RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 PRSS53Q2L4Q9 553 aa14.8□□□□□ -0.04
UBAP1-201ENST00000297661 LCN1P1Q5VSP4 162 aa14.8□□□□□ -0.04
UBAP1-201ENST00000297661 PLPP4Q5VZY2 271 aa14.8□□□□□ -0.04
UBAP1-201ENST00000297661 MSANTD1Q6ZTZ1 278 aa14.8□□□□□ -0.04
UBAP1-201ENST00000297661 OR8H3Q8N146 312 aa14.8□□□□□ -0.04
UBAP1-201ENST00000297661 C9orf62Q8N4C0 152 aa14.8□□□□□ -0.04
UBAP1-201ENST00000297661 ZNF740Q8NDX6 193 aa14.8□□□□□ -0.04
UBAP1-201ENST00000297661 GTPBP3Q969Y2 492 aaKnown RBP14.8□□□□□ -0.04
UBAP1-201ENST00000297661 MSANTD3Q96H12 275 aa14.8□□□□□ -0.04
UBAP1-201ENST00000297661 GFM1Q96RP9 751 aaKnown RBP14.8□□□□□ -0.04
UBAP1-201ENST00000297661 DOHHQ9BU89 302 aa14.8□□□□□ -0.04
UBAP1-201ENST00000297661 SPNS1Q9H2V7 528 aa14.8□□□□□ -0.04
UBAP1-201ENST00000297661 KCNE2Q9Y6J6 123 aa14.8□□□□□ -0.04
UBAP1-201ENST00000297661 DNMT3AQ9Y6K1 912 aaPredicted RBP14.8□□□□□ -0.04
UBAP1-201ENST00000297661 FAM227AF5H4B4 570 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 PSIP1O75475 530 aaKnown RBP14.79□□□□□ -0.04
UBAP1-201ENST00000297661 TIMP2P16035 220 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 LAG3P18627 525 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 VIPR1P32241 457 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 EVI2BP34910 448 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 CRYBB2P43320 205 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 MRPL28Q13084 256 aaKnown RBP14.79□□□□□ -0.04
UBAP1-201ENST00000297661 EXOC3L2Q2M3D2 409 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 LY6G5CQ5SRR4 150 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 GRHL2Q6ISB3 625 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 TMEM65Q6PI78 240 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 METTL3Q86U44 580 aaKnown RBP14.79□□□□□ -0.04
UBAP1-201ENST00000297661 C19orf43Q9BQ61 176 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 EVA1BQ9NVM1 165 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 CCDC88CQ9P219 2028 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 HIDE1A8MVS5 230 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 ATP6V1G2-DDX39BF2Z307 99 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 WWP2O00308 870 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 MYL12BO14950 172 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 CDRT1O95170 752 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 CKMT1AP12532 417 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 GLULP15104 373 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 ZNF8P17098 575 aaPredicted RBP14.79□□□□□ -0.04
UBAP1-201ENST00000297661 MYL12AP19105 171 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 XPAP23025 273 aaPredicted RBP14.79□□□□□ -0.04
UBAP1-201ENST00000297661 RRAS2P62070 204 aaPredicted RBP14.79□□□□□ -0.04
UBAP1-201ENST00000297661 POLR2LP62875 67 aaKnown RBP14.79□□□□□ -0.04
UBAP1-201ENST00000297661 CAMK1Q14012 370 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 PLAG1Q6DJT9 500 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 DDX53Q86TM3 631 aaKnown RBP14.79□□□□□ -0.04
UBAP1-201ENST00000297661 CDH24Q86UP0 819 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 C11orf65Q8NCR3 313 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 CREB3L4Q8TEY5 395 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 HYLS1Q96M11 299 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 SLC35A5Q9BS91 424 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 NLKQ9UBE8 527 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 NDRG2Q9UN36 371 aaKnown RBP14.79□□□□□ -0.04
UBAP1-201ENST00000297661 WNT6Q9Y6F9 365 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 H0YIV9 168 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 K7ESM1 405 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 NPC1O15118 1278 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 DPM1O60762 260 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 CATP04040 527 aaKnown RBP14.79□□□□□ -0.04
UBAP1-201ENST00000297661 IGFBP4P22692 258 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 SOAT1P35610 550 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 MAN2A2P49641 1150 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 PER3P56645 1201 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 TBPL1P62380 186 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 TMEM115Q12893 351 aaPredicted RBP14.79□□□□□ -0.04
UBAP1-201ENST00000297661 GPM6BQ13491 265 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 VEZF1Q14119 521 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 TEAD2Q15562 447 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 RAB30Q15771 203 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 HENMT1Q5T8I9 393 aaKnown RBP14.79□□□□□ -0.04
UBAP1-201ENST00000297661 GDPGP1Q6ZNW5 385 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 ABI3BPQ7Z7G0 1075 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 CFAP206Q8IYR0 622 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 GALNT11Q8NCW6 608 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 ATP6V1C2Q8NEY4 427 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 VPS37AQ8NEZ2 397 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 LHFPL5Q8TAF8 219 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 ZNF480Q8WV37 535 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 CHTF18Q8WVB6 975 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 MAGEB10Q96LZ2 347 aaPredicted RBP14.79□□□□□ -0.04
UBAP1-201ENST00000297661 SEC14L4Q9UDX3 406 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 POFUT2Q9Y2G5 429 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 AUP1Q9Y679 476 aa14.79□□□□□ -0.04
UBAP1-201ENST00000297661 MUC3AQ02505 3323 aa14.78□□□□□ -0.04
UBAP1-201ENST00000297661 NPIPB8E9PQR5 432 aa14.78□□□□□ -0.04
UBAP1-201ENST00000297661 PRMT3O60678 531 aa14.78□□□□□ -0.04
UBAP1-201ENST00000297661 TIA1P31483 386 aaKnown RBP eCLIP14.78□□□□□ -0.042e-7■□□□□ 8
UBAP1-201ENST00000297661 TALDO1P37837 337 aa14.78□□□□□ -0.04
UBAP1-201ENST00000297661 MVDP53602 400 aa14.78□□□□□ -0.04
UBAP1-201ENST00000297661 RPS26P62854 115 aaKnown RBP14.78□□□□□ -0.04
UBAP1-201ENST00000297661 CTAG1AP78358 180 aa14.78□□□□□ -0.04
UBAP1-201ENST00000297661 RGS1Q08116 209 aa14.78□□□□□ -0.04
UBAP1-201ENST00000297661 PCDH1Q08174 1060 aa14.78□□□□□ -0.04
UBAP1-201ENST00000297661 HNRNPA0Q13151 305 aaKnown RBP14.78□□□□□ -0.04
UBAP1-201ENST00000297661 SLBPQ14493 270 aaKnown RBP eCLIP14.78□□□□□ -0.04
UBAP1-201ENST00000297661 MPEG1Q2M385 716 aa14.78□□□□□ -0.04
UBAP1-201ENST00000297661 WSCD2Q2TBF2 565 aa14.78□□□□□ -0.04
UBAP1-201ENST00000297661 ZNF284Q2VY69 593 aa14.78□□□□□ -0.04
UBAP1-201ENST00000297661 KLHL17Q6TDP4 642 aa14.78□□□□□ -0.04
UBAP1-201ENST00000297661 PLEKHM3Q6ZWE6 761 aa14.78□□□□□ -0.04
UBAP1-201ENST00000297661 COMMD6Q7Z4G1 85 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms