RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 MANBAO00462 879 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 LCMT2O60294 686 aaKnown RBP6.76□□□□□ -1.33
SMC1A-201ENST00000322213 MBP02144 154 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 CD1DP15813 335 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 OR4D2P58180 307 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 ZNF763Q0D2J5 394 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 CBX2Q14781 532 aaPredicted RBP6.76□□□□□ -1.33
SMC1A-201ENST00000322213 RPS27LQ71UM5 84 aaKnown RBP6.76□□□□□ -1.33
SMC1A-201ENST00000322213 OR8S1Q8NH09 359 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 WDR48Q8TAF3 677 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 SORCS1Q8WY21 1168 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 ZNF419Q96HQ0 510 aaPredicted RBP6.76□□□□□ -1.33
SMC1A-201ENST00000322213 ADAM2Q99965 735 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 OARD1Q9Y530 152 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 MAFBQ9Y5Q3 323 aaPredicted RBP6.76□□□□□ -1.33
SMC1A-201ENST00000322213 A8MUA0 341 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 FAM155AB1AL88 458 aaPredicted RBP6.76□□□□□ -1.33
SMC1A-201ENST00000322213 TLR5O60602 858 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 SLC43A1O75387 559 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 CLDN11O75508 207 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 PTPN6P29350 595 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 BMP8BP34820 402 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 ETV6P41212 452 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 HMGCS1Q01581 520 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 ELAVL2Q12926 359 aaKnown RBP6.76□□□□□ -1.33
SMC1A-201ENST00000322213 ZNF574Q6ZN55 896 aaPredicted RBP6.76□□□□□ -1.33
SMC1A-201ENST00000322213 KCTD9Q7L273 389 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 BMP8AQ7Z5Y6 402 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 SERPINA9Q86WD7 417 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 KCTD12Q96CX2 325 aaKnown RBP6.76□□□□□ -1.33
SMC1A-201ENST00000322213 TBX5Q99593 518 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 OR10A4Q9H209 315 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 HEBP1Q9NRV9 189 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 RNF11Q9Y3C5 154 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 JUNP05412 331 aaKnown RBP6.76□□□□□ -1.33
SMC1A-201ENST00000322213 CDK2P24941 298 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 GNALP38405 381 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 GRM5P41594 1212 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 OR1E2P47887 323 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 CLDN10P78369 228 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 CD300CQ08708 224 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 MLLT11Q13015 90 aaPredicted RBP6.76□□□□□ -1.33
SMC1A-201ENST00000322213 GPR149Q86SP6 731 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 CCDC71Q8IV32 467 aaPredicted RBP6.76□□□□□ -1.33
SMC1A-201ENST00000322213 ZNF454Q8N9F8 522 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 CPNE2Q96FN4 548 aaPredicted RBP6.76□□□□□ -1.33
SMC1A-201ENST00000322213 PARK7Q99497 189 aaKnown RBP6.76□□□□□ -1.33
SMC1A-201ENST00000322213 SLC6A16Q9GZN6 736 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 NIT2Q9NQR4 276 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 KLK4Q9Y5K2 254 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 GSRP00390 522 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 TNFSF8P32971 234 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 OR3A2P47893 321 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 ZNF616Q08AN1 781 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 SELENBP1Q13228 472 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 ZMYND11Q15326 602 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 LARP4Q71RC2 724 aaKnown RBP eCLIP6.76□□□□□ -1.333e-11■□□□□ 8.9
SMC1A-201ENST00000322213 PXT1Q8NFP0 134 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 SLC7A13Q8TCU3 470 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 FEVQ99581 238 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 ATG5Q9H1Y0 275 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 CACNA1EQ15878 2313 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 CCL22O00626 93 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 NIPSNAP2O75323 286 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 SCGB1D2O95969 90 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 FGF4P08620 206 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 EBLN1P0CF75 366 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 NCBP2P52298 156 aaKnown RBP eCLIP6.76□□□□□ -1.33
SMC1A-201ENST00000322213 PTRH1Q86Y79 214 aaKnown RBP6.76□□□□□ -1.33
SMC1A-201ENST00000322213 CLDN22Q8N7P3 220 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 SETD7Q8WTS6 366 aaKnown RBP6.76□□□□□ -1.33
SMC1A-201ENST00000322213 TRIB3Q96RU7 358 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 PPP4R1LQ9P1A2 415 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 MED31Q9Y3C7 131 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 TIMM13Q9Y5L4 95 aaPredicted RBP6.76□□□□□ -1.33
SMC1A-201ENST00000322213 ACOT7O00154 380 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 RBBP9O75884 186 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 TSPAN15O95858 294 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 URODP06132 367 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 F7P08709 466 aaPredicted RBP6.76□□□□□ -1.33
SMC1A-201ENST00000322213 CHATP28329 748 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 ARL4DP49703 201 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 AGTR2P50052 363 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 MLLT6P55198 1093 aaPredicted RBP6.76□□□□□ -1.33
SMC1A-201ENST00000322213 C19orf57Q0VDD7 668 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 FLYWCH1Q4VC44 716 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 FAM46CQ5VWP2 391 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 SLC7A6Q92536 515 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 NDRG1Q92597 394 aaKnown RBP6.76□□□□□ -1.33
SMC1A-201ENST00000322213 CXorf40BQ96DE9 158 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 NECAB3Q96P71 396 aaPredicted RBP6.76□□□□□ -1.33
SMC1A-201ENST00000322213 DCLRE1CQ96SD1 692 aaKnown RBP6.76□□□□□ -1.33
SMC1A-201ENST00000322213 ADAMTS3O15072 1205 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 ELFN1P0C7U0 828 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 EFNA1P20827 205 aaPredicted RBP6.76□□□□□ -1.33
SMC1A-201ENST00000322213 GKP32189 559 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 MAGEA11P43364 429 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 CCR8P51685 355 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 ART1P52961 327 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 SP140Q13342 867 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms