RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 PUM1Q14671 1186 aaKnown RBP eCLIP11.75□□□□□ -0.53
RNF4-201ENST00000314289 KCNJ8Q15842 424 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 CTF1Q16619 201 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 INAVAQ3KP66 663 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 ABHD17CQ6PCB6 329 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 TMEM107Q6UX40 140 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 OR4N5Q8IXE1 308 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 TDHQ8IZJ6 230 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 OR5P2Q8WZ92 322 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 MUL1Q969V5 352 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 COL26A1Q96A83 441 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 RDH12Q96NR8 316 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 ZNF300Q96RE9 604 aaPredicted RBP11.75□□□□□ -0.53
RNF4-201ENST00000314289 AKIP1Q9NQ31 210 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 KLF15Q9UIH9 416 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 SHISA7A6NL88 538 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 ZW10O43264 779 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 AIFM1O95831 613 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 RECKO95980 971 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 CMPK1P30085 196 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 MAP2K4P45985 399 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 SRP54P61011 504 aaKnown RBP11.74□□□□□ -0.53
RNF4-201ENST00000314289 GPR18Q14330 331 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 LASP1Q14847 261 aaKnown RBP11.74□□□□□ -0.53
RNF4-201ENST00000314289 ZNF630Q2M218 657 aaPredicted RBP11.74□□□□□ -0.53
RNF4-201ENST00000314289 B3GNT8Q7Z7M8 397 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 ANKRD13BQ86YJ7 626 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 SLC22A18ASQ8N1D0 253 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 CNRIP1Q96F85 164 aaPredicted RBP11.74□□□□□ -0.53
RNF4-201ENST00000314289 ZBED6CLQ96FA7 236 aaPredicted RBP11.74□□□□□ -0.53
RNF4-201ENST00000314289 C16orf58Q96GQ5 468 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 AMDHD1Q96NU7 426 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 QRFPRQ96P65 431 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 MAPKAP1Q9BPZ7 522 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 TPSD1Q9BZJ3 242 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 OR51I1Q9H343 314 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 TMEM38AQ9H6F2 299 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 SLC35C2Q9NQQ7 365 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 ERVK-18Q9QC07 812 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 POU2F3Q9UKI9 436 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 SLC6A14Q9UN76 642 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 ANGPT4Q9Y264 503 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 PADI2Q9Y2J8 665 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 PCDHGB3Q9Y5G1 929 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 OR6C74A6NCV1 312 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 SLC16A6O15403 523 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 SLC28A2O43868 658 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 UGT2B11O75310 529 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 BMP4P12644 408 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 ATP5A1P25705 553 aaKnown RBP11.74□□□□□ -0.53
RNF4-201ENST00000314289 IDH2P48735 452 aaKnown RBP11.74□□□□□ -0.53
RNF4-201ENST00000314289 PPP1CAP62136 330 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 EPS8Q12929 822 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 NPRL3Q12980 569 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 LTB4RQ15722 352 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 SAXO2Q658L1 398 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 REEP3Q6NUK4 255 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 SLC22A16Q86VW1 577 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 LGI4Q8N135 537 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 SIMC1Q8NDZ2 872 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 OR10G2Q8NGC3 310 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 FAM3CQ92520 227 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 NEURL3Q96EH8 262 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 COL21A1Q96P44 957 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 GAS2L1Q99501 681 aaPredicted RBP11.74□□□□□ -0.53
RNF4-201ENST00000314289 SPATA9Q9BWV2 254 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 ALOXE3Q9BYJ1 711 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 ITGB1BP2Q9UKP3 347 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 ABCA7Q8IZY2 2146 aa11.74□□□□□ -0.53
RNF4-201ENST00000314289 CTSVO60911 334 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 SEMA4FO95754 770 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 ZNF888P0CJ79 500 aaPredicted RBP11.73□□□□□ -0.53
RNF4-201ENST00000314289 LIM2P55344 173 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 PCBP3P57721 371 aaKnown RBP11.73□□□□□ -0.53
RNF4-201ENST00000314289 ID2Q02363 134 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 DEFB134Q4QY38 66 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 DEF8Q6ZN54 512 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 ZNF438Q7Z4V0 828 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 VN1R4Q7Z5H5 301 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 COMTD1Q86VU5 262 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 NRROSQ86YC3 692 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 TRIM48Q8IWZ4 208 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 HTRA1Q92743 480 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 KAT2AQ92830 837 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 KIR3DX1Q9H7L2 352 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 SIAEQ9HAT2 523 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 KCNE3Q9Y6H6 103 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 ZNF99A8MXY4 864 aaPredicted RBP11.73□□□□□ -0.53
RNF4-201ENST00000314289 MAN2B1O00754 1011 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 SEMA7AO75326 666 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 PSMB9P28065 219 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 NKX2-5P52952 324 aaPredicted RBP11.73□□□□□ -0.53
RNF4-201ENST00000314289 ADPRMQ3LIE5 342 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 USP30Q70CQ3 517 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 GPR32P1Q8NGA4 272 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 PSMA8Q8TAA3 256 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 UTP15Q8TED0 518 aaKnown RBP11.73□□□□□ -0.53
RNF4-201ENST00000314289 SCARF2Q96GP6 870 aaPredicted RBP11.73□□□□□ -0.53
RNF4-201ENST00000314289 SLX1AQ9BQ83 275 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 PRR14Q9BWN1 585 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms