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 SPATA5L1Q9BVQ7 753 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 ARHGAP39Q9C0H5 1083 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 POLR3FQ9H1D9 316 aaPredicted RBP9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 NT5DC2Q9H857 520 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 DZANK1Q9NVP4 752 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 TREM2Q9NZC2 230 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 FBXL21Q9UKT6 434 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 ACSL6Q9UKU0 697 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 CA5BQ9Y2D0 317 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 SPIN1Q9Y657 262 aaPredicted RBP9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 RHPN2P1A8MT19 583 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 ZNF593O00488 134 aaPredicted RBP9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 UBE2CO00762 179 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 MID1O15344 667 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 RECQL4O94761 1208 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 ESR1P03372 595 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 DRD2P14416 443 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 FOSL2P15408 326 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 ACHEP22303 614 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 WARSP23381 471 aaKnown RBP9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 TM4SF1P30408 202 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 CD79BP40259 229 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 EVX1P49640 407 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 BCL2L1Q07817 233 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 SLC5A12Q1EHB4 618 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 GSG1Q2KHT4 349 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 HECTD2Q5U5R9 776 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 MFSD14CQ5VZR4 134 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 C18orf63Q68DL7 685 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 PRR5LQ6MZQ0 368 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 SEZ6L2Q6UXD5 910 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 PRR18Q8N4B5 295 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 METTL6Q8TCB7 284 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 TSPEARQ8WU66 669 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 ZC3H10Q96K80 434 aaKnown RBP9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 THAP7Q9BT49 309 aaPredicted RBP9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 OPN3Q9H1Y3 402 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms