RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.43■□□□□ 0.06
SSRP1-202ENST00000293880 LSM5Q9Y4Y9 91 aaKnown RBP15.43■□□□□ 0.06
SSRP1-202ENST00000293880 PHLPP1O60346 1717 aa15.43■□□□□ 0.06
SSRP1-202ENST00000293880 OXTRP30559 389 aa15.43■□□□□ 0.06
SSRP1-202ENST00000293880 ALDH3B2P48448 385 aa15.43■□□□□ 0.06
SSRP1-202ENST00000293880 NTRK2Q16620 822 aa15.43■□□□□ 0.06
SSRP1-202ENST00000293880 OR52E2Q8NGJ4 325 aa15.43■□□□□ 0.06
SSRP1-202ENST00000293880 OR56A3Q8NH54 315 aa15.43■□□□□ 0.06
SSRP1-202ENST00000293880 SETD7Q8WTS6 366 aaKnown RBP15.43■□□□□ 0.06
SSRP1-202ENST00000293880 MTG2Q9H4K7 406 aa15.43■□□□□ 0.06
SSRP1-202ENST00000293880 CRYZQ08257 329 aaKnown RBP15.43■□□□□ 0.06
SSRP1-202ENST00000293880 NKPD1Q17RQ9 610 aa15.43■□□□□ 0.06
SSRP1-202ENST00000293880 LBX2Q6XYB7 198 aa15.43■□□□□ 0.06
SSRP1-202ENST00000293880 FKBP10Q96AY3 582 aa15.43■□□□□ 0.06
SSRP1-202ENST00000293880 FUNDC2Q9BWH2 189 aa15.43■□□□□ 0.06
SSRP1-202ENST00000293880 ICKQ9UPZ9 632 aa15.43■□□□□ 0.06
SSRP1-202ENST00000293880 CD3GP09693 182 aa15.43■□□□□ 0.06
SSRP1-202ENST00000293880 SRYQ05066 204 aa15.43■□□□□ 0.06
SSRP1-202ENST00000293880 GLYATL2Q8WU03 294 aa15.43■□□□□ 0.06
SSRP1-202ENST00000293880 PTERQ96BW5 349 aa15.43■□□□□ 0.06
SSRP1-202ENST00000293880 DOHHQ9BU89 302 aa15.43■□□□□ 0.06
SSRP1-202ENST00000293880 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.43■□□□□ 0.06
SSRP1-202ENST00000293880 RXFP3Q9NSD7 469 aa15.43■□□□□ 0.06
SSRP1-202ENST00000293880 GXYLT2A0PJZ3 443 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 BCAS1O75363 584 aaPredicted RBP15.42■□□□□ 0.06
SSRP1-202ENST00000293880 SCNN1AP37088 669 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 PTH2RP49190 550 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 TMEM115Q12893 351 aaPredicted RBP15.42■□□□□ 0.06
SSRP1-202ENST00000293880 SLC9B2Q86UD5 537 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 CMASQ8NFW8 434 aaPredicted RBP15.42■□□□□ 0.06
SSRP1-202ENST00000293880 NPRL2Q8WTW4 380 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 PRSS51A0A1B0GVH4 220 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 LEFTY2O00292 366 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 SCGB1D1O95968 90 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 RAB6AP20340 208 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 POU3F4P49335 361 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 OR4D2P58180 307 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 FGL1Q08830 312 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 CRHR2Q13324 411 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 BTN1A1Q13410 526 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 PPIGQ13427 754 aaKnown RBP eCLIP15.42■□□□□ 0.063e-6■■■□□ 17.5
SSRP1-202ENST00000293880 PPA1Q15181 289 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 ENDOVQ8N8Q3 282 aaKnown RBP15.42■□□□□ 0.06
SSRP1-202ENST00000293880 SMPDL3AQ92484 453 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 ACTL8Q9H568 366 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 SCML2Q9UQR0 700 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 FRKP42685 505 aaPredicted RBP15.42■□□□□ 0.06
SSRP1-202ENST00000293880 TGM4P49221 684 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 GPM6BQ13491 265 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 PAFAH1B3Q15102 231 aaKnown RBP15.42■□□□□ 0.06
SSRP1-202ENST00000293880 AWAT2Q6E213 333 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 ZC3H14Q6PJT7 736 aaKnown RBP15.42■□□□□ 0.06
SSRP1-202ENST00000293880 NRROSQ86YC3 692 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 PROKR1Q8TCW9 393 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 PGAM5Q96HS1 289 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 CDC14AQ9UNH5 594 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 C3P01024 1663 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 UBFD1O14562 309 aaKnown RBP15.42■□□□□ 0.06
SSRP1-202ENST00000293880 TSPAN6O43657 245 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 FXYD4P59646 89 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 OR4D1Q15615 310 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 LINC00471Q8N535 108 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 KCNN1Q92952 543 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 SGIP1Q9BQI5 828 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 NLKQ9UBE8 527 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 PCTPQ9UKL6 214 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 OAS1P00973 400 aaKnown RBP15.42■□□□□ 0.06
SSRP1-202ENST00000293880 CBR1P16152 277 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 ACRV1P26436 265 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 ZNF136P52737 540 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 C6orf141Q5SZD1 244 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 LEG1Q6P5S2 330 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 FTMTQ8N4E7 242 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 MALSU1Q96EH3 234 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 PRTFDC1Q9NRG1 225 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 SMOXQ9NWM0 555 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 KLHL9Q9P2J3 617 aa15.42■□□□□ 0.06
SSRP1-202ENST00000293880 PIP5K1CO60331 668 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 SQSTM1Q13501 440 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 ZNF791Q3KP31 576 aaPredicted RBP15.41■□□□□ 0.06
SSRP1-202ENST00000293880 BRAT1Q6PJG6 821 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 CLECL1Q8IZS7 167 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 MAPK15Q8TD08 544 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 SLC35F5Q8WV83 523 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 SMOC2Q9H3U7 446 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 NFS1Q9Y697 457 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 RICTORQ6R327 1708 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 E9PI62 339 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 FAAHO00519 579 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 YY2O15391 372 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 LIPCP11150 499 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 WFIKKN2Q8TEU8 576 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 SMOQ99835 787 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 PCDHB16Q9NRJ7 776 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 TMEM248Q9NWD8 314 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 ACSL5Q9ULC5 683 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 OARD1Q9Y530 152 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 DNAJB13P59910 316 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 PLBD1Q6P4A8 553 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 TUBA1CQ9BQE3 449 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms