RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 SLC11A2P49281 568 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 MLLT11Q13015 90 aaPredicted RBP7.36□□□□□ -1.23
CNOT4-201ENST00000315544 DNASE1L3Q13609 305 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 ZNF404Q494X3 552 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 AGAP6Q5VW22 663 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 TIGD3Q6B0B8 471 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 GLRX5Q86SX6 157 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 SVOPQ8N4V2 548 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 TMIEQ8NEW7 156 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 AGAP4Q96P64 663 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 NMNAT2Q9BZQ4 307 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 RACGAP1Q9H0H5 632 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 SLC38A1Q9H2H9 487 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 TPK1Q9H3S4 243 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 SLC6A20Q9NP91 592 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 PCDH12Q9NPG4 1184 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 PCOLCE2Q9UKZ9 415 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 RUVBL1Q9Y265 456 aaKnown RBP7.36□□□□□ -1.23
CNOT4-201ENST00000315544 TSPAN6O43657 245 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 SRPRAP08240 638 aaKnown RBP7.36□□□□□ -1.23
CNOT4-201ENST00000315544 MMP11P24347 488 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 HLA-DMAP28067 261 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 HNF4AP41235 474 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 GABRA4P48169 554 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 FOXK2Q01167 660 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 RGS21Q2M5E4 152 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 ARMC12Q5T9G4 340 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 IL31Q6EBC2 164 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 ARL14EPQ8N8R7 260 aaPredicted RBP7.36□□□□□ -1.23
CNOT4-201ENST00000315544 TEX19Q8NA77 164 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 CLHC1Q8NHS4 586 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 REG4Q9BYZ8 158 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 GHITMQ9H3K2 345 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 KCNK12Q9HB15 430 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 SNX7Q9UNH6 387 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 CDH10Q9Y6N8 788 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 CFAP99D6REC4 459 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 M0R129 80 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 SCAMP3O14828 347 aaKnown RBP7.36□□□□□ -1.23
CNOT4-201ENST00000315544 FFAR3O14843 346 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 SURF4O15260 269 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 GPR42O15529 346 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 NDUFS3O75489 264 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 FTH1P02794 183 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 CKMP06732 381 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 NGFRP08138 427 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 STSP08842 583 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 TNFSF8P32971 234 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 ETV3P41162 512 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 OR1G1P47890 313 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 DMC1Q14565 340 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 ZNF235Q14590 738 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 OTUD3Q5T2D3 398 aaPredicted RBP7.36□□□□□ -1.23
CNOT4-201ENST00000315544 IER5LQ5T953 404 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 MEDAGQ5VYS4 303 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 TMEM53Q6P2H8 277 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 ARMC8Q8IUR7 673 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 LRRC75AQ8NAA5 344 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 FAM71CQ8NEG0 241 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 PROKR2Q8NFJ6 384 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 OR2A1Q8NGT9 310 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 UPRTQ96BW1 309 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 ZBED6CLQ96FA7 236 aaPredicted RBP7.36□□□□□ -1.23
CNOT4-201ENST00000315544 ZNF582Q96NG8 517 aaPredicted RBP7.36□□□□□ -1.23
CNOT4-201ENST00000315544 SMG9Q9H0W8 520 aaKnown RBP7.36□□□□□ -1.23
CNOT4-201ENST00000315544 ACSS1Q9NUB1 689 aaPredicted RBP7.36□□□□□ -1.23
CNOT4-201ENST00000315544 CBLCQ9ULV8 474 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 DOLKQ9UPQ8 538 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 ZFR2Q9UPR6 939 aaKnown RBP7.36□□□□□ -1.23
CNOT4-201ENST00000315544 POFUT2Q9Y2G5 429 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 FIS1Q9Y3D6 152 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 C1orf232A0A0U1RR37 186 aa7.35□□□□□ -1.23
CNOT4-201ENST00000315544 PLD2O14939 933 aa7.35□□□□□ -1.23
CNOT4-201ENST00000315544 ENTPD6O75354 484 aa7.35□□□□□ -1.23
CNOT4-201ENST00000315544 RECQL5O94762 991 aaPredicted RBP7.35□□□□□ -1.23
CNOT4-201ENST00000315544 ALOX5P09917 674 aa7.35□□□□□ -1.23
CNOT4-201ENST00000315544 RPS5P46782 204 aaKnown RBP7.35□□□□□ -1.23
CNOT4-201ENST00000315544 TBPL1P62380 186 aa7.35□□□□□ -1.23
CNOT4-201ENST00000315544 SIM1P81133 766 aaPredicted RBP7.35□□□□□ -1.23
CNOT4-201ENST00000315544 HOXC5Q00444 222 aa7.35□□□□□ -1.23
CNOT4-201ENST00000315544 NR6A1Q15406 480 aa7.35□□□□□ -1.23
CNOT4-201ENST00000315544 XKR6Q5GH73 641 aa7.35□□□□□ -1.23
CNOT4-201ENST00000315544 C3orf38Q5JPI3 329 aa7.35□□□□□ -1.23
CNOT4-201ENST00000315544 ATAD3CQ5T2N8 411 aa7.35□□□□□ -1.23
CNOT4-201ENST00000315544 SP5Q6BEB4 398 aaPredicted RBP7.35□□□□□ -1.23
CNOT4-201ENST00000315544 RETSATQ6NUM9 610 aa7.35□□□□□ -1.23
CNOT4-201ENST00000315544 AGTRAPQ6RW13 159 aa7.35□□□□□ -1.23
CNOT4-201ENST00000315544 SPESP1Q6UW49 350 aa7.35□□□□□ -1.23
CNOT4-201ENST00000315544 SPATC1Q76KD6 591 aa7.35□□□□□ -1.23
CNOT4-201ENST00000315544 VASH1Q7L8A9 365 aaPredicted RBP7.35□□□□□ -1.23
CNOT4-201ENST00000315544 SLC22A16Q86VW1 577 aa7.35□□□□□ -1.23
CNOT4-201ENST00000315544 C1orf216Q8TAB5 229 aa7.35□□□□□ -1.23
CNOT4-201ENST00000315544 FIG4Q92562 907 aa7.35□□□□□ -1.23
CNOT4-201ENST00000315544 FGF13Q92913 245 aa7.35□□□□□ -1.23
CNOT4-201ENST00000315544 RNF34Q969K3 372 aa7.35□□□□□ -1.23
CNOT4-201ENST00000315544 SH3GL1Q99961 368 aa7.35□□□□□ -1.23
CNOT4-201ENST00000315544 LGR4Q9BXB1 951 aa7.35□□□□□ -1.23
CNOT4-201ENST00000315544 HDAC8Q9BY41 377 aa7.35□□□□□ -1.23
CNOT4-201ENST00000315544 PIF1Q9H611 641 aa7.35□□□□□ -1.23
CNOT4-201ENST00000315544 ASB8Q9H765 288 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms