RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 PCDHGA6Q9Y5G7 932 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 ATRNL1Q5VV63 1379 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 MYOCOSA0A1B0GUC4 107 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 A0A1W2PP18 115 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 MMP20O60882 483 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 PTBP1P26599 531 aaKnown RBP eCLIP5.33□□□□□ -1.56
CPSF2-201ENST00000298875 SNU13P55769 128 aaKnown RBP5.33□□□□□ -1.56
CPSF2-201ENST00000298875 PER3P56645 1201 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 SELENOVP59797 346 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 BCL2A1Q16548 175 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 LRIT3Q3SXY7 679 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 CILP2Q8IUL8 1156 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 ANGPTL6Q8NI99 470 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 LRCH3Q96II8 777 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 FCRL5Q96RD9 977 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 OR51B5Q9H339 312 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 ZNF395Q9H8N7 513 aaPredicted RBP5.33□□□□□ -1.56
CPSF2-201ENST00000298875 TMPRSS11EQ9UL52 423 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 CDC14AQ9UNH5 594 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 LYPLA2O95372 231 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 HRGP04196 525 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 MAS1P04201 325 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 ZDHHC11BP0C7U3 371 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 CAPN3P20807 821 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 CHATP28329 748 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 AGTR2P50052 363 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 CD81P60033 236 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 ECH1Q13011 328 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 ATP6AP1Q15904 470 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 SGCAQ16586 387 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 PTCHD3Q3KNS1 767 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 CLEC20AQ6ZU45 233 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 VASH1Q7L8A9 365 aaPredicted RBP5.33□□□□□ -1.56
CPSF2-201ENST00000298875 KLBQ86Z14 1044 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 TMEM151AQ8N4L1 468 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 CERS5Q8N5B7 392 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 BOLLQ8N9W6 283 aaKnown RBP5.33□□□□□ -1.56
CPSF2-201ENST00000298875 ZNF84P51523 738 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 HTRA4P83105 476 aaPredicted RBP5.33□□□□□ -1.56
CPSF2-201ENST00000298875 FLI1Q01543 452 aaPredicted RBP5.33□□□□□ -1.56
CPSF2-201ENST00000298875 PON2Q15165 354 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 SOWAHAQ2M3V2 549 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 UBE2UQ5VVX9 321 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 DEFB119Q8N690 84 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 STK35Q8TDR2 534 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 ZMAT5Q9UDW3 170 aaKnown RBP5.33□□□□□ -1.56
CPSF2-201ENST00000298875 C19orf25Q9UFG5 118 aaPredicted RBP5.33□□□□□ -1.56
CPSF2-201ENST00000298875 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.33□□□□□ -1.56
CPSF2-201ENST00000298875 MDFIC2A0A1B0GVS7 189 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 FAM159BA6NKW6 160 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 OR2B3O76000 313 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 UQCRC2P22695 453 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 COQ5Q5HYK3 327 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 FAM162BQ5T6X4 162 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 CPNE8Q86YQ8 564 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 P2RY13Q9BPV8 354 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 NIFKQ9BYG3 293 aaKnown RBP5.33□□□□□ -1.56
CPSF2-201ENST00000298875 TTYH3Q9C0H2 523 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 PLEKHA3Q9HB20 300 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 ADAM18Q9Y3Q7 739 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 ARGFXA6NJG6 315 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 SMLR1H3BR10 107 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 J3KR12 359 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 DLX3O60479 287 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 SULT1C4O75897 302 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 DFFBO76075 338 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 TBX18O95935 607 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 HOXD8P13378 290 aaPredicted RBP5.33□□□□□ -1.56
CPSF2-201ENST00000298875 NDUFS1P28331 727 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 NAA10P41227 235 aaPredicted RBP5.33□□□□□ -1.56
CPSF2-201ENST00000298875 ACTA2P62736 377 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 ACTG2P63267 376 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 OLIG2Q13516 323 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 ZNF674Q2M3X9 581 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 GPR33Q49SQ1 333 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 ZER1Q7Z7L7 766 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 PSD4Q8NDX1 1056 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 PROKR1Q8TCW9 393 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 THAP4Q8WY91 577 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 SLCO2A1Q92959 643 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 ZNF599Q96NL3 588 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 ACTRT3Q9BYD9 372 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 LCHNA4D1U4 455 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 OR6C74A6NCV1 312 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 EEF1E1-BLOC1S5C9J1V9 151 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 FOXD2O60548 495 aaPredicted RBP5.33□□□□□ -1.56
CPSF2-201ENST00000298875 S1PR1P21453 382 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 NRIP1P48552 1158 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 HNRNPKP61978 463 aaKnown RBP eCLIP5.33□□□□□ -1.56
CPSF2-201ENST00000298875 NIPAL4Q0D2K0 466 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 ZNF648Q5T619 568 aaPredicted RBP5.33□□□□□ -1.56
CPSF2-201ENST00000298875 EMC10Q5UCC4 262 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 RPL13AP3Q6NVV1 102 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 ZDHHC24Q6UX98 284 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 RETREG3Q86VR2 466 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 BEST3Q8N1M1 668 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 KRTCAP2Q8N6L1 136 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 TSTD1Q8NFU3 115 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 PPIL3Q9H2H8 161 aaKnown RBP5.33□□□□□ -1.56
CPSF2-201ENST00000298875 COL20A1Q9P218 1284 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms