RNA–Protein interactions for RNA: ENST00000332296.7

PRAMEF1-201, Transcript of PRAME family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF1, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1-201ENST00000332296 ADH1CP00326 375 aa9.54□□□□□ -0.88
PRAMEF1-201ENST00000332296 IFNW1P05000 195 aa9.54□□□□□ -0.88
PRAMEF1-201ENST00000332296 SRPRAP08240 638 aaKnown RBP9.54□□□□□ -0.88
PRAMEF1-201ENST00000332296 RHCEP18577 417 aa9.54□□□□□ -0.88
PRAMEF1-201ENST00000332296 POLR2EP19388 210 aaKnown RBP9.54□□□□□ -0.88
PRAMEF1-201ENST00000332296 GDI1P31150 447 aa9.54□□□□□ -0.88
PRAMEF1-201ENST00000332296 OLR1P78380 273 aa9.54□□□□□ -0.88
PRAMEF1-201ENST00000332296 DEPDC1Q5TB30 811 aa9.54□□□□□ -0.88
PRAMEF1-201ENST00000332296 PLAG1Q6DJT9 500 aa9.54□□□□□ -0.88
PRAMEF1-201ENST00000332296 CEACAM20Q6UY09 585 aa9.54□□□□□ -0.88
PRAMEF1-201ENST00000332296 RBM45Q8IUH3 476 aaKnown RBP9.54□□□□□ -0.88
PRAMEF1-201ENST00000332296 ADGRF3Q8IZF5 1079 aa9.54□□□□□ -0.88
PRAMEF1-201ENST00000332296 OR4D11Q8NGI4 311 aa9.54□□□□□ -0.88
PRAMEF1-201ENST00000332296 OR9A1PQ8NGU1 263 aa9.54□□□□□ -0.88
PRAMEF1-201ENST00000332296 VANGL1Q8TAA9 524 aaPredicted RBP9.54□□□□□ -0.88
PRAMEF1-201ENST00000332296 C9orf43Q8TAL5 461 aaPredicted RBP9.54□□□□□ -0.88
PRAMEF1-201ENST00000332296 RHOVQ96L33 236 aa9.54□□□□□ -0.88
PRAMEF1-201ENST00000332296 MAPKAP1Q9BPZ7 522 aa9.54□□□□□ -0.88
PRAMEF1-201ENST00000332296 C1QTNF2Q9BXJ5 285 aa9.54□□□□□ -0.88
PRAMEF1-201ENST00000332296 MIEF1Q9NQG6 463 aa9.54□□□□□ -0.88
PRAMEF1-201ENST00000332296 ERVK13-1Q9NX77 482 aa9.54□□□□□ -0.88
PRAMEF1-201ENST00000332296 EHD3Q9NZN3 535 aa9.54□□□□□ -0.88
PRAMEF1-201ENST00000332296 CNOT2Q9NZN8 540 aaKnown RBP9.54□□□□□ -0.88
PRAMEF1-201ENST00000332296 REV1Q9UBZ9 1251 aa9.54□□□□□ -0.88
PRAMEF1-201ENST00000332296 CLEC2DQ9UHP7 191 aa9.54□□□□□ -0.88
PRAMEF1-201ENST00000332296 LSM2Q9Y333 95 aaKnown RBP9.54□□□□□ -0.88
PRAMEF1-201ENST00000332296 TSC22D4Q9Y3Q8 395 aa9.54□□□□□ -0.88
PRAMEF1-201ENST00000332296 C2CD4DB7Z1M9 353 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 TLR4O00206 839 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 PLK4O00444 970 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 NFATC1O95644 943 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 ELAVL4P26378 380 aaKnown RBP9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 ETV6P41212 452 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 TGM4P49221 684 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 NFE2L1Q14494 772 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 PDGFRLQ15198 375 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 PAQR6Q6TCH4 344 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 UTS2BQ765I0 119 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 MTSS1LQ765P7 747 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 TRMT11Q7Z4G4 463 aaKnown RBP9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 C12orf40Q86WS4 652 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 ZNF547Q8IVP9 402 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 FBXO15Q8NCQ5 510 aaPredicted RBP9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 RAB8BQ92930 207 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 TMEM19Q96HH6 336 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 ACAT2Q9BWD1 397 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 BARHL1Q9BZE3 327 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 HOXD1Q9GZZ0 328 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 SLC25A19Q9HC21 320 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 CCDC177Q9NQR7 707 aaPredicted RBP9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 CLN6Q9NWW5 311 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 MARK1Q9P0L2 795 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 SNX11Q9Y5W9 270 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 MN1Q10571 1320 aaPredicted RBP9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 COL4A3Q01955 1670 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 SH3D21A4FU49 640 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 ARRDC5A6NEK1 342 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 PSMD11O00231 422 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 WWP2O00308 870 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 PLPP1O14494 284 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 CSO75390 466 aaKnown RBP9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 KRT75O95678 551 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 IFNA14P01570 189 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 UQCRC2P22695 453 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 RPL3P39023 403 aaKnown RBP9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 HTR4Q13639 388 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 SF3B4Q15427 424 aaKnown RBP eCLIP9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 ZMAT1Q5H9K5 638 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 TOR1AIP1Q5JTV8 583 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 REEP3Q6NUK4 255 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 ERAP2Q6P179 960 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 FAM83HQ6ZRV2 1179 aaPredicted RBP9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 COMTD1Q86VU5 262 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 SLC7A5P1Q8MH63 180 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 FAM46DQ8NEK8 389 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 SVIPQ8NHG7 77 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 SLC38A5Q8WUX1 472 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 DTD2Q96FN9 168 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 PDXPQ96GD0 296 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 COQ10AQ96MF6 247 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 CNPPD1Q9BV87 410 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 TRMT61BQ9BVS5 477 aaKnown RBP9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 ZNF717Q9BY31 904 aaPredicted RBP9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 NUAK2Q9H093 628 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 SMURF1Q9HCE7 757 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 EXOSC4Q9NPD3 245 aaKnown RBP9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 METRNQ9UJH8 293 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 TBC1D24Q9ULP9 559 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 CFL2Q9Y281 166 aa9.53□□□□□ -0.88
PRAMEF1-201ENST00000332296 KPNA3O00505 521 aaPredicted RBP9.52□□□□□ -0.89
PRAMEF1-201ENST00000332296 HOXC11O43248 304 aaPredicted RBP9.52□□□□□ -0.89
PRAMEF1-201ENST00000332296 ASNA1O43681 348 aa9.52□□□□□ -0.89
PRAMEF1-201ENST00000332296 CYP7B1O75881 506 aa9.52□□□□□ -0.89
PRAMEF1-201ENST00000332296 SOX6P35712 828 aa9.52□□□□□ -0.89
PRAMEF1-201ENST00000332296 RPS19P39019 145 aaKnown RBP9.52□□□□□ -0.89
PRAMEF1-201ENST00000332296 SLC6A11P48066 632 aa9.52□□□□□ -0.89
PRAMEF1-201ENST00000332296 IFITM2Q01629 132 aa9.52□□□□□ -0.89
PRAMEF1-201ENST00000332296 TFF2Q03403 129 aa9.52□□□□□ -0.89
PRAMEF1-201ENST00000332296 MESP2Q0VG99 397 aa9.52□□□□□ -0.89
PRAMEF1-201ENST00000332296 RUNX3Q13761 415 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms