RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 PTGER1P34995 402 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 ITGA1P56199 1179 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 OLR1P78380 273 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 KRT80Q6KB66 452 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 TMEM107Q6UX40 140 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 PRSS41Q7RTY9 318 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 TMEM179BQ7Z7N9 219 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 HIPK1Q86Z02 1210 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 HS3ST5Q8IZT8 346 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 DHRSXQ8N5I4 330 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 OR56A1Q8NGH5 318 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 SLC38A5Q8WUX1 472 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 CYGBQ8WWM9 190 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 RAB8BQ92930 207 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 DTNBP1Q96EV8 351 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 MAGED4Q96JG8 741 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 C7orf34Q96L11 122 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 MAP3K3Q99759 626 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 RBM4BQ9BQ04 359 aaKnown RBP13.43□□□□□ -0.26
C9orf3-202ENST00000297979 RBM4Q9BWF3 364 aaKnown RBP13.43□□□□□ -0.26
C9orf3-202ENST00000297979 OR51I1Q9H343 314 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 VNN3Q9NY84 501 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 USE1Q9NZ43 259 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 PADI2Q9Y2J8 665 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 U3KQV3 271 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 THADAQ6YHU6 1953 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 HCRTR1O43613 425 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 SNAP29O95721 258 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 C9P02748 559 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 FHP07954 510 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 CAPGP40121 348 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 RXRGP48443 463 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 FNTBP49356 437 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 PPM1FP49593 454 aaPredicted RBP13.43□□□□□ -0.26
C9orf3-202ENST00000297979 KHKP50053 298 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 ZXDAP98168 799 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 MYBPC1Q00872 1141 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 PPP1R8Q12972 351 aaKnown RBP13.43□□□□□ -0.26
C9orf3-202ENST00000297979 GPR19Q15760 415 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 IFI44LQ53G44 452 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 SHQ1Q6PI26 577 aaKnown RBP13.43□□□□□ -0.26
C9orf3-202ENST00000297979 FAM92BQ6ZTR7 304 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 OR9A2Q8NGT5 310 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 TMEM19Q96HH6 336 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 ERVMER34-1Q9H9K5 563 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 CD320Q9NPF0 282 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 IFT80Q9P2H3 777 aaPredicted RBP13.43□□□□□ -0.26
C9orf3-202ENST00000297979 PDP2Q9P2J9 529 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 RAB23Q9ULC3 237 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 MKL2Q9ULH7 1088 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 SPACA6W5XKT8 324 aa13.43□□□□□ -0.26
C9orf3-202ENST00000297979 RHPN2P1A8MT19 583 aa13.42□□□□□ -0.26
C9orf3-202ENST00000297979 GALR3O60755 368 aaPredicted RBP13.42□□□□□ -0.26
C9orf3-202ENST00000297979 DNAJB6O75190 326 aa13.42□□□□□ -0.26
C9orf3-202ENST00000297979 TNFAIP8O95379 198 aa13.42□□□□□ -0.26
C9orf3-202ENST00000297979 TFPTP0C1Z6 253 aa13.42□□□□□ -0.26
C9orf3-202ENST00000297979 THRBP10828 461 aa13.42□□□□□ -0.26
C9orf3-202ENST00000297979 PRR5P85299 388 aa13.42□□□□□ -0.26
C9orf3-202ENST00000297979 PPP2R2BQ00005 443 aa13.42□□□□□ -0.26
C9orf3-202ENST00000297979 MCATQ8IVS2 390 aaKnown RBP13.42□□□□□ -0.26
C9orf3-202ENST00000297979 ST13P4Q8IZP2 240 aaPredicted RBP13.42□□□□□ -0.26
C9orf3-202ENST00000297979 LRRC25Q8N386 305 aaPredicted RBP13.42□□□□□ -0.26
C9orf3-202ENST00000297979 SPPL2AQ8TCT8 520 aa13.42□□□□□ -0.26
C9orf3-202ENST00000297979 TCTN2Q96GX1 697 aa13.42□□□□□ -0.26
C9orf3-202ENST00000297979 RDH12Q96NR8 316 aa13.42□□□□□ -0.26
C9orf3-202ENST00000297979 STARD5Q9NSY2 213 aa13.42□□□□□ -0.26
C9orf3-202ENST00000297979 P2RX2Q9UBL9 471 aa13.42□□□□□ -0.26
C9orf3-202ENST00000297979 NAALAD2Q9Y3Q0 740 aa13.42□□□□□ -0.26
C9orf3-202ENST00000297979 TMEM238LA0A1B0GVL6 79 aa13.42□□□□□ -0.26
C9orf3-202ENST00000297979 TMEM247A6NEH6 219 aa13.42□□□□□ -0.26
C9orf3-202ENST00000297979 PLOD2O00469 737 aa13.42□□□□□ -0.26
C9orf3-202ENST00000297979 SMNDC1O75940 238 aaKnown RBP eCLIP13.42□□□□□ -0.26
C9orf3-202ENST00000297979 DIRAS1O95057 198 aa13.42□□□□□ -0.26
C9orf3-202ENST00000297979 PDGFBP01127 241 aaPredicted RBP13.42□□□□□ -0.26
C9orf3-202ENST00000297979 ALBP02768 609 aa13.42□□□□□ -0.26
C9orf3-202ENST00000297979 MATN1P21941 496 aa13.42□□□□□ -0.26
C9orf3-202ENST00000297979 ANXA11P50995 505 aaKnown RBP13.42□□□□□ -0.26
C9orf3-202ENST00000297979 PRKAG1P54619 331 aa13.42□□□□□ -0.26
C9orf3-202ENST00000297979 EPHA4P54764 986 aa13.42□□□□□ -0.26
C9orf3-202ENST00000297979 SIM1P81133 766 aaPredicted RBP13.42□□□□□ -0.26
C9orf3-202ENST00000297979 IQCCQ4KMZ1 466 aa13.42□□□□□ -0.26
C9orf3-202ENST00000297979 LYSMD4Q5XG99 296 aa13.42□□□□□ -0.26
C9orf3-202ENST00000297979 SLC44A2Q8IWA5 706 aaPredicted RBP13.42□□□□□ -0.26
C9orf3-202ENST00000297979 OR4K14Q8NGD5 310 aa13.42□□□□□ -0.26
C9orf3-202ENST00000297979 SMURF2Q9HAU4 748 aa13.42□□□□□ -0.26
C9orf3-202ENST00000297979 C3orf14Q9HBI5 128 aa13.42□□□□□ -0.26
C9orf3-202ENST00000297979 TMEM74BQ9NUR3 256 aa13.42□□□□□ -0.26
C9orf3-202ENST00000297979 GALNT8Q9NY28 637 aa13.42□□□□□ -0.26
C9orf3-202ENST00000297979 TRPC4Q9UBN4 977 aa13.42□□□□□ -0.26
C9orf3-202ENST00000297979 DNAH14Q0VDD8 3507 aa13.42□□□□□ -0.26
C9orf3-202ENST00000297979 EMC8O43402 210 aa13.41□□□□□ -0.26
C9orf3-202ENST00000297979 DPM1O60762 260 aa13.41□□□□□ -0.26
C9orf3-202ENST00000297979 GNAO1P09471 354 aa13.41□□□□□ -0.26
C9orf3-202ENST00000297979 OR12D1P0DN82 309 aa13.41□□□□□ -0.26
C9orf3-202ENST00000297979 MYF6P23409 242 aa13.41□□□□□ -0.26
C9orf3-202ENST00000297979 MC3RP41968 323 aa13.41□□□□□ -0.26
C9orf3-202ENST00000297979 RPS26P11Q5JNZ5 115 aaPredicted RBP13.41□□□□□ -0.26
C9orf3-202ENST00000297979 DNAJC22Q8N4W6 341 aa13.41□□□□□ -0.26
C9orf3-202ENST00000297979 OR5D16Q8NGK9 328 aa13.41□□□□□ -0.26
C9orf3-202ENST00000297979 ELP4Q96EB1 424 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms