RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 KRT73Q86Y46 540 aa14.32□□□□□ -0.12
CSDC2-201ENST00000306149 DCUN1D3Q8IWE4 304 aa14.32□□□□□ -0.12
CSDC2-201ENST00000306149 SLC7A5P1Q8MH63 180 aa14.32□□□□□ -0.12
CSDC2-201ENST00000306149 C12orf76Q8N812 135 aaPredicted RBP14.32□□□□□ -0.12
CSDC2-201ENST00000306149 TMCO6Q96DC7 493 aa14.32□□□□□ -0.12
CSDC2-201ENST00000306149 CEP19Q96LK0 163 aa14.32□□□□□ -0.12
CSDC2-201ENST00000306149 AIF1LQ9BQI0 150 aa14.32□□□□□ -0.12
CSDC2-201ENST00000306149 BARHL1Q9BZE3 327 aa14.32□□□□□ -0.12
CSDC2-201ENST00000306149 XKR8Q9H6D3 395 aa14.32□□□□□ -0.12
CSDC2-201ENST00000306149 TLX2O43763 284 aaPredicted RBP14.32□□□□□ -0.12
CSDC2-201ENST00000306149 TNFSF8P32971 234 aa14.32□□□□□ -0.12
CSDC2-201ENST00000306149 RCVRNP35243 200 aa14.32□□□□□ -0.12
CSDC2-201ENST00000306149 NR4A2P43354 598 aa14.32□□□□□ -0.12
CSDC2-201ENST00000306149 SNRPGP62308 76 aaKnown RBP14.32□□□□□ -0.12
CSDC2-201ENST00000306149 MADCAM1Q13477 382 aa14.32□□□□□ -0.12
CSDC2-201ENST00000306149 ZNF750Q32MQ0 723 aa14.32□□□□□ -0.12
CSDC2-201ENST00000306149 CASP12Q6UXS9 341 aa14.32□□□□□ -0.12
CSDC2-201ENST00000306149 FAM92BQ6ZTR7 304 aa14.32□□□□□ -0.12
CSDC2-201ENST00000306149 OTUB2Q96DC9 234 aa14.32□□□□□ -0.12
CSDC2-201ENST00000306149 ZNF514Q96K75 400 aaPredicted RBP14.32□□□□□ -0.12
CSDC2-201ENST00000306149 C17orf62Q9BQA9 187 aa14.32□□□□□ -0.12
CSDC2-201ENST00000306149 NEK6Q9HC98 313 aa14.32□□□□□ -0.12
CSDC2-201ENST00000306149 DYRK4Q9NR20 520 aa14.32□□□□□ -0.12
CSDC2-201ENST00000306149 SNTG1Q9NSN8 517 aa14.32□□□□□ -0.12
CSDC2-201ENST00000306149 NDOR1Q9UHB4 597 aa14.32□□□□□ -0.12
CSDC2-201ENST00000306149 GPR34Q9UPC5 381 aa14.32□□□□□ -0.12
CSDC2-201ENST00000306149 HEPACAM2A8MVW5 462 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 FAM47E-STBD1D6RA91 191 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 H3BQ06 376 aaPredicted RBP14.31□□□□□ -0.12
CSDC2-201ENST00000306149 SCAMP1O15126 338 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 LRRTM2O43300 516 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 SLITRK5O94991 958 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 HBQ1P09105 142 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 GJA8P48165 433 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 KCNJ5P48544 419 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 PCBP4P57723 403 aaKnown RBP14.31□□□□□ -0.12
CSDC2-201ENST00000306149 ILKQ13418 452 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 ZNF234Q14588 700 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 SPHARQ15513 63 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 ZMAT1Q5H9K5 638 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 TMEM201Q5SNT2 666 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 LIPKQ5VXJ0 399 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 TMC5Q6UXY8 1006 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 UBE3DQ7Z6J8 389 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 OR8H2Q8N162 312 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 Q8N9G6 341 aaPredicted RBP14.31□□□□□ -0.12
CSDC2-201ENST00000306149 KLHL6Q8WZ60 621 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 TMEM203Q969S6 136 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 PAWRQ96IZ0 340 aaKnown RBP14.31□□□□□ -0.12
CSDC2-201ENST00000306149 ZNF354BQ96LW1 612 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 OR51I1Q9H343 314 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 TBC1D24Q9ULP9 559 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 SMIM30A4D0T7 59 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 SLC9A3R1O14745 358 aaPredicted RBP14.31□□□□□ -0.12
CSDC2-201ENST00000306149 PRKYO43930 277 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 CCNKO75909 580 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 NR2F1P10589 423 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 AZGP1P25311 298 aaKnown RBP14.31□□□□□ -0.12
CSDC2-201ENST00000306149 CSTF2P33240 577 aaKnown RBP eCLIP14.31□□□□□ -0.12
CSDC2-201ENST00000306149 GPC1P35052 558 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 CLCNKAP51800 687 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 ZNF91Q05481 1191 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 DPTQ07507 201 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 RSBN1Q5VWQ0 802 aaPredicted RBP14.31□□□□□ -0.12
CSDC2-201ENST00000306149 MEDAGQ5VYS4 303 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 ZNF544Q6NX49 715 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 PODNL1Q6PEZ8 512 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 GDPGP1Q6ZNW5 385 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 GALNT6Q8NCL4 622 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 CXorf40AQ8TE69 158 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 TEFMQ96QE5 360 aaKnown RBP14.31□□□□□ -0.12
CSDC2-201ENST00000306149 OR2A14Q96R47 310 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 GPA33Q99795 319 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 TSSK6Q9BXA6 273 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 QRSL1Q9H0R6 528 aaKnown RBP14.31□□□□□ -0.12
CSDC2-201ENST00000306149 WBP11Q9Y2W2 641 aaKnown RBP14.31□□□□□ -0.12
CSDC2-201ENST00000306149 GRIP1Q9Y3R0 1128 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 IRAK3Q9Y616 596 aa14.31□□□□□ -0.12
CSDC2-201ENST00000306149 CARNS1A5YM72 827 aa14.3□□□□□ -0.12
CSDC2-201ENST00000306149 IGLON5A6NGN9 336 aa14.3□□□□□ -0.12
CSDC2-201ENST00000306149 NTN1O95631 604 aa14.3□□□□□ -0.12
CSDC2-201ENST00000306149 HOXB3P14651 431 aaPredicted RBP14.3□□□□□ -0.12
CSDC2-201ENST00000306149 GPR19Q15760 415 aa14.3□□□□□ -0.12
CSDC2-201ENST00000306149 LINC01555Q8NAE3 123 aa14.3□□□□□ -0.12
CSDC2-201ENST00000306149 CAPSLQ8WWF8 208 aa14.3□□□□□ -0.12
CSDC2-201ENST00000306149 TMEM80Q96HE8 168 aa14.3□□□□□ -0.12
CSDC2-201ENST00000306149 POLR2J2Q9GZM3 115 aaKnown RBP14.3□□□□□ -0.12
CSDC2-201ENST00000306149 RHBGQ9H310 441 aa14.3□□□□□ -0.12
CSDC2-201ENST00000306149 ANKRA2Q9H9E1 313 aa14.3□□□□□ -0.12
CSDC2-201ENST00000306149 A4GNTQ9UNA3 340 aa14.3□□□□□ -0.12
CSDC2-201ENST00000306149 MGAT4BQ9UQ53 548 aa14.3□□□□□ -0.12
CSDC2-201ENST00000306149 CARD8Q9Y2G2 431 aa14.3□□□□□ -0.12
CSDC2-201ENST00000306149 OR1A2Q9Y585 309 aa14.3□□□□□ -0.12
CSDC2-201ENST00000306149 A0A1W2PPV9 198 aa14.3□□□□□ -0.12
CSDC2-201ENST00000306149 A0A1W2PS29 197 aa14.3□□□□□ -0.12
CSDC2-201ENST00000306149 NDUFS4O43181 175 aa14.3□□□□□ -0.12
CSDC2-201ENST00000306149 TPD52L2O43399 206 aaKnown RBP14.3□□□□□ -0.12
CSDC2-201ENST00000306149 VEGFDO43915 354 aa14.3□□□□□ -0.12
CSDC2-201ENST00000306149 ERAL1O75616 437 aaKnown RBP14.3□□□□□ -0.12
CSDC2-201ENST00000306149 FGF19O95750 216 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms