RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 ZNF548Q8NEK5 533 aaPredicted RBP14.54□□□□□ -0.08
VARS2-201ENST00000321897 TANKQ92844 425 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 SLC6A13Q9NSD5 602 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 FOCADQ5VW36 1801 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 C2orf92A0A1B0GVN3 265 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 FAM25EA8MYX2 175 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 CBSLP0DN79 551 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 JUNBP17275 347 aaPredicted RBP14.53□□□□□ -0.08
VARS2-201ENST00000321897 ALAS2P22557 587 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 CBSP35520 551 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 RPL35P42766 123 aaKnown RBP14.53□□□□□ -0.08
VARS2-201ENST00000321897 TSPAN5P62079 268 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 HBA1P69905 142 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 CDK10Q15131 360 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 MINDY4Q4G0A6 757 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 SMUG1Q53HV7 270 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 KHDRBS2Q5VWX1 349 aaKnown RBP14.53□□□□□ -0.08
VARS2-201ENST00000321897 CPZQ66K79 652 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 TMEM179BQ7Z7N9 219 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 NUDT13Q86X67 352 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 METTL27Q8N6F8 245 aaPredicted RBP14.53□□□□□ -0.08
VARS2-201ENST00000321897 OR52L1Q8NGH7 329 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 UHRF1Q96T88 793 aaPredicted RBP14.53□□□□□ -0.08
VARS2-201ENST00000321897 C3orf14Q9HBI5 128 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 SEC14L4Q9UDX3 406 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 MLXQ9UH92 298 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 AHCTF1Q8WYP5 2266 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 CBLP22681 906 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 CCR8P51685 355 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 IFITM3Q01628 133 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 LIMS2Q7Z4I7 341 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 GALNT11Q8NCW6 608 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 BADQ92934 168 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 RERGQ96A58 199 aaPredicted RBP14.53□□□□□ -0.08
VARS2-201ENST00000321897 DOHHQ9BU89 302 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 SLC28A3Q9HAS3 691 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 SLC27A6Q9Y2P4 619 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 S100A9P06702 114 aaKnown RBP14.53□□□□□ -0.08
VARS2-201ENST00000321897 C1SP09871 688 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 DNASE1P24855 282 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 OR3A3P47888 321 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 MAP4K2Q12851 820 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 PLEKHS1Q5SXH7 462 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 CXXC5Q7LFL8 322 aaKnown RBP14.53□□□□□ -0.08
VARS2-201ENST00000321897 ZNF480Q8WV37 535 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 GEMIN6Q8WXD5 167 aaKnown RBP14.53□□□□□ -0.08
VARS2-201ENST00000321897 HERVK_113Q902F9 699 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 TRIB3Q96RU7 358 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 PRR14Q9BWN1 585 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 ZFR2Q9UPR6 939 aaKnown RBP14.53□□□□□ -0.08
VARS2-201ENST00000321897 HCN4Q9Y3Q4 1203 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 TRIOBPQ9H2D6 2365 aa14.53□□□□□ -0.08
VARS2-201ENST00000321897 FXYD6-FXYD2A0A087WZ82 144 aa14.52□□□□□ -0.08
VARS2-201ENST00000321897 CD8B2A6NJW9 211 aa14.52□□□□□ -0.08
VARS2-201ENST00000321897 PCDHGA12O60330 932 aa14.52□□□□□ -0.08
VARS2-201ENST00000321897 PRKRAO75569 313 aaKnown RBP14.52□□□□□ -0.08
VARS2-201ENST00000321897 APODP05090 189 aa14.52□□□□□ -0.08
VARS2-201ENST00000321897 CD8BP10966 210 aa14.52□□□□□ -0.08
VARS2-201ENST00000321897 ZNF30P17039 623 aa14.52□□□□□ -0.08
VARS2-201ENST00000321897 TGM1P22735 817 aa14.52□□□□□ -0.08
VARS2-201ENST00000321897 STOMP27105 288 aa14.52□□□□□ -0.08
VARS2-201ENST00000321897 IFNGR2P38484 337 aa14.52□□□□□ -0.08
VARS2-201ENST00000321897 PNLIPRP1P54315 467 aa14.52□□□□□ -0.08
VARS2-201ENST00000321897 NXNL2Q5VZ03 156 aa14.52□□□□□ -0.08
VARS2-201ENST00000321897 PGBD2Q6P3X8 592 aa14.52□□□□□ -0.08
VARS2-201ENST00000321897 GGHQ92820 318 aa14.52□□□□□ -0.08
VARS2-201ENST00000321897 FXYD6Q9H0Q3 95 aa14.52□□□□□ -0.08
VARS2-201ENST00000321897 HEBP1Q9NRV9 189 aa14.52□□□□□ -0.08
VARS2-201ENST00000321897 TM7SF3Q9NS93 570 aa14.52□□□□□ -0.08
VARS2-201ENST00000321897 UBE2QL1A1L167 161 aa14.52□□□□□ -0.08
VARS2-201ENST00000321897 METTL15A6NJ78 407 aa14.52□□□□□ -0.08
VARS2-201ENST00000321897 K7ESM1 405 aa14.52□□□□□ -0.08
VARS2-201ENST00000321897 GRIK2Q13002 908 aa14.52□□□□□ -0.08
VARS2-201ENST00000321897 GPM6BQ13491 265 aa14.52□□□□□ -0.08
VARS2-201ENST00000321897 SLC5A12Q1EHB4 618 aa14.52□□□□□ -0.08
VARS2-201ENST00000321897 DEFB134Q4QY38 66 aa14.52□□□□□ -0.08
VARS2-201ENST00000321897 B3GLCTQ6Y288 498 aa14.52□□□□□ -0.08
VARS2-201ENST00000321897 PARS2Q7L3T8 475 aaKnown RBP14.52□□□□□ -0.08
VARS2-201ENST00000321897 BCDIN3DQ7Z5W3 292 aaKnown RBP14.52□□□□□ -0.08
VARS2-201ENST00000321897 SAMD12Q8N8I0 201 aa14.52□□□□□ -0.08
VARS2-201ENST00000321897 OR2A12Q8NGT7 310 aa14.52□□□□□ -0.08
VARS2-201ENST00000321897 DYNC2LI1Q8TCX1 351 aa14.52□□□□□ -0.08
VARS2-201ENST00000321897 EID2BQ96D98 161 aa14.52□□□□□ -0.08
VARS2-201ENST00000321897 MBOAT4Q96T53 435 aa14.52□□□□□ -0.08
VARS2-201ENST00000321897 PDCD10Q9BUL8 212 aa14.52□□□□□ -0.08
VARS2-201ENST00000321897 QRSL1Q9H0R6 528 aaKnown RBP14.52□□□□□ -0.08
VARS2-201ENST00000321897 SLA2Q9H6Q3 261 aa14.52□□□□□ -0.08
VARS2-201ENST00000321897 RC3H2Q9HBD1 1191 aaKnown RBP14.52□□□□□ -0.08
VARS2-201ENST00000321897 HCN3Q9P1Z3 774 aa14.52□□□□□ -0.08
VARS2-201ENST00000321897 QSER1Q2KHR3 1735 aa14.52□□□□□ -0.09
VARS2-201ENST00000321897 HOXC11O43248 304 aaPredicted RBP14.52□□□□□ -0.09
VARS2-201ENST00000321897 HCN1O60741 890 aa14.52□□□□□ -0.09
VARS2-201ENST00000321897 KCNK2O95069 426 aa14.52□□□□□ -0.09
VARS2-201ENST00000321897 PTX3P26022 381 aaPredicted RBP14.52□□□□□ -0.09
VARS2-201ENST00000321897 ERVK-21P61565 698 aa14.52□□□□□ -0.09
VARS2-201ENST00000321897 BTN1A1Q13410 526 aa14.52□□□□□ -0.09
VARS2-201ENST00000321897 C1orf61Q13536 156 aa14.52□□□□□ -0.09
VARS2-201ENST00000321897 SPATS1Q496A3 300 aa14.52□□□□□ -0.09
VARS2-201ENST00000321897 DLEU7Q6UYE1 221 aa14.52□□□□□ -0.09
VARS2-201ENST00000321897 COMMD7Q86VX2 200 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms