RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 SLC28A2O43868 658 aa15.72■□□□□ 0.11
CLCF1-201ENST00000312438 PPP2R1BP30154 601 aa15.72■□□□□ 0.11
CLCF1-201ENST00000312438 DNAJA1P31689 397 aaKnown RBP15.72■□□□□ 0.11
CLCF1-201ENST00000312438 SLC36A3Q495N2 470 aa15.72■□□□□ 0.11
CLCF1-201ENST00000312438 TMEM154Q6P9G4 183 aa15.72■□□□□ 0.11
CLCF1-201ENST00000312438 SHQ1Q6PI26 577 aaKnown RBP15.72■□□□□ 0.11
CLCF1-201ENST00000312438 DHRSXQ8N5I4 330 aa15.72■□□□□ 0.11
CLCF1-201ENST00000312438 OR5D16Q8NGK9 328 aa15.72■□□□□ 0.11
CLCF1-201ENST00000312438 KAT2AQ92830 837 aa15.72■□□□□ 0.11
CLCF1-201ENST00000312438 NRBF2Q96F24 287 aa15.72■□□□□ 0.11
CLCF1-201ENST00000312438 ZC3H10Q96K80 434 aaKnown RBP15.72■□□□□ 0.11
CLCF1-201ENST00000312438 RDH12Q96NR8 316 aa15.72■□□□□ 0.11
CLCF1-201ENST00000312438 ZNF347Q96SE7 839 aa15.72■□□□□ 0.11
CLCF1-201ENST00000312438 IRAK4Q9NWZ3 460 aa15.72■□□□□ 0.11
CLCF1-201ENST00000312438 USE1Q9NZ43 259 aa15.72■□□□□ 0.11
CLCF1-201ENST00000312438 U3KQV3 271 aa15.72■□□□□ 0.11
CLCF1-201ENST00000312438 A0A0A6YYC8 382 aaPredicted RBP15.71■□□□□ 0.11
CLCF1-201ENST00000312438 EIF4E1BA6NMX2 242 aaKnown RBP15.71■□□□□ 0.11
CLCF1-201ENST00000312438 FAM227AF5H4B4 570 aa15.71■□□□□ 0.11
CLCF1-201ENST00000312438 I3L1I5 382 aaPredicted RBP15.71■□□□□ 0.11
CLCF1-201ENST00000312438 FOXS1O43638 330 aa15.71■□□□□ 0.11
CLCF1-201ENST00000312438 RDH16O75452 317 aa15.71■□□□□ 0.11
CLCF1-201ENST00000312438 ATP1B1P05026 303 aa15.71■□□□□ 0.11
CLCF1-201ENST00000312438 NR2F1P10589 423 aa15.71■□□□□ 0.11
CLCF1-201ENST00000312438 ITGA2P17301 1181 aa15.71■□□□□ 0.11
CLCF1-201ENST00000312438 GTF2A1P52655 376 aaPredicted RBP15.71■□□□□ 0.11
CLCF1-201ENST00000312438 ITGA1P56199 1179 aa15.71■□□□□ 0.11
CLCF1-201ENST00000312438 HSD11B2P80365 405 aa15.71■□□□□ 0.11
CLCF1-201ENST00000312438 PPP2R2BQ00005 443 aa15.71■□□□□ 0.11
CLCF1-201ENST00000312438 LTB4RQ15722 352 aa15.71■□□□□ 0.11
CLCF1-201ENST00000312438 SYPL1Q16563 259 aa15.71■□□□□ 0.11
CLCF1-201ENST00000312438 HLA-BQ31612 363 aa15.71■□□□□ 0.11
CLCF1-201ENST00000312438 AMZ1Q400G9 498 aa15.71■□□□□ 0.11
CLCF1-201ENST00000312438 TMEM179BQ7Z7N9 219 aa15.71■□□□□ 0.11
CLCF1-201ENST00000312438 CARM1Q86X55 608 aa15.71■□□□□ 0.11
CLCF1-201ENST00000312438 Q8N9G6 341 aaPredicted RBP15.71■□□□□ 0.11
CLCF1-201ENST00000312438 OR6C4Q8NGE1 309 aa15.71■□□□□ 0.11
CLCF1-201ENST00000312438 RASSF5Q8WWW0 418 aa15.71■□□□□ 0.11
CLCF1-201ENST00000312438 YIPF4Q9BSR8 244 aa15.71■□□□□ 0.11
CLCF1-201ENST00000312438 RUBCNLQ9H714 662 aa15.71■□□□□ 0.11
CLCF1-201ENST00000312438 DDX18Q9NVP1 670 aaKnown RBP15.71■□□□□ 0.11
CLCF1-201ENST00000312438 PTGFRNQ9P2B2 879 aa15.71■□□□□ 0.11
CLCF1-201ENST00000312438 FBXO4Q9UKT5 387 aa15.71■□□□□ 0.11
CLCF1-201ENST00000312438 SPAG17Q6Q759 2223 aa15.71■□□□□ 0.11
CLCF1-201ENST00000312438 PRAMEF27A3QJZ7 478 aa15.71■□□□□ 0.1
CLCF1-201ENST00000312438 FITM1A5D6W6 292 aa15.71■□□□□ 0.1
CLCF1-201ENST00000312438 DUXAA6NLW8 204 aa15.71■□□□□ 0.1
CLCF1-201ENST00000312438 ASNA1O43681 348 aa15.71■□□□□ 0.1
CLCF1-201ENST00000312438 FGF17O60258 216 aa15.71■□□□□ 0.1
CLCF1-201ENST00000312438 LDB3O75112 727 aa15.71■□□□□ 0.1
CLCF1-201ENST00000312438 SERPINB7O75635 380 aa15.71■□□□□ 0.1
CLCF1-201ENST00000312438 SLITRK5O94991 958 aa15.71■□□□□ 0.1
CLCF1-201ENST00000312438 DIRAS1O95057 198 aa15.71■□□□□ 0.1
CLCF1-201ENST00000312438 MFN2O95140 757 aa15.71■□□□□ 0.1
CLCF1-201ENST00000312438 NSA2O95478 260 aaKnown RBP15.71■□□□□ 0.1
CLCF1-201ENST00000312438 PNLIPP16233 465 aa15.71■□□□□ 0.1
CLCF1-201ENST00000312438 FPR1P21462 350 aa15.71■□□□□ 0.1
CLCF1-201ENST00000312438 CD1CP29017 333 aa15.71■□□□□ 0.1
CLCF1-201ENST00000312438 ARL4DP49703 201 aa15.71■□□□□ 0.1
CLCF1-201ENST00000312438 CRISP3P54108 245 aa15.71■□□□□ 0.1
CLCF1-201ENST00000312438 EMP3P54852 163 aa15.71■□□□□ 0.1
CLCF1-201ENST00000312438 CFHR1Q03591 330 aa15.71■□□□□ 0.1
CLCF1-201ENST00000312438 EPS8Q12929 822 aa15.71■□□□□ 0.1
CLCF1-201ENST00000312438 PPP1R8Q12972 351 aaKnown RBP15.71■□□□□ 0.1
CLCF1-201ENST00000312438 RPS26P11Q5JNZ5 115 aaPredicted RBP15.71■□□□□ 0.1
CLCF1-201ENST00000312438 PEAR1Q5VY43 1037 aaPredicted RBP15.71■□□□□ 0.1
CLCF1-201ENST00000312438 WDR74Q6RFH5 385 aaPredicted RBP15.71■□□□□ 0.1
CLCF1-201ENST00000312438 KANSL1Q7Z3B3 1105 aa15.71■□□□□ 0.1
CLCF1-201ENST00000312438 LGI4Q8N135 537 aa15.71■□□□□ 0.1
CLCF1-201ENST00000312438 OR2L13Q8N349 312 aa15.71■□□□□ 0.1
CLCF1-201ENST00000312438 SMYD1Q8NB12 490 aa15.71■□□□□ 0.1
CLCF1-201ENST00000312438 TMEM52Q8NDY8 209 aa15.71■□□□□ 0.1
CLCF1-201ENST00000312438 OR7G2Q8NG99 324 aa15.71■□□□□ 0.1
CLCF1-201ENST00000312438 SAP25Q8TEE9 199 aa15.71■□□□□ 0.1
CLCF1-201ENST00000312438 GEMIN6Q8WXD5 167 aaKnown RBP15.71■□□□□ 0.1
CLCF1-201ENST00000312438 C16orf58Q96GQ5 468 aa15.71■□□□□ 0.1
CLCF1-201ENST00000312438 TREX2Q9BQ50 279 aaPredicted RBP15.71■□□□□ 0.1
CLCF1-201ENST00000312438 ACTRT3Q9BYD9 372 aa15.71■□□□□ 0.1
CLCF1-201ENST00000312438 REEP1Q9H902 201 aa15.71■□□□□ 0.1
CLCF1-201ENST00000312438 BCL2L10Q9HD36 194 aa15.71■□□□□ 0.1
CLCF1-201ENST00000312438 NDUFAF4Q9P032 175 aa15.71■□□□□ 0.1
CLCF1-201ENST00000312438 SEMA5BQ9P283 1151 aa15.71■□□□□ 0.1
CLCF1-201ENST00000312438 PCDHGB3Q9Y5G1 929 aa15.71■□□□□ 0.1
CLCF1-201ENST00000312438 EML5Q05BV3 1969 aa15.7■□□□□ 0.1
CLCF1-201ENST00000312438 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.7■□□□□ 0.1
CLCF1-201ENST00000312438 BLACEA4D250 179 aa15.7■□□□□ 0.1
CLCF1-201ENST00000312438 TMEM221A6NGB7 291 aa15.7■□□□□ 0.1
CLCF1-201ENST00000312438 H0YAE9 185 aa15.7■□□□□ 0.1
CLCF1-201ENST00000312438 M0R296 226 aa15.7■□□□□ 0.1
CLCF1-201ENST00000312438 YKT6O15498 198 aa15.7■□□□□ 0.1
CLCF1-201ENST00000312438 BMP10O95393 424 aa15.7■□□□□ 0.1
CLCF1-201ENST00000312438 SNAP29O95721 258 aa15.7■□□□□ 0.1
CLCF1-201ENST00000312438 THRBP10828 461 aa15.7■□□□□ 0.1
CLCF1-201ENST00000312438 RNH1P13489 461 aaKnown RBP15.7■□□□□ 0.1
CLCF1-201ENST00000312438 CNR2P34972 360 aa15.7■□□□□ 0.1
CLCF1-201ENST00000312438 CAPGP40121 348 aa15.7■□□□□ 0.1
CLCF1-201ENST00000312438 COL9A2Q14055 689 aaPredicted RBP15.7■□□□□ 0.1
CLCF1-201ENST00000312438 GK3PQ14409 553 aa15.7■□□□□ 0.1
CLCF1-201ENST00000312438 GRM7Q14831 915 aa15.7■□□□□ 0.1
CLCF1-201ENST00000312438 DUSP7Q16829 419 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms